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The map label for this gene is smf [H]

Identifier: 126176527

GI number: 126176527

Start: 5085449

End: 5086762

Strand: Reverse

Name: smf [H]

Synonym: Sbal_4346

Alternate gene names: 126176527

Gene position: 5086762-5085449 (Counterclockwise)

Preceding gene: 126176528

Following gene: 126176526

Centisome position: 99.21

GC content: 44.6

Gene sequence:

>1314_bases
ATGAATTTATCGCCAACGGCTCAAGCAACATTACTACTTACTTGTTATTTTTCCAAAGCGAGTAACGAAAATGCTAAACC
CCTTACAAATGCTGAATGGGGCCGTTTTGCGTTATGGCTAAAAGAAAAATCTACAAGCCCGGCTGATTTGTTGGGAGCAG
ATCCTTACGCTTTACTCAGTGGTTGGCATGATGATCGCGTTAGTGCAGAGCGGATTATGCAATTGCTCAATCGCGGCCAC
AGTCTAGCCTTAGCAGTAGAAAAATGGCAGAGGGCTGGCCTCTGGGTGGTTACACGTTCTGATCCTGAATATCCAAAACG
CTTAAAACAACGGTTGAAGACCGCTTCCCCTCCTGTACTGTTTGGTTGTGGTAATAAGGCATTACTGAACGAGGGTGGTT
TGGCCGTAATTGGTTCTCGAAATGCCAGCGATGACGATTTGTTTTTTACTCAGCAAGTTGGTGCTAAAGCTGCGAGTGAA
GGTGTCGCGATTGTTTCCGGTGGCGCTCGTGGGGTTGATGAAACGGCTATGCTAGGAGCAATGCAGCAAGGTGGATTTGT
AATAGGTATTATGGCAGACAGCTTATTGAAAGCGGCGACGAGTGCTAAGTGGCGCAAAGGCTTAATGGATAATAATGCTG
TGCTGATTTCGCCATTTTATCCGGAAGCCGGATTTAATGCTGGTAATGCCATGGCGCGCAATAAATATATTTACTGCTTA
GCTGACAGCTCCCTTGTTATTCATTCTGGTAAAAAAGGTGGAACACTTAACGGAGCAGAAGAAAACCTGAAAAAGGCATG
GGTACCGCTGTGGATTAAACCAACCACAGATAAGGACGCGGCCAATGCTGATTTGGTGGTTAAAGGGGGCCAATGGTTAG
AGACCGAACTTCAAAGTTTGGTGGTTGCTGATTTGATGAAAAATGAAGGCAACCAGATGAGCCCTCCTAAAGAAATACAG
GCAGATTTATTTTCAATGCCGGCAGAGTCTGGATTGTTTACTGAGCCTGAGCCAGAAAAGGTTGATTCTTATACTGAGCA
CGATATTGCACATGCTGAACAACAAGCAGATAAAGAGAGTCTCTCTGCGCACATTGTTGAAATAGAACCAGCATCAAACC
CTATCGATTTTTACCAATTGTTCATTGCAGAGCTTAATAGGCTTGCTAAAGATGCTGTCTCTGTCGATGAACTAATTGAA
GGCACAGGGCTGCACAAGTCGCAGCTAAATGAGTGGTTGAAACGCGCTGAGGAAGACGGTTTAGTGAATAAGCTTAATCG
GCCCGTACGTTATCAATTCGAAAACAAAAAATAA

Upstream 100 bases:

>100_bases
ATTCTGGTTGGACGCTGACCGTTATATCAGCATTATTACAACAAGCAGGTAGCGGTGTAGTGTATCCCGTGGCACTTGCT
TCCTCTTCGGTGAAAGACTC

Downstream 100 bases:

>100_bases
AAGGATTTAGCCATGGCGATGACAGAAGATACTCTGGTTCAACAAGTAACAGCCGATTACTTATTAAATGAATTACAGTG
GGATGCCTCTGTCATGGGCA

Product: hypothetical protein

Products: NA

Alternate protein names: DNA-processing chain A [H]

Number of amino acids: Translated: 437; Mature: 437

Protein sequence:

>437_residues
MNLSPTAQATLLLTCYFSKASNENAKPLTNAEWGRFALWLKEKSTSPADLLGADPYALLSGWHDDRVSAERIMQLLNRGH
SLALAVEKWQRAGLWVVTRSDPEYPKRLKQRLKTASPPVLFGCGNKALLNEGGLAVIGSRNASDDDLFFTQQVGAKAASE
GVAIVSGGARGVDETAMLGAMQQGGFVIGIMADSLLKAATSAKWRKGLMDNNAVLISPFYPEAGFNAGNAMARNKYIYCL
ADSSLVIHSGKKGGTLNGAEENLKKAWVPLWIKPTTDKDAANADLVVKGGQWLETELQSLVVADLMKNEGNQMSPPKEIQ
ADLFSMPAESGLFTEPEPEKVDSYTEHDIAHAEQQADKESLSAHIVEIEPASNPIDFYQLFIAELNRLAKDAVSVDELIE
GTGLHKSQLNEWLKRAEEDGLVNKLNRPVRYQFENKK

Sequences:

>Translated_437_residues
MNLSPTAQATLLLTCYFSKASNENAKPLTNAEWGRFALWLKEKSTSPADLLGADPYALLSGWHDDRVSAERIMQLLNRGH
SLALAVEKWQRAGLWVVTRSDPEYPKRLKQRLKTASPPVLFGCGNKALLNEGGLAVIGSRNASDDDLFFTQQVGAKAASE
GVAIVSGGARGVDETAMLGAMQQGGFVIGIMADSLLKAATSAKWRKGLMDNNAVLISPFYPEAGFNAGNAMARNKYIYCL
ADSSLVIHSGKKGGTLNGAEENLKKAWVPLWIKPTTDKDAANADLVVKGGQWLETELQSLVVADLMKNEGNQMSPPKEIQ
ADLFSMPAESGLFTEPEPEKVDSYTEHDIAHAEQQADKESLSAHIVEIEPASNPIDFYQLFIAELNRLAKDAVSVDELIE
GTGLHKSQLNEWLKRAEEDGLVNKLNRPVRYQFENKK
>Mature_437_residues
MNLSPTAQATLLLTCYFSKASNENAKPLTNAEWGRFALWLKEKSTSPADLLGADPYALLSGWHDDRVSAERIMQLLNRGH
SLALAVEKWQRAGLWVVTRSDPEYPKRLKQRLKTASPPVLFGCGNKALLNEGGLAVIGSRNASDDDLFFTQQVGAKAASE
GVAIVSGGARGVDETAMLGAMQQGGFVIGIMADSLLKAATSAKWRKGLMDNNAVLISPFYPEAGFNAGNAMARNKYIYCL
ADSSLVIHSGKKGGTLNGAEENLKKAWVPLWIKPTTDKDAANADLVVKGGQWLETELQSLVVADLMKNEGNQMSPPKEIQ
ADLFSMPAESGLFTEPEPEKVDSYTEHDIAHAEQQADKESLSAHIVEIEPASNPIDFYQLFIAELNRLAKDAVSVDELIE
GTGLHKSQLNEWLKRAEEDGLVNKLNRPVRYQFENKK

Specific function: Essential for efficient chromosomal DNA transformation but not required for plasmid transformation [H]

COG id: COG0758

COG function: function code LU; Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the smf family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003488 [H]

Pfam domain/function: PF02481 DNA_processg_A [H]

EC number: NA

Molecular weight: Translated: 47756; Mature: 47756

Theoretical pI: Translated: 5.36; Mature: 5.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLSPTAQATLLLTCYFSKASNENAKPLTNAEWGRFALWLKEKSTSPADLLGADPYALLS
CCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHCCCCCHHHHC
GWHDDRVSAERIMQLLNRGHSLALAVEKWQRAGLWVVTRSDPEYPKRLKQRLKTASPPVL
CCCCCCCCHHHHHHHHHCCCEEEEEEHHHHHCCEEEEECCCCHHHHHHHHHHHCCCCCEE
FGCGNKALLNEGGLAVIGSRNASDDDLFFTQQVGAKAASEGVAIVSGGARGVDETAMLGA
EECCCHHEECCCCEEEEECCCCCCCCEEEHHHHCCHHHHCCEEEEECCCCCCCHHHHHHH
MQQGGFVIGIMADSLLKAATSAKWRKGLMDNNAVLISPFYPEAGFNAGNAMARNKYIYCL
HHCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEE
ADSSLVIHSGKKGGTLNGAEENLKKAWVPLWIKPTTDKDAANADLVVKGGQWLETELQSL
ECCEEEEECCCCCCCCCCHHHHHHHCCCEEEEECCCCCCCCCCCEEEECCCHHHHHHHHH
VVADLMKNEGNQMSPPKEIQADLFSMPAESGLFTEPEPEKVDSYTEHDIAHAEQQADKES
HHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHCHHC
LSAHIVEIEPASNPIDFYQLFIAELNRLAKDAVSVDELIEGTGLHKSQLNEWLKRAEEDG
CCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCHHHHHHHHHHHHCCC
LVNKLNRPVRYQFENKK
HHHHCCCCEEEEECCCC
>Mature Secondary Structure
MNLSPTAQATLLLTCYFSKASNENAKPLTNAEWGRFALWLKEKSTSPADLLGADPYALLS
CCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHCCCCCHHHHC
GWHDDRVSAERIMQLLNRGHSLALAVEKWQRAGLWVVTRSDPEYPKRLKQRLKTASPPVL
CCCCCCCCHHHHHHHHHCCCEEEEEEHHHHHCCEEEEECCCCHHHHHHHHHHHCCCCCEE
FGCGNKALLNEGGLAVIGSRNASDDDLFFTQQVGAKAASEGVAIVSGGARGVDETAMLGA
EECCCHHEECCCCEEEEECCCCCCCCEEEHHHHCCHHHHCCEEEEECCCCCCCHHHHHHH
MQQGGFVIGIMADSLLKAATSAKWRKGLMDNNAVLISPFYPEAGFNAGNAMARNKYIYCL
HHCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEE
ADSSLVIHSGKKGGTLNGAEENLKKAWVPLWIKPTTDKDAANADLVVKGGQWLETELQSL
ECCEEEEECCCCCCCCCCHHHHHHHCCCEEEEECCCCCCCCCCCEEEECCCHHHHHHHHH
VVADLMKNEGNQMSPPKEIQADLFSMPAESGLFTEPEPEKVDSYTEHDIAHAEQQADKES
HHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHCHHC
LSAHIVEIEPASNPIDFYQLFIAELNRLAKDAVSVDELIEGTGLHKSQLNEWLKRAEEDG
CCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCHHHHHHHHHHHHCCC
LVNKLNRPVRYQFENKK
HHHHCCCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7768823; 7542800 [H]