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The map label for this gene is nsrR [H]

Identifier: 126176517

GI number: 126176517

Start: 5069422

End: 5069877

Strand: Reverse

Name: nsrR [H]

Synonym: Sbal_4336

Alternate gene names: 126176517

Gene position: 5069877-5069422 (Counterclockwise)

Preceding gene: 126176518

Following gene: 126176512

Centisome position: 98.88

GC content: 44.52

Gene sequence:

>456_bases
ATGCAGTTAACTCGTTATACCGATTTTGGCGTTCGTACCTTGATGTATTTGGCGGTTCAGCCAGACAGAACCACTTTATT
TAGAATTGCTGAAATTACGCAGGTATTTGATCTGTCTCCAAATCATGTCTCTAAGATAGTGCATCATTTAGGCAAGATGG
GTTACCTCGAAACCATTCGCGGTAAGATGGGCGGTTTCCGTTTGGGTAAGCCTGCGAGTGAGATTAACTTAGGTCAGTTA
GTTCGGGTGTTAGAGAACTCGTTGGCGCCGATTGATTGCAGCAAACCTTACTGCCGATTCACGCCTGCCTGTAAGTTGAA
AGGCGTGTTAGCACAAGCAGTTGAAGCGTATTTGAATGTGCTCGATCAATATACTCTGTTGGACATTGTGAGTAATCGTG
ATGAGTTACTTGCCTTGCTGCCTGACATGTCTATCTCAGTGTTACAGCTGGATTAG

Upstream 100 bases:

>100_bases
TCGGAAGATGTATGTGGTCATTCGAACGAAGAGGCGCTTTGGTTGATAACCCAACTCGAAGCTCAAACCTCTCATTAAGT
TTATCGCTGACAGGTGAAAT

Downstream 100 bases:

>100_bases
TTCCATTTTTGTGTGCAATGCCGATGGGGAGTAAGCTTGATGCAGGTACTAGATCAATCCCCTCGGTTTTTAGTCTTTGT
AGATTGGCCTTTAAGAAGCG

Product: BadM/Rrf2 family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 151; Mature: 151

Protein sequence:

>151_residues
MQLTRYTDFGVRTLMYLAVQPDRTTLFRIAEITQVFDLSPNHVSKIVHHLGKMGYLETIRGKMGGFRLGKPASEINLGQL
VRVLENSLAPIDCSKPYCRFTPACKLKGVLAQAVEAYLNVLDQYTLLDIVSNRDELLALLPDMSISVLQLD

Sequences:

>Translated_151_residues
MQLTRYTDFGVRTLMYLAVQPDRTTLFRIAEITQVFDLSPNHVSKIVHHLGKMGYLETIRGKMGGFRLGKPASEINLGQL
VRVLENSLAPIDCSKPYCRFTPACKLKGVLAQAVEAYLNVLDQYTLLDIVSNRDELLALLPDMSISVLQLD
>Mature_151_residues
MQLTRYTDFGVRTLMYLAVQPDRTTLFRIAEITQVFDLSPNHVSKIVHHLGKMGYLETIRGKMGGFRLGKPASEINLGQL
VRVLENSLAPIDCSKPYCRFTPACKLKGVLAQAVEAYLNVLDQYTLLDIVSNRDELLALLPDMSISVLQLD

Specific function: Nitric oxide-sensitive repressor of genes involved in protecting the cell against nitrosative stress. May require iron for activity [H]

COG id: COG1959

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH rrf2-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790621, Length=140, Percent_Identity=47.1428571428571, Blast_Score=136, Evalue=5e-34,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000944
- InterPro:   IPR011991 [H]

Pfam domain/function: PF02082 Rrf2 [H]

EC number: NA

Molecular weight: Translated: 16941; Mature: 16941

Theoretical pI: Translated: 8.05; Mature: 8.05

Prosite motif: PS01332 UPF0074

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLTRYTDFGVRTLMYLAVQPDRTTLFRIAEITQVFDLSPNHVSKIVHHLGKMGYLETIR
CCCCCCCHHHHHHHHHHEECCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHH
GKMGGFRLGKPASEINLGQLVRVLENSLAPIDCSKPYCRFTPACKLKGVLAQAVEAYLNV
HHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
LDQYTLLDIVSNRDELLALLPDMSISVLQLD
HHHHHHHHHHCCHHHHHHHCCCCCEEEEEEC
>Mature Secondary Structure
MQLTRYTDFGVRTLMYLAVQPDRTTLFRIAEITQVFDLSPNHVSKIVHHLGKMGYLETIR
CCCCCCCHHHHHHHHHHEECCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHH
GKMGGFRLGKPASEINLGQLVRVLENSLAPIDCSKPYCRFTPACKLKGVLAQAVEAYLNV
HHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
LDQYTLLDIVSNRDELLALLPDMSISVLQLD
HHHHHHHHHHCCHHHHHHHCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA