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The map label for this gene is exbB2 [H]

Identifier: 126207566

GI number: 126207566

Start: 88211

End: 88663

Strand: Reverse

Name: exbB2 [H]

Synonym: APL_0078

Alternate gene names: 126207566

Gene position: 88663-88211 (Counterclockwise)

Preceding gene: 126207569

Following gene: 126207565

Centisome position: 3.9

GC content: 39.29

Gene sequence:

>453_bases
ATGGAACAAATGCTTGAACTTTTACAAGGTCATGTTGATTATATTATTTTAGGCTTATTACTATTAATGAGTGTTGTGTT
GGTATGGAAAATTATTGAACGCGTACTTTTCTACAAACAATTGGATGTGACCAAATATGACACGCTACAAGATTTGGAAA
TTGATACCACTCGCAATTTAACCACCATTTCCACTATCGGTGCCAACGCCCCTTATATCGGTTTATTAGGAACCGTATTA
GGGATCTTACTTACCTTCTATCATTTAGGGCATTCCGGCGGTGATATTGACGCCGCATCCATTATGGTTCACCTTTCGCT
TGCATTAAAAGCAACCGCAGCCGGTATCTTAGTCGCTATTCCGGCAATGATGTTCTACAGCGGTTTTAACCGTAAAGTGG
ATGAAAGCAAACTTAAATGGCAAGCGATTCAAGCTCGTAAAGCCAATCAATAA

Upstream 100 bases:

>100_bases
ATTACGAGTTGAATTTTCTGACTTACTTAGTATAATTGCAAACCATTTTCATTATACAGAACTCACTGTTTGCTTCTTTT
AGACTGTTTCCGAGGATTTT

Downstream 100 bases:

>100_bases
GCGGTCAAATTTCACTTATTTTTTGCAACTCAATCAGGCTTCTTATGAAAAAATTTGACGAAATTAATATTATTCCCTTT
ATCGACATTATGTTGGTATT

Product: biopolymer transport protein ExbB2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 150; Mature: 150

Protein sequence:

>150_residues
MEQMLELLQGHVDYIILGLLLLMSVVLVWKIIERVLFYKQLDVTKYDTLQDLEIDTTRNLTTISTIGANAPYIGLLGTVL
GILLTFYHLGHSGGDIDAASIMVHLSLALKATAAGILVAIPAMMFYSGFNRKVDESKLKWQAIQARKANQ

Sequences:

>Translated_150_residues
MEQMLELLQGHVDYIILGLLLLMSVVLVWKIIERVLFYKQLDVTKYDTLQDLEIDTTRNLTTISTIGANAPYIGLLGTVL
GILLTFYHLGHSGGDIDAASIMVHLSLALKATAAGILVAIPAMMFYSGFNRKVDESKLKWQAIQARKANQ
>Mature_150_residues
MEQMLELLQGHVDYIILGLLLLMSVVLVWKIIERVLFYKQLDVTKYDTLQDLEIDTTRNLTTISTIGANAPYIGLLGTVL
GILLTFYHLGHSGGDIDAASIMVHLSLALKATAAGILVAIPAMMFYSGFNRKVDESKLKWQAIQARKANQ

Specific function: Involved in the tonB-dependent energy-dependent transport of various receptor-bound substrates. Protects exbD from proteolytic degradation and functionally stabilizes tonB [H]

COG id: COG0811

COG function: function code U; Biopolymer transport proteins

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the exbB/tolQ family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002898
- InterPro:   IPR014172 [H]

Pfam domain/function: PF01618 MotA_ExbB [H]

EC number: NA

Molecular weight: Translated: 16635; Mature: 16635

Theoretical pI: Translated: 6.97; Mature: 6.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQMLELLQGHVDYIILGLLLLMSVVLVWKIIERVLFYKQLDVTKYDTLQDLEIDTTRNL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCE
TTISTIGANAPYIGLLGTVLGILLTFYHLGHSGGDIDAASIMVHLSLALKATAAGILVAI
EHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
PAMMFYSGFNRKVDESKLKWQAIQARKANQ
HHHHHHHCCCCCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MEQMLELLQGHVDYIILGLLLLMSVVLVWKIIERVLFYKQLDVTKYDTLQDLEIDTTRNL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCE
TTISTIGANAPYIGLLGTVLGILLTFYHLGHSGGDIDAASIMVHLSLALKATAAGILVAI
EHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
PAMMFYSGFNRKVDESKLKWQAIQARKANQ
HHHHHHHCCCCCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9423852 [H]