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The map label for this gene is 126176523

Identifier: 126176523

GI number: 126176523

Start: 5079791

End: 5080276

Strand: Reverse

Name: 126176523

Synonym: Sbal_4342

Alternate gene names: NA

Gene position: 5080276-5079791 (Counterclockwise)

Preceding gene: 126176526

Following gene: 126176519

Centisome position: 99.08

GC content: 41.56

Gene sequence:

>486_bases
ATGATGCAAAATCCGTTACGCACTGATTATCAAGAACACTACGAAAAACTTGTTAGAGAATACAATCAGGAAAAAGATCG
CGTTGTAATTGAGAAGACATTTGAGGCGCTCATAAAGTTCAATGAAGAACTTTCGCATGAAGAAAAACGTGCGCTTAGGG
AAGGGGTGGACGAAGAGTCCCTAGTGTTGTTTGACTTACTGAGCAAGCCAAATTTGAAACCTCGAGAGATAGCGAAGATT
AAACAAATAGCGACGGCTTTATTGTCGACACTTAAGGCTGAGCGACTTAAAGTTGCGAACTGGCAGCAGAAAGAATCATC
GCGGGATGCGGTAAAGCAGCAGATTTATGATTTTCTTTATGACGAGAGAACGGGACTGCCTATTGAGCAGTACGAAGAAG
ATGAAATTTCCGATATTACGGATAGAGTGTTTCTACATATCTATCGGGCTTATCCAGAATTGCCATCGCCCATATATAGT
ACGTGA

Upstream 100 bases:

>100_bases
AAGAACTCCCTTAGAATCTTTGTCCAGAATGTATCAGATCAACCGGCCATTCTAATTGTCGCTGAACCGGTCAGGGTAAT
TGTCGCGCAATACTCGCTTA

Downstream 100 bases:

>100_bases
TATTGGTTTGTTAACAACTTTATTGTGATGTTTATGTTGGGGTTATTCCTTTGGGCCCTAAAAGTTAACAACTTTATTTT
TATTGGATATAATCGCGATC

Product: HsdR family type I site-specific deoxyribonuclease

Products: NA

Alternate protein names: Type I Site-Specific Deoxyribonuclease HsdR Family; Type I Restriction R Protein; Type I Restriction- System Restriction Subunit; Type I Site-Specific Deoxyribonuclease HsdR

Number of amino acids: Translated: 161; Mature: 161

Protein sequence:

>161_residues
MMQNPLRTDYQEHYEKLVREYNQEKDRVVIEKTFEALIKFNEELSHEEKRALREGVDEESLVLFDLLSKPNLKPREIAKI
KQIATALLSTLKAERLKVANWQQKESSRDAVKQQIYDFLYDERTGLPIEQYEEDEISDITDRVFLHIYRAYPELPSPIYS
T

Sequences:

>Translated_161_residues
MMQNPLRTDYQEHYEKLVREYNQEKDRVVIEKTFEALIKFNEELSHEEKRALREGVDEESLVLFDLLSKPNLKPREIAKI
KQIATALLSTLKAERLKVANWQQKESSRDAVKQQIYDFLYDERTGLPIEQYEEDEISDITDRVFLHIYRAYPELPSPIYS
T
>Mature_161_residues
MMQNPLRTDYQEHYEKLVREYNQEKDRVVIEKTFEALIKFNEELSHEEKRALREGVDEESLVLFDLLSKPNLKPREIAKI
KQIATALLSTLKAERLKVANWQQKESSRDAVKQQIYDFLYDERTGLPIEQYEEDEISDITDRVFLHIYRAYPELPSPIYS
T

Specific function: Unknown

COG id: COG0610

COG function: function code V; Type I site-specific restriction-modification system, R (restriction) subunit and related helicases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19182; Mature: 19182

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMQNPLRTDYQEHYEKLVREYNQEKDRVVIEKTFEALIKFNEELSHEEKRALREGVDEES
CCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCHH
LVLFDLLSKPNLKPREIAKIKQIATALLSTLKAERLKVANWQQKESSRDAVKQQIYDFLY
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
DERTGLPIEQYEEDEISDITDRVFLHIYRAYPELPSPIYST
HCCCCCCHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MMQNPLRTDYQEHYEKLVREYNQEKDRVVIEKTFEALIKFNEELSHEEKRALREGVDEES
CCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCHH
LVLFDLLSKPNLKPREIAKIKQIATALLSTLKAERLKVANWQQKESSRDAVKQQIYDFLY
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
DERTGLPIEQYEEDEISDITDRVFLHIYRAYPELPSPIYST
HCCCCCCHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA