| Definition | Actinobacillus pleuropneumoniae serovar 5b str. L20 chromosome, complete genome. |
|---|---|
| Accession | NC_009053 |
| Length | 2,274,482 |
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The map label for this gene is 126207979
Identifier: 126207979
GI number: 126207979
Start: 565375
End: 566190
Strand: Reverse
Name: 126207979
Synonym: APL_0495
Alternate gene names: NA
Gene position: 566190-565375 (Counterclockwise)
Preceding gene: 126207980
Following gene: 126207978
Centisome position: 24.89
GC content: 33.82
Gene sequence:
>816_bases ATGTTACATACTCCCCTACGTTATCCTGGTGGCAAAGCCAAATTTGCTCCTATAATTAAACAGATTATTGAACAGAATAA TCTCAAAGGACACTATGTAGAACCCTACGCTGGTGGGGCTGGTGTTGCTCTGGACTTACTTTTCAGTGGGTATTGCAGTG ATATTCATATCAATGATTTAGACTTGGCCATCTTTAATTTTTGGAAATCTATTACAGAACGAACAGACGATTTTATTCGT TTAGTCAATGATACTCCTATCACGATTGAAGAGTGGCATAAACAAAAAAGTTTACTAAGAAGAGAAAATATTTCTCCACT AGAACACGGTTTTGCAGCTTTCTTTCTTAATCGAACTAATCGCTCGGGTATTTTAAAAGCTGGGGTAATTGGTGGTTTAA AACAGTCTGGGGATTATAAGTTGGATTGCCGATTCAATAAAACAGATTTGATTAAACGCATAGAGAAAATAGGTAATGTG TCCAAGAAAATTCATGTAACAAATTTTGATACAGAAAATTGGCTGCCAATAATTGATAAATTGGTGCCTTCTAATTCATT GATTTATCTTGATCCTCCTTATTATGAGAAAGGGCAAGGCTTGTATCGCAATTTTTATCAACATAAAGATCATGTGGAAG TTAAGAATCAGCTGGCCAACATAAAAACACCTTGGGTCGTATCTTATGATAATCATTCCACTATCAAAGAGATTTACCAA CAATATAGACAAGTTGAATATACTTTAAATTACTCAGCTAGTAAAAAAAGAAAAGCAACTGAAGTCATTATTTATAGTGA TAAAGTTTCTATCTAA
Upstream 100 bases:
>100_bases TTCATAATTTGGCTGATTATTATGGTATTCATACAGCGTACTGGCCACGTCTCTAATTTTAGTATAGAATGGCTCGATAC GAAATCATTAGAGAGGAAAA
Downstream 100 bases:
>100_bases CCGCCTTCGTGGCGGCTTTATTGTATCTCTCCGGCATTGATGTAGGAAACATCAAAACAAGAGGTCTAATTTCACTAAAT TTTTCCAATAAAAAAGCTAC
Product: putative DNA-methyltransferase
Products: NA
Alternate protein names: DNA-Methyltransferase; DNA Methyltransferase; Adenine-Specific DNA Methyltransferase; Cytosine-Specific DNA Methyltransferase; Site-Specific DNA Methylase; Prophage DNA Adenine Methylase; N6 Adenine-Specific DNA Methyltransferase; DNA Adenine Methylase Subfamily; Site-Specific DNA-Methyltransferase; DNA Adenine Methylase; Site-Specific DNA Methylase-Like Protein; Methylase
Number of amino acids: Translated: 271; Mature: 271
Protein sequence:
>271_residues MLHTPLRYPGGKAKFAPIIKQIIEQNNLKGHYVEPYAGGAGVALDLLFSGYCSDIHINDLDLAIFNFWKSITERTDDFIR LVNDTPITIEEWHKQKSLLRRENISPLEHGFAAFFLNRTNRSGILKAGVIGGLKQSGDYKLDCRFNKTDLIKRIEKIGNV SKKIHVTNFDTENWLPIIDKLVPSNSLIYLDPPYYEKGQGLYRNFYQHKDHVEVKNQLANIKTPWVVSYDNHSTIKEIYQ QYRQVEYTLNYSASKKRKATEVIIYSDKVSI
Sequences:
>Translated_271_residues MLHTPLRYPGGKAKFAPIIKQIIEQNNLKGHYVEPYAGGAGVALDLLFSGYCSDIHINDLDLAIFNFWKSITERTDDFIR LVNDTPITIEEWHKQKSLLRRENISPLEHGFAAFFLNRTNRSGILKAGVIGGLKQSGDYKLDCRFNKTDLIKRIEKIGNV SKKIHVTNFDTENWLPIIDKLVPSNSLIYLDPPYYEKGQGLYRNFYQHKDHVEVKNQLANIKTPWVVSYDNHSTIKEIYQ QYRQVEYTLNYSASKKRKATEVIIYSDKVSI >Mature_271_residues MLHTPLRYPGGKAKFAPIIKQIIEQNNLKGHYVEPYAGGAGVALDLLFSGYCSDIHINDLDLAIFNFWKSITERTDDFIR LVNDTPITIEEWHKQKSLLRRENISPLEHGFAAFFLNRTNRSGILKAGVIGGLKQSGDYKLDCRFNKTDLIKRIEKIGNV SKKIHVTNFDTENWLPIIDKLVPSNSLIYLDPPYYEKGQGLYRNFYQHKDHVEVKNQLANIKTPWVVSYDNHSTIKEIYQ QYRQVEYTLNYSASKKRKATEVIIYSDKVSI
Specific function: Unknown
COG id: COG0338
COG function: function code L; Site-specific DNA methylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31328; Mature: 31328
Theoretical pI: Translated: 9.49; Mature: 9.49
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLHTPLRYPGGKAKFAPIIKQIIEQNNLKGHYVEPYAGGAGVALDLLFSGYCSDIHINDL CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEECCCCCCCHHHHHHHHHCCCCCEECCHH DLAIFNFWKSITERTDDFIRLVNDTPITIEEWHKQKSLLRRENISPLEHGFAAFFLNRTN HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHEEEEEECCC RSGILKAGVIGGLKQSGDYKLDCRFNKTDLIKRIEKIGNVSKKIHVTNFDTENWLPIIDK CCCCEEHHHHCCCCCCCCEEEEEEECHHHHHHHHHHHCCCHHEEEEECCCCCCCHHHHHH LVPSNSLIYLDPPYYEKGQGLYRNFYQHKDHVEVKNQLANIKTPWVVSYDNHSTIKEIYQ HCCCCCEEEECCCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCEEEEECCCHHHHHHHH QYRQVEYTLNYSASKKRKATEVIIYSDKVSI HHHHEEEEECCCCCCCCCCEEEEEEECCCCC >Mature Secondary Structure MLHTPLRYPGGKAKFAPIIKQIIEQNNLKGHYVEPYAGGAGVALDLLFSGYCSDIHINDL CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEECCCCCCCHHHHHHHHHCCCCCEECCHH DLAIFNFWKSITERTDDFIRLVNDTPITIEEWHKQKSLLRRENISPLEHGFAAFFLNRTN HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHEEEEEECCC RSGILKAGVIGGLKQSGDYKLDCRFNKTDLIKRIEKIGNVSKKIHVTNFDTENWLPIIDK CCCCEEHHHHCCCCCCCCEEEEEEECHHHHHHHHHHHCCCHHEEEEECCCCCCCHHHHHH LVPSNSLIYLDPPYYEKGQGLYRNFYQHKDHVEVKNQLANIKTPWVVSYDNHSTIKEIYQ HCCCCCEEEECCCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCEEEEECCCHHHHHHHH QYRQVEYTLNYSASKKRKATEVIIYSDKVSI HHHHEEEEECCCCCCCCCCEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA