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The map label for this gene is ycjM [C]

Identifier: 126176473

GI number: 126176473

Start: 5024517

End: 5025995

Strand: Direct

Name: ycjM [C]

Synonym: Sbal_4288

Alternate gene names: 126176473

Gene position: 5024517-5025995 (Clockwise)

Preceding gene: 126176466

Following gene: 126176474

Centisome position: 97.99

GC content: 49.7

Gene sequence:

>1479_bases
ATGAAAAACCAAGTGCAACTGATCACCTATGTCGACAGAATTACCAATGCAGGGCTCAAAGAGCTCAAAGCGCTGCTCGA
TGACGAGTTGCAAGGTCTATTCGGCGGCGTACATCTTTTGCCTTTCTATTTCCCCATTGACGGCAGCGATGCGGGCTTCG
ATCCAATAGACCATGTGCAAGTCGATTCACGCTTAGGCAATTGGGATGACGTTAAACACATTGGTGATGACTACGACATC
ATGGCCGACCTTATCGTTAACCACATGTCCGCCGAATCACCAGAATTTAAAGACGTGCTCAAGCACGGCAAACAATCGGC
TTACTGGGATTTATTTTTAACCAAAGACAAGGTATTTCCTGAGGGGTTAAGCGAGCAAGATCAAGCCGCTATCTATCGTC
CGCGTCCGGGCAGTTGTTTTAGCACTTACACCTTAGCCGATGGCTCGACCGAAGAGTTTTGGACCACCTTTACCCGCAAT
CAAATCGATATCGACGTTCATTCCGCCGCGGGTAAAGATTATTTAAACCGAGTGCTGGCGCGTTTCGACCACAGTAAAGT
GAATCTGATCCGCTTAGATGCTGCGGGTTATGCAATTAAAAAGCCCGGCACTAGCTGCTTTATGATTGAAGAGTCCTTCG
AGTTCGTGGATAAGTTAGCTAAGCAAGCCAATGCGTTAGGTATGACAACGCTGGCCGAAATTCATTCGCACCACATGACT
CAGGTCGAGATCGCCAAGCGGGTCGACATGGTGTACGACTTCGCCCTGCCACCGCTCATCTTGCACACGCTGTTTAGCCA
AGATTGCCAAGCCTTGACCCATTGGCTGGAAATGGCGCCGCGCAACTGCATCACCGTACTCGACACCCACGACGGCATCG
GCATTATCGACGTCGGCCCTATGGATGGCTTGCGCGGATTATTGACCGAAAATCAAATCGATAATCTGGTTGAAACCATA
CATGGCAACAGTAAGGGCGAGAGTCTACAAGCCACAGGCGCGGCCGCCAGCAACGTCGATTTGTATCAAATCAACTGCAC
CTATTACGATGCCCTCGGTCAGAATGACCTAGATTATTTGATGGCGCGGGCGATTCAGTTTTTCGCACCCGGTATTCCGC
AGGTGTATTACGCGGGTCTGCTGGCGATTCCAAACGATATGGATCTGCTCAACAACACCCATGTCGGTCGCGATATCAAT
CGCCCTTACTTGAACCGTGAAAAAGTGCAGCAAGCTATGCAGAAACCTGTCGTTAAGGCGCTAACTCAGCTGATTAAACT
GCGTAATAGCAGCCCAGCCTTCGATGGCCGCTTTACGATGGCATCAGCAGAACGCACGTTAACTTTATCTTGGACAGCGG
CCGAGGCTCAGGCGAGTCTCACCCTCGACTTTGCCAATAAAGATGGCCAAATCATCCTTTTAGATAAGCAAGGTAAAGAG
ACACAAGTGTCGTTATCAAGACTGCTGGCTCAAGCATAA

Upstream 100 bases:

>100_bases
GGTTAAATATACAACTTAATCGATTAAGTTTAGTTGTACAATCAATTAAAGATTGCCATAAACCATTACTCTAAAAAGAC
AACTCAAGCGTGGGCAAAGT

Downstream 100 bases:

>100_bases
GCTTGCGTTCCTGTTCGGGCTTGAGCTTAGGTTTAAGTTCAAGCTAAGCGGCATAGTGTTGAGATAGCAAAAAGGCGCAT
TCATTGCGCCTTTTTTAGTT

Product: sucrose phosphorylase

Products: NA

Alternate protein names: Sucrose glucosyltransferase [H]

Number of amino acids: Translated: 492; Mature: 492

Protein sequence:

>492_residues
MKNQVQLITYVDRITNAGLKELKALLDDELQGLFGGVHLLPFYFPIDGSDAGFDPIDHVQVDSRLGNWDDVKHIGDDYDI
MADLIVNHMSAESPEFKDVLKHGKQSAYWDLFLTKDKVFPEGLSEQDQAAIYRPRPGSCFSTYTLADGSTEEFWTTFTRN
QIDIDVHSAAGKDYLNRVLARFDHSKVNLIRLDAAGYAIKKPGTSCFMIEESFEFVDKLAKQANALGMTTLAEIHSHHMT
QVEIAKRVDMVYDFALPPLILHTLFSQDCQALTHWLEMAPRNCITVLDTHDGIGIIDVGPMDGLRGLLTENQIDNLVETI
HGNSKGESLQATGAAASNVDLYQINCTYYDALGQNDLDYLMARAIQFFAPGIPQVYYAGLLAIPNDMDLLNNTHVGRDIN
RPYLNREKVQQAMQKPVVKALTQLIKLRNSSPAFDGRFTMASAERTLTLSWTAAEAQASLTLDFANKDGQIILLDKQGKE
TQVSLSRLLAQA

Sequences:

>Translated_492_residues
MKNQVQLITYVDRITNAGLKELKALLDDELQGLFGGVHLLPFYFPIDGSDAGFDPIDHVQVDSRLGNWDDVKHIGDDYDI
MADLIVNHMSAESPEFKDVLKHGKQSAYWDLFLTKDKVFPEGLSEQDQAAIYRPRPGSCFSTYTLADGSTEEFWTTFTRN
QIDIDVHSAAGKDYLNRVLARFDHSKVNLIRLDAAGYAIKKPGTSCFMIEESFEFVDKLAKQANALGMTTLAEIHSHHMT
QVEIAKRVDMVYDFALPPLILHTLFSQDCQALTHWLEMAPRNCITVLDTHDGIGIIDVGPMDGLRGLLTENQIDNLVETI
HGNSKGESLQATGAAASNVDLYQINCTYYDALGQNDLDYLMARAIQFFAPGIPQVYYAGLLAIPNDMDLLNNTHVGRDIN
RPYLNREKVQQAMQKPVVKALTQLIKLRNSSPAFDGRFTMASAERTLTLSWTAAEAQASLTLDFANKDGQIILLDKQGKE
TQVSLSRLLAQA
>Mature_492_residues
MKNQVQLITYVDRITNAGLKELKALLDDELQGLFGGVHLLPFYFPIDGSDAGFDPIDHVQVDSRLGNWDDVKHIGDDYDI
MADLIVNHMSAESPEFKDVLKHGKQSAYWDLFLTKDKVFPEGLSEQDQAAIYRPRPGSCFSTYTLADGSTEEFWTTFTRN
QIDIDVHSAAGKDYLNRVLARFDHSKVNLIRLDAAGYAIKKPGTSCFMIEESFEFVDKLAKQANALGMTTLAEIHSHHMT
QVEIAKRVDMVYDFALPPLILHTLFSQDCQALTHWLEMAPRNCITVLDTHDGIGIIDVGPMDGLRGLLTENQIDNLVETI
HGNSKGESLQATGAAASNVDLYQINCTYYDALGQNDLDYLMARAIQFFAPGIPQVYYAGLLAIPNDMDLLNNTHVGRDIN
RPYLNREKVQQAMQKPVVKALTQLIKLRNSSPAFDGRFTMASAERTLTLSWTAAEAQASLTLDFANKDGQIILLDKQGKE
TQVSLSRLLAQA

Specific function: Unknown

COG id: COG0366

COG function: function code G; Glycosidases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sucrose phosphorylase family [H]

Homologues:

Organism=Escherichia coli, GI87081873, Length=468, Percent_Identity=31.6239316239316, Blast_Score=203, Evalue=3e-53,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006047
- InterPro:   IPR017853
- InterPro:   IPR013781
- InterPro:   IPR016377
- InterPro:   IPR022527 [H]

Pfam domain/function: PF00128 Alpha-amylase [H]

EC number: =2.4.1.7 [H]

Molecular weight: Translated: 54852; Mature: 54852

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNQVQLITYVDRITNAGLKELKALLDDELQGLFGGVHLLPFYFPIDGSDAGFDPIDHVQ
CCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCHHEE
VDSRLGNWDDVKHIGDDYDIMADLIVNHMSAESPEFKDVLKHGKQSAYWDLFLTKDKVFP
HHCCCCCHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCEEEEEEECCCCCC
EGLSEQDQAAIYRPRPGSCFSTYTLADGSTEEFWTTFTRNQIDIDVHSAAGKDYLNRVLA
CCCCCCCCCEEECCCCCCCEEEEEECCCCCHHHHHHHCCCEEEEEEECCCCHHHHHHHHH
RFDHSKVNLIRLDAAGYAIKKPGTSCFMIEESFEFVDKLAKQANALGMTTLAEIHSHHMT
HCCCCCEEEEEEECCCEEEECCCCEEEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCH
QVEIAKRVDMVYDFALPPLILHTLFSQDCQALTHWLEMAPRNCITVLDTHDGIGIIDVGP
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEECCC
MDGLRGLLTENQIDNLVETIHGNSKGESLQATGAAASNVDLYQINCTYYDALGQNDLDYL
CHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCEEEEEEEEEEECCCCCCHHHH
MARAIQFFAPGIPQVYYAGLLAIPNDMDLLNNTHVGRDINRPYLNREKVQQAMQKPVVKA
HHHHHHHHCCCCCHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
LTQLIKLRNSSPAFDGRFTMASAERTLTLSWTAAEAQASLTLDFANKDGQIILLDKQGKE
HHHHHHHCCCCCCCCCEEEEECCCEEEEEEEEECCCCEEEEEEEECCCCEEEEEECCCCH
TQVSLSRLLAQA
HHHHHHHHHHCC
>Mature Secondary Structure
MKNQVQLITYVDRITNAGLKELKALLDDELQGLFGGVHLLPFYFPIDGSDAGFDPIDHVQ
CCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCHHEE
VDSRLGNWDDVKHIGDDYDIMADLIVNHMSAESPEFKDVLKHGKQSAYWDLFLTKDKVFP
HHCCCCCHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCEEEEEEECCCCCC
EGLSEQDQAAIYRPRPGSCFSTYTLADGSTEEFWTTFTRNQIDIDVHSAAGKDYLNRVLA
CCCCCCCCCEEECCCCCCCEEEEEECCCCCHHHHHHHCCCEEEEEEECCCCHHHHHHHHH
RFDHSKVNLIRLDAAGYAIKKPGTSCFMIEESFEFVDKLAKQANALGMTTLAEIHSHHMT
HCCCCCEEEEEEECCCEEEECCCCEEEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCH
QVEIAKRVDMVYDFALPPLILHTLFSQDCQALTHWLEMAPRNCITVLDTHDGIGIIDVGP
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEECCC
MDGLRGLLTENQIDNLVETIHGNSKGESLQATGAAASNVDLYQINCTYYDALGQNDLDYL
CHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCEEEEEEEEEEECCCCCCHHHH
MARAIQFFAPGIPQVYYAGLLAIPNDMDLLNNTHVGRDINRPYLNREKVQQAMQKPVVKA
HHHHHHHHCCCCCHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
LTQLIKLRNSSPAFDGRFTMASAERTLTLSWTAAEAQASLTLDFANKDGQIILLDKQGKE
HHHHHHHCCCCCCCCCEEEEECCCEEEEEEEEECCCCEEEEEEEECCCCEEEEEECCCCH
TQVSLSRLLAQA
HHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8012038 [H]