| Definition | Actinobacillus pleuropneumoniae serovar 5b str. L20 chromosome, complete genome. |
|---|---|
| Accession | NC_009053 |
| Length | 2,274,482 |
Click here to switch to the map view.
The map label for this gene is 126207999
Identifier: 126207999
GI number: 126207999
Start: 583157
End: 583813
Strand: Direct
Name: 126207999
Synonym: APL_0515
Alternate gene names: NA
Gene position: 583157-583813 (Clockwise)
Preceding gene: 126207998
Following gene: 126208000
Centisome position: 25.64
GC content: 41.86
Gene sequence:
>657_bases ATGGCAACACAAACCACCCCATTTCAGGGAACAAAATTTTATATTGGTACTGGCTTAAACCAAGAAAAAGCCATTACCGC TTGTACGGTAACACCTAATGCAACGATTACCGCTGCTGGTCACGGTGCTAAAGTGGGCGATTTTGTCAAAATCACCGGCT TAGGTTCACTTGATGGTTTTTATCCTGTGAAAACTGTTGCAACGGACACTTTAACGTTTGCAGATGAAGTAGATTGGACG GGGCAAGATAAACCGACGGATTTTTCAACCGCAAAATTTGCGGTCGTGAAATGGTCATCCAACTTCTGTGCGATCAAAAA CATTGAAGGCGATGGCGATACATTGAGTGAAGAAGATGTTACGACAATGTGTTCAGAAGGTACAGAAACGGAAGCGGGCG AAATTGAATACGGTTCAATTAAACTCACGTTCTTTTATGCGCCGGCTACGGCAATGCAGTCAGATCTTCGTAAGAAATTC TTCGCAAAAGAAACGTTCCCTTGGATGATGGTATTAAAAAACAAACAAGGTTCTTTATATGGTACCGGTTTCATTCAAAC CAGCCCTAACTGGAGCGGTGAAGTAAAAGGTAAATTTGAATCCGGCGTAACGATTAAAAAATCGAAACGTGATTACCATT TACCTACAACTGCGTAA
Upstream 100 bases:
>100_bases TATCCGGATATACCTATGACCAAGATGAACAACATTCGACTTGGCATATTGCAATTATCCAATTTGAAATTAACTATGAA CGTACAACAGGAGCTGATTA
Downstream 100 bases:
>100_bases TTTCCCTAAACTAGACCGCTTGTATAGGCGGTCTTATCTCTTGATCAAGGATTAAATCATGACTATTGGTACTCGTGAAT CATTATTGGCAAACAATAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 218; Mature: 217
Protein sequence:
>218_residues MATQTTPFQGTKFYIGTGLNQEKAITACTVTPNATITAAGHGAKVGDFVKITGLGSLDGFYPVKTVATDTLTFADEVDWT GQDKPTDFSTAKFAVVKWSSNFCAIKNIEGDGDTLSEEDVTTMCSEGTETEAGEIEYGSIKLTFFYAPATAMQSDLRKKF FAKETFPWMMVLKNKQGSLYGTGFIQTSPNWSGEVKGKFESGVTIKKSKRDYHLPTTA
Sequences:
>Translated_218_residues MATQTTPFQGTKFYIGTGLNQEKAITACTVTPNATITAAGHGAKVGDFVKITGLGSLDGFYPVKTVATDTLTFADEVDWT GQDKPTDFSTAKFAVVKWSSNFCAIKNIEGDGDTLSEEDVTTMCSEGTETEAGEIEYGSIKLTFFYAPATAMQSDLRKKF FAKETFPWMMVLKNKQGSLYGTGFIQTSPNWSGEVKGKFESGVTIKKSKRDYHLPTTA >Mature_217_residues ATQTTPFQGTKFYIGTGLNQEKAITACTVTPNATITAAGHGAKVGDFVKITGLGSLDGFYPVKTVATDTLTFADEVDWTG QDKPTDFSTAKFAVVKWSSNFCAIKNIEGDGDTLSEEDVTTMCSEGTETEAGEIEYGSIKLTFFYAPATAMQSDLRKKFF AKETFPWMMVLKNKQGSLYGTGFIQTSPNWSGEVKGKFESGVTIKKSKRDYHLPTTA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23680; Mature: 23549
Theoretical pI: Translated: 5.34; Mature: 5.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATQTTPFQGTKFYIGTGLNQEKAITACTVTPNATITAAGHGAKVGDFVKITGLGSLDGF CCCCCCCCCCCEEEEECCCCCCCEEEEEEECCCCEEEECCCCCCCCCEEEEEECCCCCCC YPVKTVATDTLTFADEVDWTGQDKPTDFSTAKFAVVKWSSNFCAIKNIEGDGDTLSEEDV CEEEEEEECEEEECCCCCCCCCCCCCCCCCEEEEEEEECCCEEEEEECCCCCCCCCCCHH TTMCSEGTETEAGEIEYGSIKLTFFYAPATAMQSDLRKKFFAKETFPWMMVLKNKQGSLY HHHHCCCCCCCCCCEEECEEEEEEEECCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEE GTGFIQTSPNWSGEVKGKFESGVTIKKSKRDYHLPTTA EEEEEEECCCCCCEEEEEECCCEEEEECCCCCCCCCCC >Mature Secondary Structure ATQTTPFQGTKFYIGTGLNQEKAITACTVTPNATITAAGHGAKVGDFVKITGLGSLDGF CCCCCCCCCCEEEEECCCCCCCEEEEEEECCCCEEEECCCCCCCCCEEEEEECCCCCCC YPVKTVATDTLTFADEVDWTGQDKPTDFSTAKFAVVKWSSNFCAIKNIEGDGDTLSEEDV CEEEEEEECEEEECCCCCCCCCCCCCCCCCEEEEEEEECCCEEEEEECCCCCCCCCCCHH TTMCSEGTETEAGEIEYGSIKLTFFYAPATAMQSDLRKKFFAKETFPWMMVLKNKQGSLY HHHHCCCCCCCCCCEEECEEEEEEEECCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEE GTGFIQTSPNWSGEVKGKFESGVTIKKSKRDYHLPTTA EEEEEEECCCCCCEEEEEECCCEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA