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The map label for this gene is gpsA [H]

Identifier: 126176510

GI number: 126176510

Start: 5062249

End: 5063265

Strand: Reverse

Name: gpsA [H]

Synonym: Sbal_4329

Alternate gene names: 126176510

Gene position: 5063265-5062249 (Counterclockwise)

Preceding gene: 126176511

Following gene: 126176509

Centisome position: 98.75

GC content: 50.93

Gene sequence:

>1017_bases
ATGAAAAACTCTGCCGATATCACGGTATTAGGGGCGGGCTCTTATGGCACCGCCCTTGCCATTTCTTTAGCCAGCAACGG
TCATAAGACCTTGTTATGGGGACACGATCCTGTCCACATGCAAACGCTCGCTCAAGACAAGTGCAACCAAGCGTTTTTGC
CTGGTATTGCGTTTCCTGATTGTTTACAGATCGAAGCCGATTTAGCCAAAGCCTTAGCTGCCAGTAACAATGTGTTAGTG
GTAGTACCAAGCCATGTGTTTGGTACTGTGCTTGAGCAAGCTAAACCGTTACTCCGTAGCGATGCGCGCATCGTATGGGC
AACGAAAGGGCTCGAGCCTGAAACCGGACGTTTGCTGCAAGATGTGGCCCGTGATGTGTTAGGTGAGCAATATCCGCTGG
CGGTGTTATCTGGGCCGACCTTCGCGAAAGAATTAGCCATGGGTTTACCTACGGCCATTTCGGTTGCGGGGACTTGTCCT
ACGTTCACCAACTATCTCGTCGAGCTGTTACACAGCCCTAAACGTTTGCGGGTTTACGCCAACGACGACTTTACCGGACT
GCAACTTGGCGGCGCGGTAAAGAACGTGATCGCGATTGGTGCGGGCATGTCCGACGGTATCGGCTTTGGTGCCAATGCCA
GAACAGCCCTGATCACCCGTGGTTTAGTTGAGTTAACTCGTTTAGGCGAAGCCTTAGGTGCTAATGCGGCCACTTTTATG
GGCATGGCGGGGTTAGGCGACTTAGTGTTGACCTGTACCGATAACCAATCCCGTAACCGTCGTTTCGGTTTAGCCTTAGG
TAAAGGCTGTGATGTGATGACAGCACAGGCTGAAATCGGCCAAGTGGTTGAAGGTTATCGCAATACCAAAGAAGTGTTTA
CGCTTGCGAAACGCCTTGGGGTTGAAATGCCAATCACTGAGCAGATTTACCAAGTCTTGTACCAAGGTAAATCGCCCGTC
GATGCTGCGAAAGAATTGCTCAGCAGAGAAAAGAAATCAGAAACGCCCGCGCAATAA

Upstream 100 bases:

>100_bases
TTAGCGCCAGTTAACTTCGACGCGCTGTTTGCCCAATACGTGCAACAACGTCAAGCTGCTGCTACTGCACCAGCTGCCGA
AGAAGCTAACGCTTAATTAC

Downstream 100 bases:

>100_bases
ACCGCGAGCCGTGATGATGCTGAATAAAGGAAAGGGTGCTAAAATAGCGCCCTTTTTTGTGCCTAACGTTTGAGCTTATC
TTTGCTCCGTTTAGGAACTG

Product: NAD(P)H-dependent glycerol-3-phosphate dehydrogenase

Products: NA

Alternate protein names: NAD(P)H-dependent glycerol-3-phosphate dehydrogenase [H]

Number of amino acids: Translated: 338; Mature: 338

Protein sequence:

>338_residues
MKNSADITVLGAGSYGTALAISLASNGHKTLLWGHDPVHMQTLAQDKCNQAFLPGIAFPDCLQIEADLAKALAASNNVLV
VVPSHVFGTVLEQAKPLLRSDARIVWATKGLEPETGRLLQDVARDVLGEQYPLAVLSGPTFAKELAMGLPTAISVAGTCP
TFTNYLVELLHSPKRLRVYANDDFTGLQLGGAVKNVIAIGAGMSDGIGFGANARTALITRGLVELTRLGEALGANAATFM
GMAGLGDLVLTCTDNQSRNRRFGLALGKGCDVMTAQAEIGQVVEGYRNTKEVFTLAKRLGVEMPITEQIYQVLYQGKSPV
DAAKELLSREKKSETPAQ

Sequences:

>Translated_338_residues
MKNSADITVLGAGSYGTALAISLASNGHKTLLWGHDPVHMQTLAQDKCNQAFLPGIAFPDCLQIEADLAKALAASNNVLV
VVPSHVFGTVLEQAKPLLRSDARIVWATKGLEPETGRLLQDVARDVLGEQYPLAVLSGPTFAKELAMGLPTAISVAGTCP
TFTNYLVELLHSPKRLRVYANDDFTGLQLGGAVKNVIAIGAGMSDGIGFGANARTALITRGLVELTRLGEALGANAATFM
GMAGLGDLVLTCTDNQSRNRRFGLALGKGCDVMTAQAEIGQVVEGYRNTKEVFTLAKRLGVEMPITEQIYQVLYQGKSPV
DAAKELLSREKKSETPAQ
>Mature_338_residues
MKNSADITVLGAGSYGTALAISLASNGHKTLLWGHDPVHMQTLAQDKCNQAFLPGIAFPDCLQIEADLAKALAASNNVLV
VVPSHVFGTVLEQAKPLLRSDARIVWATKGLEPETGRLLQDVARDVLGEQYPLAVLSGPTFAKELAMGLPTAISVAGTCP
TFTNYLVELLHSPKRLRVYANDDFTGLQLGGAVKNVIAIGAGMSDGIGFGANARTALITRGLVELTRLGEALGANAATFM
GMAGLGDLVLTCTDNQSRNRRFGLALGKGCDVMTAQAEIGQVVEGYRNTKEVFTLAKRLGVEMPITEQIYQVLYQGKSPV
DAAKELLSREKKSETPAQ

Specific function: De novo phospholipid biosynthesis; glycerol-3 phosphate formation. [C]

COG id: COG0240

COG function: function code C; Glycerol-3-phosphate dehydrogenase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI33695088, Length=338, Percent_Identity=27.2189349112426, Blast_Score=123, Evalue=2e-28,
Organism=Homo sapiens, GI24307999, Length=344, Percent_Identity=26.453488372093, Blast_Score=114, Evalue=1e-25,
Organism=Escherichia coli, GI1790037, Length=337, Percent_Identity=72.700296735905, Blast_Score=502, Evalue=1e-143,
Organism=Caenorhabditis elegans, GI32564399, Length=339, Percent_Identity=25.3687315634218, Blast_Score=101, Evalue=6e-22,
Organism=Caenorhabditis elegans, GI193210136, Length=348, Percent_Identity=25, Blast_Score=97, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI32564403, Length=348, Percent_Identity=25, Blast_Score=97, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI17507425, Length=342, Percent_Identity=24.8538011695906, Blast_Score=96, Evalue=3e-20,
Organism=Caenorhabditis elegans, GI193210134, Length=212, Percent_Identity=26.8867924528302, Blast_Score=77, Evalue=1e-14,
Organism=Saccharomyces cerevisiae, GI6320181, Length=341, Percent_Identity=27.5659824046921, Blast_Score=103, Evalue=4e-23,
Organism=Saccharomyces cerevisiae, GI6324513, Length=344, Percent_Identity=26.453488372093, Blast_Score=101, Evalue=2e-22,
Organism=Drosophila melanogaster, GI17136202, Length=343, Percent_Identity=24.7813411078717, Blast_Score=92, Evalue=3e-19,
Organism=Drosophila melanogaster, GI17136204, Length=343, Percent_Identity=24.7813411078717, Blast_Score=92, Evalue=4e-19,
Organism=Drosophila melanogaster, GI17136200, Length=343, Percent_Identity=24.7813411078717, Blast_Score=92, Evalue=4e-19,
Organism=Drosophila melanogaster, GI22026922, Length=350, Percent_Identity=21.7142857142857, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI45551945, Length=265, Percent_Identity=24.5283018867925, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI281362270, Length=265, Percent_Identity=24.5283018867925, Blast_Score=69, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008927
- InterPro:   IPR013328
- InterPro:   IPR006168
- InterPro:   IPR006109
- InterPro:   IPR011128
- InterPro:   IPR016040 [H]

Pfam domain/function: PF07479 NAD_Gly3P_dh_C; PF01210 NAD_Gly3P_dh_N [H]

EC number: =1.1.1.94 [H]

Molecular weight: Translated: 35837; Mature: 35837

Theoretical pI: Translated: 7.02; Mature: 7.02

Prosite motif: PS00957 NAD_G3PDH

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNSADITVLGAGSYGTALAISLASNGHKTLLWGHDPVHMQTLAQDKCNQAFLPGIAFPD
CCCCCCEEEEECCCCCCEEEEEEECCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCH
CLQIEADLAKALAASNNVLVVVPSHVFGTVLEQAKPLLRSDARIVWATKGLEPETGRLLQ
HHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHH
DVARDVLGEQYPLAVLSGPTFAKELAMGLPTAISVAGTCPTFTNYLVELLHSPKRLRVYA
HHHHHHCCCCCCEEEECCCHHHHHHHHCCCCHHEECCCCHHHHHHHHHHHCCCCEEEEEE
NDDFTGLQLGGAVKNVIAIGAGMSDGIGFGANARTALITRGLVELTRLGEALGANAATFM
CCCCCCEEHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHH
GMAGLGDLVLTCTDNQSRNRRFGLALGKGCDVMTAQAEIGQVVEGYRNTKEVFTLAKRLG
HHCCCCCEEEEECCCCCCCCEEEEEECCCCCEEECHHHHHHHHHHHCCHHHHHHHHHHHC
VEMPITEQIYQVLYQGKSPVDAAKELLSREKKSETPAQ
CCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKNSADITVLGAGSYGTALAISLASNGHKTLLWGHDPVHMQTLAQDKCNQAFLPGIAFPD
CCCCCCEEEEECCCCCCEEEEEEECCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCH
CLQIEADLAKALAASNNVLVVVPSHVFGTVLEQAKPLLRSDARIVWATKGLEPETGRLLQ
HHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHH
DVARDVLGEQYPLAVLSGPTFAKELAMGLPTAISVAGTCPTFTNYLVELLHSPKRLRVYA
HHHHHHCCCCCCEEEECCCHHHHHHHHCCCCHHEECCCCHHHHHHHHHHHCCCCEEEEEE
NDDFTGLQLGGAVKNVIAIGAGMSDGIGFGANARTALITRGLVELTRLGEALGANAATFM
CCCCCCEEHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHH
GMAGLGDLVLTCTDNQSRNRRFGLALGKGCDVMTAQAEIGQVVEGYRNTKEVFTLAKRLG
HHCCCCCEEEEECCCCCCCCEEEEEECCCCCEEECHHHHHHHHHHHCCHHHHHHHHHHHC
VEMPITEQIYQVLYQGKSPVDAAKELLSREKKSETPAQ
CCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA