| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is mnmG [H]
Identifier: 126176558
GI number: 126176558
Start: 5120085
End: 5121974
Strand: Reverse
Name: mnmG [H]
Synonym: Sbal_4377
Alternate gene names: 126176558
Gene position: 5121974-5120085 (Counterclockwise)
Preceding gene: 126176559
Following gene: 126176557
Centisome position: 99.89
GC content: 45.34
Gene sequence:
>1890_bases ATGCATTTTCATGAACGGTTTGATGTAATTGTTGTTGGTGGTGGTCATGCCGGAACTGAAGCCGCGTTGGCAGCAGCAAG AATGGGATCAAAAACATTATTACTAACGCACAATATCGATACGTTAGGACAAATGTCATGTAATCCAGCGATCGGTGGCA TAGGCAAAGGCCACCTAGTGAAAGAAATTGACGCCTTAGGTGGTGCAATGGCGATCGCAACCGATTATGCAGGGATCCAA TTTAGAACCTTGAATTCAAGCAAAGGCCCAGCAGTACGAGCGACACGTGCACAAGCTGACCGTGCGTTGTATCGTCAAAA AATCCAAAACATATTACAAAACCAACCTAACTTACGTATTTTCCAACAAGCCGTTGATGACTTAATTGTTGAAAATCATC AAGTCGTTGGTGTAGTGACTCAAATGGGATTAGCCTTTGAATCTCCAGCCGTTGTGTTAACAACAGGCACATTCTTAAGC GGCAAAATACACATAGGGTTAGAAAACTACAGCGGTGGCCGTGCAGGCGATCCACCAGCCATTGCCTTAGCCAATCGTTT ACGTGAGTTACCGATCCGTGTGGGCCGTTTAAAAACTGGTACCCCGCCACGTATCGATGCAAACACGATCGATTTTTCTC AAATGACTGAACAAAAAGGTGATTCTCCGTTACCTGTGATGTCGTTTATGGGCGATGTCAGTCATCATCCAAAGCAGATT TCTTGCTGGATCACTCATACCAATGAAAAAACCCATGAAATTATTCGTGGTGGTTTAGATAGAAGTCCAATGTATTCAGG CGTAATCGAGGGTATTGGCCCACGTTACTGCCCATCGATTGAAGACAAGATACACCGCTTTGCGGATAAATCTTCGCATC AGATCTTTATCGAACCTGAAGGGTTAAATACCAATGAGATCTACCCTAACGGGATCTCGACCAGCTTACCTTTCGATGTA CAGCTGAATTTGGTACGTTCGATCAAGGGCATGGAAAACGCAGAAATCATGCGTCCAGGTTATGCGATCGAATATGATTA TTTCGATCCAAGAGATCTTAAAAACTCATTAGAAACCAAAGCGATCAATGGGTTATTCTTCGCTGGCCAAATAAACGGCA CAACCGGTTATGAAGAAGCCGGTGCTCAAGGTTTATTAGCGGGCATGAATGCGTCGCTGCAAGTGCAAGGCAAAGAAGCT TGGTGTCCACGTCGTGACGAAGCGTATCTTGGCGTGCTGGTTGACGATCTGTCGACTCTGGGTACCAAAGAACCGTACCG CATGTTTACTAGCCGTGCCGAATACCGTTTGTTACTCCGTGAAGATAACGCCGACATTCGCTTAACGGCAAAAGGTCGCG AACTCGGTTTAGTCGACGACGCTCGCTGGGCAGCATTTAGTGAGAAGCTAGAATCCATTGAACTTGAACTGCAAAGACTG CGTGGCCAATGGGTGCATCCAAATTCGCCTTTGATCCATGCGTTAAACCCACATTTGAATACGCCGATCTCTCGAGAAGC GTCATTTGAAGAATTACTGCGTCGTCCAGAAATGGATTACAGCAAGTTAATGCAGATCGAAGGTTTTGGTCCTGGGCTTG AAGATCCACAAGCAGCTGAACAAGTTCAGATCCAAGTGAAGTACTCTGGTTATATTCAACGCCAGCAGGAAGAGATCAAC AAAGCCGTGCGTAATGAGAACACAGGTTTACCTTTGACGCTCGATTACAAAGAAGTACCGGGCTTATCAAACGAAGTGAT TGCTAAGTTAAATAACCACAAACCAGAAACCATAGGCCAAGCGTCACGGATCTCTGGTATTACCCCTGCGGCTATTTCAA TTTTGTTGGTTCACCTCAAAAAGCGTGGCTTATTACGTAAGAGTGCGTAA
