| Definition | Actinobacillus pleuropneumoniae serovar 5b str. L20 chromosome, complete genome. |
|---|---|
| Accession | NC_009053 |
| Length | 2,274,482 |
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The map label for this gene is 126207974
Identifier: 126207974
GI number: 126207974
Start: 559253
End: 559663
Strand: Reverse
Name: 126207974
Synonym: APL_0490
Alternate gene names: NA
Gene position: 559663-559253 (Counterclockwise)
Preceding gene: 126207975
Following gene: 126207973
Centisome position: 24.61
GC content: 33.33
Gene sequence:
>411_bases ATGATGAATGAACAGATAATAATTGATATTGATGTACTTTACCTAAAAGCAGCATCATTATTTGCAGGAAAAAATGACGT AAGACAAAATCTAAATGGTGTTTATTTTAATCTTGAAAATGGGTGCATTCAAGCAACAAACGGACACGTTGCATTTACCA CTAAGCCAAATTTGTTTGCTTCATTTCCGAAGCGCAAAGGATTCATTATGCCAAATGAGCTGATTAAGCAAATATTATTA ATTAAACCTTTTAGCAAAGAGGAAAAATTCAGAACTTTGCAAGTTGCTTATAACAAAGGAGCAATAACCGCCACACTAGG TGGTATCACAGTCCAAGGAAAAGAAATTGAAGGAAAATTCCCGAATTTGTGTGCGGTGTATCCATTAAAAGAATCCAATA ACAAAACTTAA
Upstream 100 bases:
>100_bases AATCAATTTAGAAAGTTGTTTATCTTTGGCTTGGCAAGAAATCAAGGATAGAAAAGGTCGTATGATTGATGGTGTTTTTG TGAAGGAGGAGGACTTATAA
Downstream 100 bases:
>100_bases ACATACAATGCGAATTATATTAATTTGGCGGCAAAAGCCACAAAATTACTCAAACCAATAATGGAAAAGATGCTGGAATT GATTTTAATCTCAGCGATAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 136; Mature: 136
Protein sequence:
>136_residues MMNEQIIIDIDVLYLKAASLFAGKNDVRQNLNGVYFNLENGCIQATNGHVAFTTKPNLFASFPKRKGFIMPNELIKQILL IKPFSKEEKFRTLQVAYNKGAITATLGGITVQGKEIEGKFPNLCAVYPLKESNNKT
Sequences:
>Translated_136_residues MMNEQIIIDIDVLYLKAASLFAGKNDVRQNLNGVYFNLENGCIQATNGHVAFTTKPNLFASFPKRKGFIMPNELIKQILL IKPFSKEEKFRTLQVAYNKGAITATLGGITVQGKEIEGKFPNLCAVYPLKESNNKT >Mature_136_residues MMNEQIIIDIDVLYLKAASLFAGKNDVRQNLNGVYFNLENGCIQATNGHVAFTTKPNLFASFPKRKGFIMPNELIKQILL IKPFSKEEKFRTLQVAYNKGAITATLGGITVQGKEIEGKFPNLCAVYPLKESNNKT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15170; Mature: 15170
Theoretical pI: Translated: 9.90; Mature: 9.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMNEQIIIDIDVLYLKAASLFAGKNDVRQNLNGVYFNLENGCIQATNGHVAFTTKPNLFA CCCCEEEEEEEEEEEEHHHHHCCCHHHHHCCCEEEEEECCCEEEECCCEEEEEECCCCEE SFPKRKGFIMPNELIKQILLIKPFSKEEKFRTLQVAYNKGAITATLGGITVQGKEIEGKF CCCCCCCCCCCHHHHHHHHCCCCCCCCCCEEEEEEEECCCCEEEEECCEEEECCCCCCCC PNLCAVYPLKESNNKT CCEEEEEEECCCCCCC >Mature Secondary Structure MMNEQIIIDIDVLYLKAASLFAGKNDVRQNLNGVYFNLENGCIQATNGHVAFTTKPNLFA CCCCEEEEEEEEEEEEHHHHHCCCHHHHHCCCEEEEEECCCEEEECCCEEEEEECCCCEE SFPKRKGFIMPNELIKQILLIKPFSKEEKFRTLQVAYNKGAITATLGGITVQGKEIEGKF CCCCCCCCCCCHHHHHHHHCCCCCCCCCCEEEEEEEECCCCEEEEECCEEEECCCCCCCC PNLCAVYPLKESNNKT CCEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA