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The map label for this gene is 126207972

Identifier: 126207972

GI number: 126207972

Start: 557223

End: 558263

Strand: Reverse

Name: 126207972

Synonym: APL_0488

Alternate gene names: NA

Gene position: 558263-557223 (Counterclockwise)

Preceding gene: 126207973

Following gene: 126207969

Centisome position: 24.54

GC content: 40.35

Gene sequence:

>1041_bases
ATGGCTCGACCCCGCAAACGAGAAAATAACGGTTTGCCACAAAATCTACTTTGCCGACGACGGAAACGAGCAAGCGGCCA
AATTGTTGAATACTTTTACTATGTAATGGCGGACAGTAAAGAAAAATCCCTCGGTACAAACAAATATGAAGCCGTATTGG
AAGCTGCTAAACTCAATTTTGAATTTCAGAAAAAGGGCGAAGTCGTTCTATTCATTGATGTGGCAAAACGTTATGAAGTG
GAAATTGTACCAACGAAGAAAGCGAAGAATACACGCCAATCCAATTTACAGGCGATTGGCTGGCTCTGTAAATTCTTCGG
CGATCCGCCAATCCCACTTGAAAGAATTGAACCACAGCATATCAAGCAATATCTGCAATGGCGAAAAGACACGCCTGCCG
TTGCGAATATTGAGGTCGGATTATTTAACACAATTTGGAATAGCGCAAGGGAATGGGGCTACACTTCTCTACCCAGCCCA
TCACAAGGCGTTAAAAAATTCCCAACGAAATACCGAGAAATCTATGTCGAAGATTATATACTCGAAAAAATCTACGAATT
TGCCGATGAGCGAATGGCAGATATTATCGAAACAGCCTACTTACTTGGGCAACGTCCTATTGATATTTGCAATATCCACC
GATCACATATTTATAACGGTATTTTACATATCACACAACAAAAGACAGGGAAGAAAGTCAGATTTGAAATTACCGGTAGG
TTAAAGGAAATTATAGATAAACGCCTACAACCTGAAACCACTTGGCTATTTACAAACAAATGGGGAAAAAAATTAGACCG
CCAAATACTCACGGTGCATTTTAGAGAGATCAGAGAAAAAGCGATGCGTGCTTATCCTGAATTAGCAAATGAAATTGGAA
AAGTTCAAATGCGAGATATGCGAGCCAAAGCAGCAACAGATATTTCACTGACAGCTACCGACGAGCAAGCTCAAAAGCAA
CTTGGCCATACATCAAAACGAATGACTCAACACTACATTAGAAAAGATAAACCACTCAGACCAACCGATGAAATTACATA
A

Upstream 100 bases:

>100_bases
ACGGCGAGATTATGCTTCTCGGACAAAAACCAAAAAACAAGAATCTGCTAATGAACATGATTGGATTCCAAATGTTATCA
GAACAGCATAAGGAGTTAGT

Downstream 100 bases:

>100_bases
TAAAAAAGACCCTTTTGCACTATACAAAAGAGCCTTTAAATCACTTAAAATCCGTTCCGAAACTATTTTATAAAATATTG
ATTTTATTAGCATAAAAACT

Product: phage integrase family protein

Products: NA

Alternate protein names: Phage-Related Integrase; Phage Integrase; Integrase Family Protein; Integrase; Site-Specific Recombinase Phage Integrase Family; Phage Integrase Family Site Specific Recombinase; Integrase/Recombinase; Integrase Protein; Site-Specific Recombinase; Phage IntegrasePhage Integrase N-Terminal SAM-Like

Number of amino acids: Translated: 346; Mature: 345

Protein sequence:

>346_residues
MARPRKRENNGLPQNLLCRRRKRASGQIVEYFYYVMADSKEKSLGTNKYEAVLEAAKLNFEFQKKGEVVLFIDVAKRYEV
EIVPTKKAKNTRQSNLQAIGWLCKFFGDPPIPLERIEPQHIKQYLQWRKDTPAVANIEVGLFNTIWNSAREWGYTSLPSP
SQGVKKFPTKYREIYVEDYILEKIYEFADERMADIIETAYLLGQRPIDICNIHRSHIYNGILHITQQKTGKKVRFEITGR
LKEIIDKRLQPETTWLFTNKWGKKLDRQILTVHFREIREKAMRAYPELANEIGKVQMRDMRAKAATDISLTATDEQAQKQ
LGHTSKRMTQHYIRKDKPLRPTDEIT

Sequences:

>Translated_346_residues
MARPRKRENNGLPQNLLCRRRKRASGQIVEYFYYVMADSKEKSLGTNKYEAVLEAAKLNFEFQKKGEVVLFIDVAKRYEV
EIVPTKKAKNTRQSNLQAIGWLCKFFGDPPIPLERIEPQHIKQYLQWRKDTPAVANIEVGLFNTIWNSAREWGYTSLPSP
SQGVKKFPTKYREIYVEDYILEKIYEFADERMADIIETAYLLGQRPIDICNIHRSHIYNGILHITQQKTGKKVRFEITGR
LKEIIDKRLQPETTWLFTNKWGKKLDRQILTVHFREIREKAMRAYPELANEIGKVQMRDMRAKAATDISLTATDEQAQKQ
LGHTSKRMTQHYIRKDKPLRPTDEIT
>Mature_345_residues
ARPRKRENNGLPQNLLCRRRKRASGQIVEYFYYVMADSKEKSLGTNKYEAVLEAAKLNFEFQKKGEVVLFIDVAKRYEVE
IVPTKKAKNTRQSNLQAIGWLCKFFGDPPIPLERIEPQHIKQYLQWRKDTPAVANIEVGLFNTIWNSAREWGYTSLPSPS
QGVKKFPTKYREIYVEDYILEKIYEFADERMADIIETAYLLGQRPIDICNIHRSHIYNGILHITQQKTGKKVRFEITGRL
KEIIDKRLQPETTWLFTNKWGKKLDRQILTVHFREIREKAMRAYPELANEIGKVQMRDMRAKAATDISLTATDEQAQKQL
GHTSKRMTQHYIRKDKPLRPTDEIT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40636; Mature: 40505

Theoretical pI: Translated: 10.19; Mature: 10.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARPRKRENNGLPQNLLCRRRKRASGQIVEYFYYVMADSKEKSLGTNKYEAVLEAAKLNF
CCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHCCC
EFQKKGEVVLFIDVAKRYEVEIVPTKKAKNTRQSNLQAIGWLCKFFGDPPIPLERIEPQH
EEECCCCEEEEEEECCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCHHCCCHHH
IKQYLQWRKDTPAVANIEVGLFNTIWNSAREWGYTSLPSPSQGVKKFPTKYREIYVEDYI
HHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
LEKIYEFADERMADIIETAYLLGQRPIDICNIHRSHIYNGILHITQQKTGKKVRFEITGR
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHEEHHCCCCEEEEEEHHH
LKEIIDKRLQPETTWLFTNKWGKKLDRQILTVHFREIREKAMRAYPELANEIGKVQMRDM
HHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RAKAATDISLTATDEQAQKQLGHTSKRMTQHYIRKDKPLRPTDEIT
HHHHHCCEEEEECCHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
ARPRKRENNGLPQNLLCRRRKRASGQIVEYFYYVMADSKEKSLGTNKYEAVLEAAKLNF
CCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHCCC
EFQKKGEVVLFIDVAKRYEVEIVPTKKAKNTRQSNLQAIGWLCKFFGDPPIPLERIEPQH
EEECCCCEEEEEEECCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCHHCCCHHH
IKQYLQWRKDTPAVANIEVGLFNTIWNSAREWGYTSLPSPSQGVKKFPTKYREIYVEDYI
HHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
LEKIYEFADERMADIIETAYLLGQRPIDICNIHRSHIYNGILHITQQKTGKKVRFEITGR
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHEEHHCCCCEEEEEEHHH
LKEIIDKRLQPETTWLFTNKWGKKLDRQILTVHFREIREKAMRAYPELANEIGKVQMRDM
HHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RAKAATDISLTATDEQAQKQLGHTSKRMTQHYIRKDKPLRPTDEIT
HHHHHCCEEEEECCHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA