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The map label for this gene is ompP2A [H]

Identifier: 126207494

GI number: 126207494

Start: 6134

End: 7264

Strand: Reverse

Name: ompP2A [H]

Synonym: APL_0006

Alternate gene names: 126207494

Gene position: 7264-6134 (Counterclockwise)

Preceding gene: 126207514

Following gene: 126207492

Centisome position: 0.32

GC content: 43.32

Gene sequence:

>1131_bases
ATGAAAAAAACAGCATTAGCCCTTTTCGCTTCTGCTTTTATGGCAAGCTCGGCATCAGCGGTTGAATTATTTAACTTAGA
TTCAACCGGTACTAAAGCGGAATTTATCGGTTCTGCTCGTTTAAAATGGACAAGTACCTCAGCCAAAGACACTTACCAAA
ACGGTGCGGCAGTTCGTAACCACGTAAATAAACCGGTACAAAATAACGGTTCACGTTTCGGTTTCCGTTTAACTCAACAA
CTCGGCAGCGGTGTTTACGCTTTAGGCCGTGTAGAATGGCGTTTACGTGGCGCAGACGAACGCGGTGTATCCAGTTCTCA
ACACGATTTAGATCATATCTATGCACATCAACTTTATGCGGGTTTAGGCCATAAACAATACGGTGAAGTGACTTACGGTA
ACCAAACGGTGATTACCGATGAAGTCAAACAAACCGATATCCCGAATACCTTAAGTTTATCTGACGGCTTATTAGTTTCC
GGCGCACGCCGTTCGGTACAATATGTGTATAAAGGTATTGAAGGCTTAAAAGTCGGTGCGTACTACGGCGGTCATAACCA
ACGCTCAAATACGAATATGGATTTAAGCCAAGATCGTAAAGACGTATGGGGTTTCGGTTCAATTTATAACCATAAATTTG
ACGACGTACAAAGCGTACAAGTGGCGACCGGTTTCTCTCGCGAGCGTTTTGAGCGTATCGGTTCGGCACCAGCTTATGAC
CGTAATGCTTATTCGGTAGGTGCGGCATATACCTATGATAAAACTACATTCGGTGTGGATTTAGAACGTCGTAAAACAGA
AAATCAATCGGTACAAGGCAACGAACGTACCGAAAAAGAAGTGCGTACCCTTGTGTACCATCGTTTAACCGATGATTGGC
GTGCATACGGTATGTACGCTTATAAAACCAATAGACTTGAACGTGCAATCGGTCGAGATAATAACGAGAAAAAACACCAA
TTTATGGTGGGTACCGAATACTATTTACCAAAAGTGGTTGATCAGTTAAAAACCAAACTTTTTGTAGAATGGCAAGCGAC
TCGTACCAAACATCCGGAAGCTAAAGTAGCTCGCGGCGTGAACAAATCACGCGACTATACGACAGTTGTCGGTTTCCGTG
CTTATTGGTAA

Upstream 100 bases:

>100_bases
ATTATAACCAATCACAATATAAACTAACAAAATCACATTGATTGAATTTTTCACCCCAAGTAAACTATAGTCTTTGATTT
ATATTTCATTTGGAGTGAAT

Downstream 100 bases:

>100_bases
TTTCATATTATCCGAAAACAACAAAGCCCAAGCATTGCTTGGGCTTTTTTATTGCAATAAATAAGCGGTCAAAATTTGCA
ATTTTTTTGCAAAACCCGAC

Product: outer membrane protein P2

Products: NA

Alternate protein names: OMP P2 [H]

Number of amino acids: Translated: 376; Mature: 376

Protein sequence:

>376_residues
MKKTALALFASAFMASSASAVELFNLDSTGTKAEFIGSARLKWTSTSAKDTYQNGAAVRNHVNKPVQNNGSRFGFRLTQQ
LGSGVYALGRVEWRLRGADERGVSSSQHDLDHIYAHQLYAGLGHKQYGEVTYGNQTVITDEVKQTDIPNTLSLSDGLLVS
GARRSVQYVYKGIEGLKVGAYYGGHNQRSNTNMDLSQDRKDVWGFGSIYNHKFDDVQSVQVATGFSRERFERIGSAPAYD
RNAYSVGAAYTYDKTTFGVDLERRKTENQSVQGNERTEKEVRTLVYHRLTDDWRAYGMYAYKTNRLERAIGRDNNEKKHQ
FMVGTEYYLPKVVDQLKTKLFVEWQATRTKHPEAKVARGVNKSRDYTTVVGFRAYW

Sequences:

>Translated_376_residues
MKKTALALFASAFMASSASAVELFNLDSTGTKAEFIGSARLKWTSTSAKDTYQNGAAVRNHVNKPVQNNGSRFGFRLTQQ
LGSGVYALGRVEWRLRGADERGVSSSQHDLDHIYAHQLYAGLGHKQYGEVTYGNQTVITDEVKQTDIPNTLSLSDGLLVS
GARRSVQYVYKGIEGLKVGAYYGGHNQRSNTNMDLSQDRKDVWGFGSIYNHKFDDVQSVQVATGFSRERFERIGSAPAYD
RNAYSVGAAYTYDKTTFGVDLERRKTENQSVQGNERTEKEVRTLVYHRLTDDWRAYGMYAYKTNRLERAIGRDNNEKKHQ
FMVGTEYYLPKVVDQLKTKLFVEWQATRTKHPEAKVARGVNKSRDYTTVVGFRAYW
>Mature_376_residues
MKKTALALFASAFMASSASAVELFNLDSTGTKAEFIGSARLKWTSTSAKDTYQNGAAVRNHVNKPVQNNGSRFGFRLTQQ
LGSGVYALGRVEWRLRGADERGVSSSQHDLDHIYAHQLYAGLGHKQYGEVTYGNQTVITDEVKQTDIPNTLSLSDGLLVS
GARRSVQYVYKGIEGLKVGAYYGGHNQRSNTNMDLSQDRKDVWGFGSIYNHKFDDVQSVQVATGFSRERFERIGSAPAYD
RNAYSVGAAYTYDKTTFGVDLERRKTENQSVQGNERTEKEVRTLVYHRLTDDWRAYGMYAYKTNRLERAIGRDNNEKKHQ
FMVGTEYYLPKVVDQLKTKLFVEWQATRTKHPEAKVARGVNKSRDYTTVVGFRAYW

Specific function: Unknown

COG id: COG3203

COG function: function code M; Outer membrane protein (porin)

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Gram-negative porin family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42529; Mature: 42529

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTALALFASAFMASSASAVELFNLDSTGTKAEFIGSARLKWTSTSAKDTYQNGAAVRN
CCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHCCCCEEEEECCCCCHHHHCCHHHHH
HVNKPVQNNGSRFGFRLTQQLGSGVYALGRVEWRLRGADERGVSSSQHDLDHIYAHQLYA
HCCCCCCCCCCEEHHHHHHHHCCCEEEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHH
GLGHKQYGEVTYGNQTVITDEVKQTDIPNTLSLSDGLLVSGARRSVQYVYKGIEGLKVGA
HCCCCCCCCEECCCEEEEECCHHHCCCCCEEECCCCEEECCHHHHHHHHHHCCCCEEEEE
YYGGHNQRSNTNMDLSQDRKDVWGFGSIYNHKFDDVQSVQVATGFSRERFERIGSAPAYD
EECCCCCCCCCCCCCCCCHHHHCCCCHHHCCCCCCCCHHHHHCCCCHHHHHHHCCCCCCC
RNAYSVGAAYTYDKTTFGVDLERRKTENQSVQGNERTEKEVRTLVYHRLTDDWRAYGMYA
CCCEEECCEEEECCEEECCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHEEEE
YKTNRLERAIGRDNNEKKHQFMVGTEYYLPKVVDQLKTKLFVEWQATRTKHPEAKVARGV
EEHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHHHEEEEEECCCCCCCHHHHHHCC
NKSRDYTTVVGFRAYW
CCCCCEEEEEEEEECC
>Mature Secondary Structure
MKKTALALFASAFMASSASAVELFNLDSTGTKAEFIGSARLKWTSTSAKDTYQNGAAVRN
CCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHCCCCEEEEECCCCCHHHHCCHHHHH
HVNKPVQNNGSRFGFRLTQQLGSGVYALGRVEWRLRGADERGVSSSQHDLDHIYAHQLYA
HCCCCCCCCCCEEHHHHHHHHCCCEEEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHH
GLGHKQYGEVTYGNQTVITDEVKQTDIPNTLSLSDGLLVSGARRSVQYVYKGIEGLKVGA
HCCCCCCCCEECCCEEEEECCHHHCCCCCEEECCCCEEECCHHHHHHHHHHCCCCEEEEE
YYGGHNQRSNTNMDLSQDRKDVWGFGSIYNHKFDDVQSVQVATGFSRERFERIGSAPAYD
EECCCCCCCCCCCCCCCCHHHHCCCCHHHCCCCCCCCHHHHHCCCCHHHHHHHCCCCCCC
RNAYSVGAAYTYDKTTFGVDLERRKTENQSVQGNERTEKEVRTLVYHRLTDDWRAYGMYA
CCCEEECCEEEECCEEECCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHEEEE
YKTNRLERAIGRDNNEKKHQFMVGTEYYLPKVVDQLKTKLFVEWQATRTKHPEAKVARGV
EEHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHHHEEEEEECCCCCCCHHHHHHCC
NKSRDYTTVVGFRAYW
CCCCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8412618 [H]