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The map label for this gene is ribF [H]

Identifier: 126207533

GI number: 126207533

Start: 51401

End: 52363

Strand: Reverse

Name: ribF [H]

Synonym: APL_0045

Alternate gene names: 126207533

Gene position: 52363-51401 (Counterclockwise)

Preceding gene: 126207538

Following gene: 126207532

Centisome position: 2.3

GC content: 42.89

Gene sequence:

>963_bases
ATGCAACTCATTCGCGGCTTATACAATTTGGCAAATCACAAAGACCTCGCAAAAGGCAGCGTTATCAGTATCGGTAATTT
TGACGGTGTTCACTTGGGACACCAAAATATTCTCGCTCGCCTATGTGATCAAGCGCTTGAGCGTAACTTACCTTCGGTCG
TGATGTTGTTTGAACCGCAGCCGAGAGAGTTTTTTGCAAATAAACAAGCAAATTCAACCGCTTGTATCGCTCCCGCTCGC
TTGATGCGTTTACGGGATAAATTAAAATATCTTGAACAAGCCGGCGTTGATTTCGTCCTTTGCGTAAGATTTAACGAACG
ATTCGCCAATTTATCGGCTGACGCTTTTATCCGCGAGTTATTAGTTAAACAATTGCGAGTGCGTTACTTAAGCGTAGGCG
ACGATTTCCGCTTCGGTGCAAACCGAACCGGTGATTTTGCCTTGTTACGTAATGCCGGATTGAAATATCGCTTTGCCGTT
GAAGACAGTCAGACATTAAATCATGCGGAACAACGTGTCAGCAGTTCTTTAATTCGAACGGCATTACAGCAAGATGATCT
CGTTTTAGCCGAAAAATTATTAGGCAAGCCTTATTCTATTTGCGGCAGAGTGGCGCATGGTAATAAGCTCGGGAGAACGA
TCGGTTTTCCGACCGCAAATATTATGCTAAACCGATTAGTTACCCCGCTACAAGGCGTATTCGCCGTACAAATTCAAACC
CAAACGGGCAGACATAACGGGATCGCTAATGTCGGAAACCGACCGACCATTAACGGCACGAAACCGTTGCTTGAAGTGCA
TATTTTTGATTTTAATCGTTCGATTTACGGCGAAGCGATAGAAGTATTTTTTATTCGTAAAATTCGTAATGAAGTCAAAT
TTCCCGACTTTGAAGCACTGAAAGCACAAATCGAAAAAGACAGAGAACAAGCGTTCGAATTTTTTAAACATTTTGCAAAC
TAG

Upstream 100 bases:

>100_bases
AAATGGTAAAATCTGCATTGCATTTGACTTTTCATTTTTGGTCGATAACCGTATAATCAACGGAATTTTCTTAAAAAAAC
GGACATTAAAAGCGGAAAAA

Downstream 100 bases:

>100_bases
CAAGTAATCGAATAATTAAACCGAATTCAAACTAAAAATTTTATTAACTGGAAAACAAACATGATTGATTACAAAAACAC
TTTAAATTTGCCTGAAACAG

Product: riboflavin biosynthesis protein

Products: NA

Alternate protein names: Riboflavin kinase; Flavokinase; FMN adenylyltransferase; FAD pyrophosphorylase; FAD synthase [H]

Number of amino acids: Translated: 320; Mature: 320

Protein sequence:

>320_residues
MQLIRGLYNLANHKDLAKGSVISIGNFDGVHLGHQNILARLCDQALERNLPSVVMLFEPQPREFFANKQANSTACIAPAR
LMRLRDKLKYLEQAGVDFVLCVRFNERFANLSADAFIRELLVKQLRVRYLSVGDDFRFGANRTGDFALLRNAGLKYRFAV
EDSQTLNHAEQRVSSSLIRTALQQDDLVLAEKLLGKPYSICGRVAHGNKLGRTIGFPTANIMLNRLVTPLQGVFAVQIQT
QTGRHNGIANVGNRPTINGTKPLLEVHIFDFNRSIYGEAIEVFFIRKIRNEVKFPDFEALKAQIEKDREQAFEFFKHFAN

Sequences:

>Translated_320_residues
MQLIRGLYNLANHKDLAKGSVISIGNFDGVHLGHQNILARLCDQALERNLPSVVMLFEPQPREFFANKQANSTACIAPAR
LMRLRDKLKYLEQAGVDFVLCVRFNERFANLSADAFIRELLVKQLRVRYLSVGDDFRFGANRTGDFALLRNAGLKYRFAV
EDSQTLNHAEQRVSSSLIRTALQQDDLVLAEKLLGKPYSICGRVAHGNKLGRTIGFPTANIMLNRLVTPLQGVFAVQIQT
QTGRHNGIANVGNRPTINGTKPLLEVHIFDFNRSIYGEAIEVFFIRKIRNEVKFPDFEALKAQIEKDREQAFEFFKHFAN
>Mature_320_residues
MQLIRGLYNLANHKDLAKGSVISIGNFDGVHLGHQNILARLCDQALERNLPSVVMLFEPQPREFFANKQANSTACIAPAR
LMRLRDKLKYLEQAGVDFVLCVRFNERFANLSADAFIRELLVKQLRVRYLSVGDDFRFGANRTGDFALLRNAGLKYRFAV
EDSQTLNHAEQRVSSSLIRTALQQDDLVLAEKLLGKPYSICGRVAHGNKLGRTIGFPTANIMLNRLVTPLQGVFAVQIQT
QTGRHNGIANVGNRPTINGTKPLLEVHIFDFNRSIYGEAIEVFFIRKIRNEVKFPDFEALKAQIEKDREQAFEFFKHFAN

Specific function: Unknown

COG id: COG0196

COG function: function code H; FAD synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribF family [H]

Homologues:

Organism=Escherichia coli, GI1786208, Length=316, Percent_Identity=52.5316455696203, Blast_Score=330, Evalue=7e-92,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004821
- InterPro:   IPR015864
- InterPro:   IPR015865
- InterPro:   IPR002606
- InterPro:   IPR014729 [H]

Pfam domain/function: PF06574 FAD_syn; PF01687 Flavokinase [H]

EC number: =2.7.1.26; =2.7.7.2 [H]

Molecular weight: Translated: 36248; Mature: 36248

Theoretical pI: Translated: 10.14; Mature: 10.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLIRGLYNLANHKDLAKGSVISIGNFDGVHLGHQNILARLCDQALERNLPSVVMLFEPQ
CHHHHHHHHHHCCCHHCCCCEEEECCCCCEECCHHHHHHHHHHHHHHCCCCCEEEEECCC
PREFFANKQANSTACIAPARLMRLRDKLKYLEQAGVDFVLCVRFNERFANLSADAFIREL
CHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECHHHHCCCHHHHHHHH
LVKQLRVRYLSVGDDFRFGANRTGDFALLRNAGLKYRFAVEDSQTLNHAEQRVSSSLIRT
HHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHH
ALQQDDLVLAEKLLGKPYSICGRVAHGNKLGRTIGFPTANIMLNRLVTPLQGVFAVQIQT
HHHCCCHHHHHHHHCCCHHHHHHHHCCCHHCCCCCCCHHHHHHHHHHHHHCCEEEEEEEE
QTGRHNGIANVGNRPTINGTKPLLEVHIFDFNRSIYGEAIEVFFIRKIRNEVKFPDFEAL
CCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCHHHH
KAQIEKDREQAFEFFKHFAN
HHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQLIRGLYNLANHKDLAKGSVISIGNFDGVHLGHQNILARLCDQALERNLPSVVMLFEPQ
CHHHHHHHHHHCCCHHCCCCEEEECCCCCEECCHHHHHHHHHHHHHHCCCCCEEEEECCC
PREFFANKQANSTACIAPARLMRLRDKLKYLEQAGVDFVLCVRFNERFANLSADAFIREL
CHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECHHHHCCCHHHHHHHH
LVKQLRVRYLSVGDDFRFGANRTGDFALLRNAGLKYRFAVEDSQTLNHAEQRVSSSLIRT
HHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHH
ALQQDDLVLAEKLLGKPYSICGRVAHGNKLGRTIGFPTANIMLNRLVTPLQGVFAVQIQT
HHHCCCHHHHHHHHCCCHHHHHHHHCCCHHCCCCCCCHHHHHHHHHHHHHCCEEEEEEEE
QTGRHNGIANVGNRPTINGTKPLLEVHIFDFNRSIYGEAIEVFFIRKIRNEVKFPDFEAL
CCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCHHHH
KAQIEKDREQAFEFFKHFAN
HHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]