Upstream 100 bases:
>100_bases CATCTCGATCGAACAGCGTAAAATGATCATTCACCTAGGGCAAAGCAAATGCTAAAATACTCGGCTCGTACTGAGTCTCT TAGCAATTGAAGGTAGTGGC
Downstream 100 bases:
>100_bases AAGCTAGCTTAATCGCTGCTTAGGTCATAGAAGGGAAGCATTCAGGCTTCCCTTCATCGTTTTCGGGCTTCATAATAGCC TTCGCGTTCATAATCGTATC
Product: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
Products: NA
Alternate protein names: Glucose-inhibited division protein A [H]
Number of amino acids: Translated: 629; Mature: 629
Protein sequence:
>629_residues MHFHERFDVIVVGGGHAGTEAALAAARMGSKTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEIDALGGAMAIATDYAGIQ FRTLNSSKGPAVRATRAQADRALYRQKIQNILQNQPNLRIFQQAVDDLIVENHQVVGVVTQMGLAFESPAVVLTTGTFLS GKIHIGLENYSGGRAGDPPAIALANRLRELPIRVGRLKTGTPPRIDANTIDFSQMTEQKGDSPLPVMSFMGDVSHHPKQI SCWITHTNEKTHEIIRGGLDRSPMYSGVIEGIGPRYCPSIEDKIHRFADKSSHQIFIEPEGLNTNEIYPNGISTSLPFDV QLNLVRSIKGMENAEIMRPGYAIEYDYFDPRDLKNSLETKAINGLFFAGQINGTTGYEEAGAQGLLAGMNASLQVQGKEA WCPRRDEAYLGVLVDDLSTLGTKEPYRMFTSRAEYRLLLREDNADIRLTAKGRELGLVDDARWAAFSEKLESIELELQRL RGQWVHPNSPLIHALNPHLNTPISREASFEELLRRPEMDYSKLMQIEGFGPGLEDPQAAEQVQIQVKYSGYIQRQQEEIN KAVRNENTGLPLTLDYKEVPGLSNEVIAKLNNHKPETIGQASRISGITPAAISILLVHLKKRGLLRKSA
Sequences:
>Translated_629_residues MHFHERFDVIVVGGGHAGTEAALAAARMGSKTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEIDALGGAMAIATDYAGIQ FRTLNSSKGPAVRATRAQADRALYRQKIQNILQNQPNLRIFQQAVDDLIVENHQVVGVVTQMGLAFESPAVVLTTGTFLS GKIHIGLENYSGGRAGDPPAIALANRLRELPIRVGRLKTGTPPRIDANTIDFSQMTEQKGDSPLPVMSFMGDVSHHPKQI SCWITHTNEKTHEIIRGGLDRSPMYSGVIEGIGPRYCPSIEDKIHRFADKSSHQIFIEPEGLNTNEIYPNGISTSLPFDV QLNLVRSIKGMENAEIMRPGYAIEYDYFDPRDLKNSLETKAINGLFFAGQINGTTGYEEAGAQGLLAGMNASLQVQGKEA WCPRRDEAYLGVLVDDLSTLGTKEPYRMFTSRAEYRLLLREDNADIRLTAKGRELGLVDDARWAAFSEKLESIELELQRL RGQWVHPNSPLIHALNPHLNTPISREASFEELLRRPEMDYSKLMQIEGFGPGLEDPQAAEQVQIQVKYSGYIQRQQEEIN KAVRNENTGLPLTLDYKEVPGLSNEVIAKLNNHKPETIGQASRISGITPAAISILLVHLKKRGLLRKSA >Mature_629_residues MHFHERFDVIVVGGGHAGTEAALAAARMGSKTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEIDALGGAMAIATDYAGIQ FRTLNSSKGPAVRATRAQADRALYRQKIQNILQNQPNLRIFQQAVDDLIVENHQVVGVVTQMGLAFESPAVVLTTGTFLS GKIHIGLENYSGGRAGDPPAIALANRLRELPIRVGRLKTGTPPRIDANTIDFSQMTEQKGDSPLPVMSFMGDVSHHPKQI SCWITHTNEKTHEIIRGGLDRSPMYSGVIEGIGPRYCPSIEDKIHRFADKSSHQIFIEPEGLNTNEIYPNGISTSLPFDV QLNLVRSIKGMENAEIMRPGYAIEYDYFDPRDLKNSLETKAINGLFFAGQINGTTGYEEAGAQGLLAGMNASLQVQGKEA WCPRRDEAYLGVLVDDLSTLGTKEPYRMFTSRAEYRLLLREDNADIRLTAKGRELGLVDDARWAAFSEKLESIELELQRL RGQWVHPNSPLIHALNPHLNTPISREASFEELLRRPEMDYSKLMQIEGFGPGLEDPQAAEQVQIQVKYSGYIQRQQEEIN KAVRNENTGLPLTLDYKEVPGLSNEVIAKLNNHKPETIGQASRISGITPAAISILLVHLKKRGLLRKSA
Specific function: NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 [H]
COG id: COG0445
COG function: function code D; NAD/FAD-utilizing enzyme apparently involved in cell division
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MnmG family [H]
Homologues:
Organism=Homo sapiens, GI74024895, Length=632, Percent_Identity=46.6772151898734, Blast_Score=504, Evalue=1e-142, Organism=Homo sapiens, GI19882217, Length=663, Percent_Identity=44.6455505279035, Blast_Score=489, Evalue=1e-138, Organism=Homo sapiens, GI183227703, Length=672, Percent_Identity=43.8988095238095, Blast_Score=484, Evalue=1e-137, Organism=Escherichia coli, GI2367273, Length=629, Percent_Identity=75.0397456279809, Blast_Score=986, Evalue=0.0, Organism=Caenorhabditis elegans, GI17534255, Length=638, Percent_Identity=41.2225705329154, Blast_Score=473, Evalue=1e-133, Organism=Saccharomyces cerevisiae, GI6321202, Length=632, Percent_Identity=47.626582278481, Blast_Score=520, Evalue=1e-148, Organism=Drosophila melanogaster, GI24658174, Length=643, Percent_Identity=46.5007776049767, Blast_Score=515, Evalue=1e-146,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004416 - InterPro: IPR002218 - InterPro: IPR020595 [H]
Pfam domain/function: PF01134 GIDA [H]
EC number: NA
Molecular weight: Translated: 69344; Mature: 69344
Theoretical pI: Translated: 6.91; Mature: 6.91
Prosite motif: PS01280 GIDA_1 ; PS01281 GIDA_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHFHERFDVIVVGGGHAGTEAALAAARMGSKTLLLTHNIDTLGQMSCNPAIGGIGKGHLV CCCCCEEEEEEEECCCCCHHHHHHHHHCCCEEEEEEECCCCHHCCCCCCCCCCCCCCHHH KEIDALGGAMAIATDYAGIQFRTLNSSKGPAVRATRAQADRALYRQKIQNILQNQPNLRI HHHHHCCCEEEEEECCCCEEEEEECCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCHHH FQQAVDDLIVENHQVVGVVTQMGLAFESPAVVLTTGTFLSGKIHIGLENYSGGRAGDPPA HHHHHHHHHHCCCEEEEEHHHHCCEECCCEEEEEECCEEEEEEEEEEECCCCCCCCCCHH IALANRLRELPIRVGRLKTGTPPRIDANTIDFSQMTEQKGDSPLPVMSFMGDVSHHPKQI HHHHHHHHHCCHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHCCCCCEE SCWITHTNEKTHEIIRGGLDRSPMYSGVIEGIGPRYCPSIEDKIHRFADKSSHQIFIEPE EEEEEECCCHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCEEEEECC GLNTNEIYPNGISTSLPFDVQLNLVRSIKGMENAEIMRPGYAIEYDYFDPRDLKNSLETK CCCCCCCCCCCCCCCCCCEEEHHHHHHHCCCCCCEEECCCEEEEECCCCHHHHHHHHHHH AINGLFFAGQINGTTGYEEAGAQGLLAGMNASLQVQGKEAWCPRRDEAYLGVLVDDLSTL HHCCEEEEEEECCCCCCHHCCCCEEEECCCCEEEECCCCCCCCCCCCCEEEHHHHHHHHH GTKEPYRMFTSRAEYRLLLREDNADIRLTAKGRELGLVDDARWAAFSEKLESIELELQRL CCCCHHHHHHCCCCEEEEEEECCCCEEEEECCCEECCCCCHHHHHHHHHHHHHHHHHHHH RGQWVHPNSPLIHALNPHLNTPISREASFEELLRRPEMDYSKLMQIEGFGPGLEDPQAAE CCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHCCCCCCHHHHEEECCCCCCCCCCCCCC QVQIQVKYSGYIQRQQEEINKAVRNENTGLPLTLDYKEVPGLSNEVIAKLNNHKPETIGQ EEEEEEEECCHHHHHHHHHHHHHHCCCCCCCEEECHHHCCCCCHHHHHHHCCCCCHHHCC ASRISGITPAAISILLVHLKKRGLLRKSA HHHCCCCCHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MHFHERFDVIVVGGGHAGTEAALAAARMGSKTLLLTHNIDTLGQMSCNPAIGGIGKGHLV CCCCCEEEEEEEECCCCCHHHHHHHHHCCCEEEEEEECCCCHHCCCCCCCCCCCCCCHHH KEIDALGGAMAIATDYAGIQFRTLNSSKGPAVRATRAQADRALYRQKIQNILQNQPNLRI HHHHHCCCEEEEEECCCCEEEEEECCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCHHH FQQAVDDLIVENHQVVGVVTQMGLAFESPAVVLTTGTFLSGKIHIGLENYSGGRAGDPPA HHHHHHHHHHCCCEEEEEHHHHCCEECCCEEEEEECCEEEEEEEEEEECCCCCCCCCCHH IALANRLRELPIRVGRLKTGTPPRIDANTIDFSQMTEQKGDSPLPVMSFMGDVSHHPKQI HHHHHHHHHCCHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHCCCCCEE SCWITHTNEKTHEIIRGGLDRSPMYSGVIEGIGPRYCPSIEDKIHRFADKSSHQIFIEPE EEEEEECCCHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCEEEEECC GLNTNEIYPNGISTSLPFDVQLNLVRSIKGMENAEIMRPGYAIEYDYFDPRDLKNSLETK CCCCCCCCCCCCCCCCCCEEEHHHHHHHCCCCCCEEECCCEEEEECCCCHHHHHHHHHHH AINGLFFAGQINGTTGYEEAGAQGLLAGMNASLQVQGKEAWCPRRDEAYLGVLVDDLSTL HHCCEEEEEEECCCCCCHHCCCCEEEECCCCEEEECCCCCCCCCCCCCEEEHHHHHHHHH GTKEPYRMFTSRAEYRLLLREDNADIRLTAKGRELGLVDDARWAAFSEKLESIELELQRL CCCCHHHHHHCCCCEEEEEEECCCCEEEEECCCEECCCCCHHHHHHHHHHHHHHHHHHHH RGQWVHPNSPLIHALNPHLNTPISREASFEELLRRPEMDYSKLMQIEGFGPGLEDPQAAE CCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHCCCCCCHHHHEEECCCCCCCCCCCCCC QVQIQVKYSGYIQRQQEEINKAVRNENTGLPLTLDYKEVPGLSNEVIAKLNNHKPETIGQ EEEEEEEECCHHHHHHHHHHHHHHCCCCCCCEEECHHHCCCCCHHHHHHHCCCCCHHHCC ASRISGITPAAISILLVHLKKRGLLRKSA HHHCCCCCHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA