Definition Actinobacillus pleuropneumoniae serovar 5b str. L20 chromosome, complete genome.
Accession NC_009053
Length 2,274,482

Click here to switch to the map view.

The map label for this gene is 126207956

Identifier: 126207956

GI number: 126207956

Start: 542837

End: 543121

Strand: Reverse

Name: 126207956

Synonym: APL_0472

Alternate gene names: NA

Gene position: 543121-542837 (Counterclockwise)

Preceding gene: 126207961

Following gene: 126207955

Centisome position: 23.88

GC content: 33.33

Gene sequence:

>285_bases
ATGCTGATAATCTCACATCAAATTTATTTAAAATTGATTCAAAAGCATAGACTTTCTGATCCGGAAACAGAAATTCTCGA
AGCATTTTCAAATGTAAACGGACAATTTCTAATCGACACACGTGAAGAACATTTGAGCGAACCGCCAACAGAATGGTTTA
TTGCCGAAACCAATAGGGGAATAAAACTCAAAGTCTGTTTTATTCGAAAAAATAATGATATTTACATTCGAACAGCCTAT
CGCCCAAATGCGGAAGAAATTCGAATTTACGAAAAATATAAATAG

Upstream 100 bases:

>100_bases
TTCGAGTTATATCGAAAAAATCGTTTTTGCCGATTGAAGAATAAAAGGAAAAACCTATTCTCAATTTCTCTGATTTAATT
TGTATATACAAAGGTAAAAA

Downstream 100 bases:

>100_bases
AGGTAAGTATGCAAAATATTGAAAAGTGGGAGAACAGAGAACTTGGGCAAGATGAAAAATTTGTACAACGTTCAACTCAT
ACAACACCGGAAATGCTAGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 94; Mature: 94

Protein sequence:

>94_residues
MLIISHQIYLKLIQKHRLSDPETEILEAFSNVNGQFLIDTREEHLSEPPTEWFIAETNRGIKLKVCFIRKNNDIYIRTAY
RPNAEEIRIYEKYK

Sequences:

>Translated_94_residues
MLIISHQIYLKLIQKHRLSDPETEILEAFSNVNGQFLIDTREEHLSEPPTEWFIAETNRGIKLKVCFIRKNNDIYIRTAY
RPNAEEIRIYEKYK
>Mature_94_residues
MLIISHQIYLKLIQKHRLSDPETEILEAFSNVNGQFLIDTREEHLSEPPTEWFIAETNRGIKLKVCFIRKNNDIYIRTAY
RPNAEEIRIYEKYK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11295; Mature: 11295

Theoretical pI: Translated: 7.61; Mature: 7.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIISHQIYLKLIQKHRLSDPETEILEAFSNVNGQFLIDTREEHLSEPPTEWFIAETNRG
CEEECHHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEEEECCHHHCCCCCCCEEEEECCCC
IKLKVCFIRKNNDIYIRTAYRPNAEEIRIYEKYK
EEEEEEEEEECCCEEEEEECCCCHHHEEEEEECC
>Mature Secondary Structure
MLIISHQIYLKLIQKHRLSDPETEILEAFSNVNGQFLIDTREEHLSEPPTEWFIAETNRG
CEEECHHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEEEECCHHHCCCCCCCEEEEECCCC
IKLKVCFIRKNNDIYIRTAYRPNAEEIRIYEKYK
EEEEEEEEEECCCEEEEEECCCCHHHEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA