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The map label for this gene is tadA [C]

Identifier: 126208034

GI number: 126208034

Start: 621603

End: 622880

Strand: Reverse

Name: tadA [C]

Synonym: APL_0552

Alternate gene names: 126208034

Gene position: 622880-621603 (Counterclockwise)

Preceding gene: 126208035

Following gene: 126208033

Centisome position: 27.39

GC content: 42.18

Gene sequence:

>1278_bases
ATGCTAACAAAAGAACAACAAATATTCTTTCGTACCGAATTACTCAGTAATTTGGACGTAGAAAAACTCGATGAAATCCA
AAACGAGCGTAATAAGTTAATTGACGAATTAACTCAATCACTTTATCGCATTTCAAACCTTCACTCTATTTATCTTACAC
CGGCGGACGCCGCTTATATGGCGGGTCTTGTCGCTGATGAGATAGGCGGCTACGGTCCGATTCGCGAGTTAATGGAAGAC
GAGGGTGTAAACGATATTTTAGTTAATGGTCCGGATAATATTTGGGTCGAACGTGCCGGCATTCTTGAAAAGACGGACAA
AAAGTTTATCAATAATGAACAGCTTACCGATATAGCGAAACGATTAGTCGCTCGTGTCGGTCGTCGTATCGATGAAGGTA
TGCCGTTGGTCGATTCCCGTTTACCCGACGGTAGCCGACTGAATGTAGTTATTCAACCGATTGCTTTAGACGGAACGTCT
ATCTCAATTCGTAAATTTTCTAAATCTAAAAAATCCTTACAAGATTTAGTCAATTACGGTTCAATGACGCTCGATATGGC
TAATTTTCTGATTATTGCCGCACGTTCTCGTGTAAATATTATCGTTTCGGGCGGTACCGGTTCGGGTAAAACAACCTTAT
TAAATGCGCTCTCTCACTATATTTCTCATACCGAACGAGTGCTAACGCTTGAAGATACCGCTGAATTACGACTGGAACAA
CCTCATGTTGTCCGCTTAGAAACCCGTCTAGCCGGTGTTGAACGGACAGGTGAAATCTCGATGCAGGATCTAGTAATCAA
TGCGTTACGTATGCGTCCGGAGCGAATCATTGTCGGTGAGTGTCGTGGTGCGGAAGCATTCCAAATGCTACAAGCGATGA
ATACGGGGCATGACGGTTCAATGTCCACATTGCACGCCAATAGTCCTCGTGATGCGCTGGCTCGTTTGGAAAGTATGGTC
ATGATGTCAAACGCTTCGTTACCGTTAGAAGCGATTCGCCGAAATATCGCTTCTGCCGTCAATATTATTATTCAGGCTTC
TCGCTTAAATGACGGCTCACGTAAAGTGACCAATATTACCGAAGTAATGGGTATGGAAAACGGACAAATCGTTTTACAAG
ATATTTTCTCGTACGAACCGAGTAAATACCGAGATGAAGATAACAAAATTATCGGTCAATTTACCAATCACGGATTACTT
ACTCGTTCCGTTGTTTACCAAAATGCTCAAATGTTTAACCTGAGTGATGAACTGCAAAATATCTTTAAGGAGAAATAA

Upstream 100 bases:

>100_bases
TCGCAATGAAAGTGATTGGTACGCTTTCCAGACAAGCGGCTAAACGTAATAAAAAAATGGAAATGTCTTTCTTCCAAAAA
CTCTTTAAATAAACATTATT

Downstream 100 bases:

>100_bases
TGACGCTACTTTATTATTTCGTCTTTGCATTTGGTGTTTTACTGCTGTTATTTACCGCCTCGGCTTGGTTCAAAACACAT
AAAAAAATAAATGCTCGTGA

Product: tight adherence protein A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 425; Mature: 425

Protein sequence:

>425_residues
MLTKEQQIFFRTELLSNLDVEKLDEIQNERNKLIDELTQSLYRISNLHSIYLTPADAAYMAGLVADEIGGYGPIRELMED
EGVNDILVNGPDNIWVERAGILEKTDKKFINNEQLTDIAKRLVARVGRRIDEGMPLVDSRLPDGSRLNVVIQPIALDGTS
ISIRKFSKSKKSLQDLVNYGSMTLDMANFLIIAARSRVNIIVSGGTGSGKTTLLNALSHYISHTERVLTLEDTAELRLEQ
PHVVRLETRLAGVERTGEISMQDLVINALRMRPERIIVGECRGAEAFQMLQAMNTGHDGSMSTLHANSPRDALARLESMV
MMSNASLPLEAIRRNIASAVNIIIQASRLNDGSRKVTNITEVMGMENGQIVLQDIFSYEPSKYRDEDNKIIGQFTNHGLL
TRSVVYQNAQMFNLSDELQNIFKEK

Sequences:

>Translated_425_residues
MLTKEQQIFFRTELLSNLDVEKLDEIQNERNKLIDELTQSLYRISNLHSIYLTPADAAYMAGLVADEIGGYGPIRELMED
EGVNDILVNGPDNIWVERAGILEKTDKKFINNEQLTDIAKRLVARVGRRIDEGMPLVDSRLPDGSRLNVVIQPIALDGTS
ISIRKFSKSKKSLQDLVNYGSMTLDMANFLIIAARSRVNIIVSGGTGSGKTTLLNALSHYISHTERVLTLEDTAELRLEQ
PHVVRLETRLAGVERTGEISMQDLVINALRMRPERIIVGECRGAEAFQMLQAMNTGHDGSMSTLHANSPRDALARLESMV
MMSNASLPLEAIRRNIASAVNIIIQASRLNDGSRKVTNITEVMGMENGQIVLQDIFSYEPSKYRDEDNKIIGQFTNHGLL
TRSVVYQNAQMFNLSDELQNIFKEK
>Mature_425_residues
MLTKEQQIFFRTELLSNLDVEKLDEIQNERNKLIDELTQSLYRISNLHSIYLTPADAAYMAGLVADEIGGYGPIRELMED
EGVNDILVNGPDNIWVERAGILEKTDKKFINNEQLTDIAKRLVARVGRRIDEGMPLVDSRLPDGSRLNVVIQPIALDGTS
ISIRKFSKSKKSLQDLVNYGSMTLDMANFLIIAARSRVNIIVSGGTGSGKTTLLNALSHYISHTERVLTLEDTAELRLEQ
PHVVRLETRLAGVERTGEISMQDLVINALRMRPERIIVGECRGAEAFQMLQAMNTGHDGSMSTLHANSPRDALARLESMV
MMSNASLPLEAIRRNIASAVNIIIQASRLNDGSRKVTNITEVMGMENGQIVLQDIFSYEPSKYRDEDNKIIGQFTNHGLL
TRSVVYQNAQMFNLSDELQNIFKEK

Specific function: Unknown

COG id: COG4962

COG function: function code U; Flp pilus assembly protein, ATPase CpaF

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP E family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022399
- InterPro:   IPR001482 [H]

Pfam domain/function: PF00437 GSPII_E [H]

EC number: NA

Molecular weight: Translated: 47575; Mature: 47575

Theoretical pI: Translated: 5.37; Mature: 5.37

Prosite motif: PS00227 TUBULIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTKEQQIFFRTELLSNLDVEKLDEIQNERNKLIDELTQSLYRISNLHSIYLTPADAAYM
CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHH
AGLVADEIGGYGPIRELMEDEGVNDILVNGPDNIWVERAGILEKTDKKFINNEQLTDIAK
HHHHHHHHCCCHHHHHHHHHCCCCEEEEECCCCEEEECCCHHHHHHHHHCCCHHHHHHHH
RLVARVGRRIDEGMPLVDSRLPDGSRLNVVIQPIALDGTSISIRKFSKSKKSLQDLVNYG
HHHHHHHHHHHCCCCCHHCCCCCCCEEEEEEEEEEECCCEEEHHHHHHHHHHHHHHHHCC
SMTLDMANFLIIAARSRVNIIVSGGTGSGKTTLLNALSHYISHTERVLTLEDTAELRLEQ
CHHHHHHHEEEEEECCCEEEEEECCCCCCHHHHHHHHHHHHHHHHEEEEEECHHHHEECC
PHVVRLETRLAGVERTGEISMQDLVINALRMRPERIIVGECRGAEAFQMLQAMNTGHDGS
CCEEEEHHHHHCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCCCCC
MSTLHANSPRDALARLESMVMMSNASLPLEAIRRNIASAVNIIIQASRLNDGSRKVTNIT
CCEEECCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHH
EVMGMENGQIVLQDIFSYEPSKYRDEDNKIIGQFTNHGLLTRSVVYQNAQMFNLSDELQN
HHHCCCCCCCHHHHHHCCCCCCCCCCCCCEEHHHHCCCHHHHHHHHCCCCEECHHHHHHH
IFKEK
HHCCC
>Mature Secondary Structure
MLTKEQQIFFRTELLSNLDVEKLDEIQNERNKLIDELTQSLYRISNLHSIYLTPADAAYM
CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHH
AGLVADEIGGYGPIRELMEDEGVNDILVNGPDNIWVERAGILEKTDKKFINNEQLTDIAK
HHHHHHHHCCCHHHHHHHHHCCCCEEEEECCCCEEEECCCHHHHHHHHHCCCHHHHHHHH
RLVARVGRRIDEGMPLVDSRLPDGSRLNVVIQPIALDGTSISIRKFSKSKKSLQDLVNYG
HHHHHHHHHHHCCCCCHHCCCCCCCEEEEEEEEEEECCCEEEHHHHHHHHHHHHHHHHCC
SMTLDMANFLIIAARSRVNIIVSGGTGSGKTTLLNALSHYISHTERVLTLEDTAELRLEQ
CHHHHHHHEEEEEECCCEEEEEECCCCCCHHHHHHHHHHHHHHHHEEEEEECHHHHEECC
PHVVRLETRLAGVERTGEISMQDLVINALRMRPERIIVGECRGAEAFQMLQAMNTGHDGS
CCEEEEHHHHHCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCCCCC
MSTLHANSPRDALARLESMVMMSNASLPLEAIRRNIASAVNIIIQASRLNDGSRKVTNIT
CCEEECCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHH
EVMGMENGQIVLQDIFSYEPSKYRDEDNKIIGQFTNHGLLTRSVVYQNAQMFNLSDELQN
HHHCCCCCCCHHHHHHCCCCCCCCCCCCCEEHHHHCCCHHHHHHHHCCCCEECHHHHHHH
IFKEK
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12218036; 9634230 [H]