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The map label for this gene is 126176529

Identifier: 126176529

GI number: 126176529

Start: 5088875

End: 5089966

Strand: Reverse

Name: 126176529

Synonym: Sbal_4348

Alternate gene names: NA

Gene position: 5089966-5088875 (Counterclockwise)

Preceding gene: 126176530

Following gene: 126176528

Centisome position: 99.27

GC content: 39.38

Gene sequence:

>1092_bases
ATGATTTTTGAAGCTTTAAATGAAGTTGCAGATGAAATTAGAGAGTCATTCAGTCCAACGCCTGATGAAGATATTCCATA
TATTGGGTTAGAGCATGTGTCACAACAAACATTGCAACTTCTTGGCAAGGGGAGTTCACTTAATGTTGAAAGCAATAAAT
ACAAATTTAAAAAAGGTGACATTCTATTTGGAACACTTAGGCCTTATTTCCGAAAGGTGACAATTGCTCCATTTGACGGA
GTTTGTTCAACTGAATATAGCGTAATTCGGCCTAAAAAAGCGGATTATACAAATTTTGTCTTTTATTTTTTAGCGAATGA
GAAATTTATTGAGTATGCCACTACTAATTCAGTAGGGGCGAGACCTAGAACTAAATGGAAATTGTTCTCTGATTACAAAG
TTCGTAAAACTAGAAATCAAGAAAAATTTGATATTGGTTTTAAACTCCGTGCTCTAGATGACCTTATCGAAAACAACCGC
CGCCGTATTCAATTGCTTGAAGAATCTGCTCGCCTGCTGTATCAAGAATGGTTTGTTCACCTGCGCTTCCCGGGTCACGA
GCTAGTTAAAGTTATTGATGGTGTTCCGGAGGGGTGGGAAAAGAAACCAATTAAGCAAATCGCAACACTCAATTATGGCA
AAGCTCTGAAAGCCGAAGTGCGTATTCCTGGACCATTTCCTGTTTATGGCTCAAGTGGTGAAGTTGGAAGCCACGAAAAA
GCCTTGGTAAAAGGGCCTGGCATTGTCGTTGGAAGAAAAGGCAATGTGGGGAGCATCTTTTGGGTCAACACTGACTTTTA
CCCTATTGATACGGTGTATTTTATTTCCGCTGAAGAAAGCAGTTTATTCCTATATCACGCGCTGCAAAATGTTCAGTTTA
TTAATACAGATGTTGCTGTGCCGGGGTTAAATCGCGATATGGCTTACAGCCGAGAAATTCTTATCCCTGATCACAAAAAC
TATCAGCGCTTTTTGTCAGAGGTTCAACCAATACAAAAACAAATTAATAACTTACAGGACTACAACAATAAGCTTGCTCA
AGCTCGAGACTTGTTACTACCTAAACTAATGAGCGGCGAACTGACCGTGTAA

Upstream 100 bases:

>100_bases
AAGAAGCCCTGCACGATATTCATATTGAGCTACAAGGCTTAAATACGGAAGCTATAGAATTGGCCGAGAAGATTGCTCGT
AACTTTGAGGAGTTAGGTGC

Downstream 100 bases:

>100_bases
TCAAAGGACTGATGAAATGAATAGAGATCAAGCTAAGCTCCACCTGCAAACTGCTTTGGCAAATACTGACGCCGATTTCC
GTGATGGCCAATGGGAAGCG

Product: restriction modification system DNA specificity subunit

Products: NA

Alternate protein names: Restriction System DNA Specificity Subunit; Type I Restriction- System Specificity Subunit; Restriction System DNA Specificity Domain; Type I Restriction- System S Subunit; Type I Restriction- System Endonuclease S Subunit; Type I Restriction S Protein; Type I Restriction DNA Specificity Domain Protein; Type I Site-Specific Deoxyribonuclease; Polypeptide HsdS; Xin-Antitoxin System Toxin Component; Type I Restriction System Specificity Subunit; Type I Restriction- Subunit S; Type I Restriction EcoEI Specificity Protein; Type I Restriction EcoDI Specificity Protein; Type I Restriction-; Type I Restriction System Specificity Protein; Type I Restriction- System; HsdS Type I Site-Specific Deoxyribonuclease; Type I Restriction Specificity Subunit; Type I Restriction- System Specificity Determinant; Type I Restriction- System Specificity Determinant Protein; Type I Restriction- S Subunit; Restriction System Type I; Type I Restriction- System DNA Specificity Subunit; Type I Restriction Ecocificity Protein; Specificity Determinant HsdS-Like; Type I Restriction/ Specificity Protein; Restriction Endonuclease S Subunits-Like Protein; Type I Restriction- System Specificity Protein; Type I Restriction Specificity Protein; Type I Restriction Partial; Specificity Protein S

Number of amino acids: Translated: 363; Mature: 363

Protein sequence:

>363_residues
MIFEALNEVADEIRESFSPTPDEDIPYIGLEHVSQQTLQLLGKGSSLNVESNKYKFKKGDILFGTLRPYFRKVTIAPFDG
VCSTEYSVIRPKKADYTNFVFYFLANEKFIEYATTNSVGARPRTKWKLFSDYKVRKTRNQEKFDIGFKLRALDDLIENNR
RRIQLLEESARLLYQEWFVHLRFPGHELVKVIDGVPEGWEKKPIKQIATLNYGKALKAEVRIPGPFPVYGSSGEVGSHEK
ALVKGPGIVVGRKGNVGSIFWVNTDFYPIDTVYFISAEESSLFLYHALQNVQFINTDVAVPGLNRDMAYSREILIPDHKN
YQRFLSEVQPIQKQINNLQDYNNKLAQARDLLLPKLMSGELTV

Sequences:

>Translated_363_residues
MIFEALNEVADEIRESFSPTPDEDIPYIGLEHVSQQTLQLLGKGSSLNVESNKYKFKKGDILFGTLRPYFRKVTIAPFDG
VCSTEYSVIRPKKADYTNFVFYFLANEKFIEYATTNSVGARPRTKWKLFSDYKVRKTRNQEKFDIGFKLRALDDLIENNR
RRIQLLEESARLLYQEWFVHLRFPGHELVKVIDGVPEGWEKKPIKQIATLNYGKALKAEVRIPGPFPVYGSSGEVGSHEK
ALVKGPGIVVGRKGNVGSIFWVNTDFYPIDTVYFISAEESSLFLYHALQNVQFINTDVAVPGLNRDMAYSREILIPDHKN
YQRFLSEVQPIQKQINNLQDYNNKLAQARDLLLPKLMSGELTV
>Mature_363_residues
MIFEALNEVADEIRESFSPTPDEDIPYIGLEHVSQQTLQLLGKGSSLNVESNKYKFKKGDILFGTLRPYFRKVTIAPFDG
VCSTEYSVIRPKKADYTNFVFYFLANEKFIEYATTNSVGARPRTKWKLFSDYKVRKTRNQEKFDIGFKLRALDDLIENNR
RRIQLLEESARLLYQEWFVHLRFPGHELVKVIDGVPEGWEKKPIKQIATLNYGKALKAEVRIPGPFPVYGSSGEVGSHEK
ALVKGPGIVVGRKGNVGSIFWVNTDFYPIDTVYFISAEESSLFLYHALQNVQFINTDVAVPGLNRDMAYSREILIPDHKN
YQRFLSEVQPIQKQINNLQDYNNKLAQARDLLLPKLMSGELTV

Specific function: Unknown

COG id: COG0732

COG function: function code V; Restriction endonuclease S subunits

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41646; Mature: 41646

Theoretical pI: Translated: 9.16; Mature: 9.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFEALNEVADEIRESFSPTPDEDIPYIGLEHVSQQTLQLLGKGSSLNVESNKYKFKKGD
CHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEECCC
ILFGTLRPYFRKVTIAPFDGVCSTEYSVIRPKKADYTNFVFYFLANEKFIEYATTNSVGA
EEEECCCCHHHEEEECCCCCCCCCCCEEECCCCCCCCEEEEEEEECCEEEEEECCCCCCC
RPRTKWKLFSDYKVRKTRNQEKFDIGFKLRALDDLIENNRRRIQLLEESARLLYQEWFVH
CCCCCEEEECCEEHHHCCCCCCEECCEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEEE
LRFPGHELVKVIDGVPEGWEKKPIKQIATLNYGKALKAEVRIPGPFPVYGSSGEVGSHEK
EECCHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCC
ALVKGPGIVVGRKGNVGSIFWVNTDFYPIDTVYFISAEESSLFLYHALQNVQFINTDVAV
EEEECCCEEEECCCCCCEEEEEECCCEEECEEEEEECCCCCEEEEEHHCCCEEEECCEEC
PGLNRDMAYSREILIPDHKNYQRFLSEVQPIQKQINNLQDYNNKLAQARDLLLPKLMSGE
CCCCCCHHCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
LTV
CCC
>Mature Secondary Structure
MIFEALNEVADEIRESFSPTPDEDIPYIGLEHVSQQTLQLLGKGSSLNVESNKYKFKKGD
CHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEECCC
ILFGTLRPYFRKVTIAPFDGVCSTEYSVIRPKKADYTNFVFYFLANEKFIEYATTNSVGA
EEEECCCCHHHEEEECCCCCCCCCCCEEECCCCCCCCEEEEEEEECCEEEEEECCCCCCC
RPRTKWKLFSDYKVRKTRNQEKFDIGFKLRALDDLIENNRRRIQLLEESARLLYQEWFVH
CCCCCEEEECCEEHHHCCCCCCEECCEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEEE
LRFPGHELVKVIDGVPEGWEKKPIKQIATLNYGKALKAEVRIPGPFPVYGSSGEVGSHEK
EECCHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCC
ALVKGPGIVVGRKGNVGSIFWVNTDFYPIDTVYFISAEESSLFLYHALQNVQFINTDVAV
EEEECCCEEEECCCCCCEEEEEECCCEEECEEEEEECCCCCEEEEEHHCCCEEEECCEEC
PGLNRDMAYSREILIPDHKNYQRFLSEVQPIQKQINNLQDYNNKLAQARDLLLPKLMSGE
CCCCCCHHCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
LTV
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA