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The map label for this gene is yuaR [C]

Identifier: 126176463

GI number: 126176463

Start: 5006411

End: 5008033

Strand: Direct

Name: yuaR [C]

Synonym: Sbal_4278

Alternate gene names: 126176463

Gene position: 5006411-5008033 (Clockwise)

Preceding gene: 126176454

Following gene: 126176464

Centisome position: 97.64

GC content: 51.94

Gene sequence:

>1623_bases
ATGATAGATAGCATGACACACAGGAAGTTAAGCAACACCGCTCAACGCCCTTCGCCAACTCGGCCACGGCATGGCGCTAA
TGCCACATGGCGCATGTTAAGCGTCAGCGCACTTATGCTGGCGATGGCAAGTACGGCGACGTGGGCGAGTGATGTAAAAA
GCCAACAGACACAAGCGGCTGATATAGCTAGGAACATGGCTAATAACACCGACACTTGTTATGTGGAAGGCGTATCCGAT
CGCCTAAACTGCGGTTTTGTGACTGTGCCAGAAAACCCTAACAAACCCGATGGCAAACAGATCCAAGTGCATTACGTCGT
TTTGCCCGCGGTGAAAAACGTCAACCATGAAGAAGCCTTGCTCGCCATTGCTGGCGGCCCAGGACAATCGGCCATAGACA
ATGCCGCGGGTTTCGATGCCATGCTGAGCAAAGTCCGCCAACAGCGGGATATCTTGCTGATCGACCAAAGGGGCACAGGC
CGTTCGAATCTGCTGACCTGCGATGAAGGCGCGCAATCTCCACTGTCATTCGATGATGACAATGCCGACACTTTAGCCGA
AACCCAAAAATGCTTAGCCAAAATCGATGCTGACGTCACTCAATACGGTAGCCTCAATGCGATTAAAGACTTCGAAGCTG
TGCGTCAGCATTTAGGCTACAAAAAACTGCATATTTACGGCATCTCCTACGGCACTCGTATGGCGCAGCTTTACATGCGT
TTATACCCAGCACACTTAGCCACAGTGACCTTAGATGGCATAGTGCCGATGCAACAAAGCGTGTTAGAAATCGGCGCGTC
GATTGATCGAGGCTTTGATTTACTCTTTAAGGATTGCCAAGAAACCACCGCTTGTCATGCCCAGTTCCCTGAGCTTAAAG
CCGAATTCGACCAAGTCGCGGCCTCACTCGCCAAAGCGCCTGTGATGGAAAACGTCTACGACCCAGTCACGGGTGAAAAG
ACTATGCTGACTATGACGCGCGGTAAGTTCTACGGCTCCATCCGCATGGCGCTGTATCAAGCCAATGTGCGCGCCTTAGT
GCCCCATGCGATTCATCAAGCCGCGAAACACAACTTCCAACCCATACTCGGTTTGTATTCCCTCACTACCGACAATGCTG
GCATGGCGATGGGTATGCACGCATCCGTGGTTTGTGGCGAAGATATGCCCCGTATTACGCCCGCCATGCGCGAGCAGGCT
CAGCATTCCTTTATGGGAAAAACTATGCTCGAAGGTTTAGAAGCCACATGTGAAGTATGGAAAGTCCCCGCGGTCGATGA
CAGTTTTAGCGAGCCCATCAGCAGCGATATTCCGACCTTGTTGTTATCCGGCGAAATCGACCCTGCCACACCACCGAGTT
GGGGCGAGTTAGCGATGGAAAAACTCACCAATGCCAAGCACTTTGTCGCTCCCTATGCGACCCACGGCGTGGCCTATCAA
TCCTGTGCCAATAACCTTATCGCCGATCTCGTTCGCTCGGGTTCCGTTAAGGATCTCGACGGCGAATGTTTAAAGAAAGA
TGTGCGCCGCAGCTTTTATTTAAATGCCAGCTCGGTAGAACCGCTTGATGCGACCAGCACAAAAACAACAGATGATAACG
CCAGCACTGGGGCCAAGGAGTAA

Upstream 100 bases:

>100_bases
CTAACATTAGCCTCTACACACTGTATTAATACATTGATACACCGATACACTGGTAGTTAAATTAACACACTCGTCCTGAA
ATGCAAAAAGGAAAGCGCGC

Downstream 100 bases:

>100_bases
GCCATGATCAAAGTATCCAATCTTTCCAAGCGCATCGGTGACGTGCAGGCGCTCAATGACTTAAGCTTCGTCGCACAAAA
CGGCCAAATCACAGGATTGC

Product: TAP domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 540; Mature: 540

Protein sequence:

>540_residues
MIDSMTHRKLSNTAQRPSPTRPRHGANATWRMLSVSALMLAMASTATWASDVKSQQTQAADIARNMANNTDTCYVEGVSD
RLNCGFVTVPENPNKPDGKQIQVHYVVLPAVKNVNHEEALLAIAGGPGQSAIDNAAGFDAMLSKVRQQRDILLIDQRGTG
RSNLLTCDEGAQSPLSFDDDNADTLAETQKCLAKIDADVTQYGSLNAIKDFEAVRQHLGYKKLHIYGISYGTRMAQLYMR
LYPAHLATVTLDGIVPMQQSVLEIGASIDRGFDLLFKDCQETTACHAQFPELKAEFDQVAASLAKAPVMENVYDPVTGEK
TMLTMTRGKFYGSIRMALYQANVRALVPHAIHQAAKHNFQPILGLYSLTTDNAGMAMGMHASVVCGEDMPRITPAMREQA
QHSFMGKTMLEGLEATCEVWKVPAVDDSFSEPISSDIPTLLLSGEIDPATPPSWGELAMEKLTNAKHFVAPYATHGVAYQ
SCANNLIADLVRSGSVKDLDGECLKKDVRRSFYLNASSVEPLDATSTKTTDDNASTGAKE

Sequences:

>Translated_540_residues
MIDSMTHRKLSNTAQRPSPTRPRHGANATWRMLSVSALMLAMASTATWASDVKSQQTQAADIARNMANNTDTCYVEGVSD
RLNCGFVTVPENPNKPDGKQIQVHYVVLPAVKNVNHEEALLAIAGGPGQSAIDNAAGFDAMLSKVRQQRDILLIDQRGTG
RSNLLTCDEGAQSPLSFDDDNADTLAETQKCLAKIDADVTQYGSLNAIKDFEAVRQHLGYKKLHIYGISYGTRMAQLYMR
LYPAHLATVTLDGIVPMQQSVLEIGASIDRGFDLLFKDCQETTACHAQFPELKAEFDQVAASLAKAPVMENVYDPVTGEK
TMLTMTRGKFYGSIRMALYQANVRALVPHAIHQAAKHNFQPILGLYSLTTDNAGMAMGMHASVVCGEDMPRITPAMREQA
QHSFMGKTMLEGLEATCEVWKVPAVDDSFSEPISSDIPTLLLSGEIDPATPPSWGELAMEKLTNAKHFVAPYATHGVAYQ
SCANNLIADLVRSGSVKDLDGECLKKDVRRSFYLNASSVEPLDATSTKTTDDNASTGAKE
>Mature_540_residues
MIDSMTHRKLSNTAQRPSPTRPRHGANATWRMLSVSALMLAMASTATWASDVKSQQTQAADIARNMANNTDTCYVEGVSD
RLNCGFVTVPENPNKPDGKQIQVHYVVLPAVKNVNHEEALLAIAGGPGQSAIDNAAGFDAMLSKVRQQRDILLIDQRGTG
RSNLLTCDEGAQSPLSFDDDNADTLAETQKCLAKIDADVTQYGSLNAIKDFEAVRQHLGYKKLHIYGISYGTRMAQLYMR
LYPAHLATVTLDGIVPMQQSVLEIGASIDRGFDLLFKDCQETTACHAQFPELKAEFDQVAASLAKAPVMENVYDPVTGEK
TMLTMTRGKFYGSIRMALYQANVRALVPHAIHQAAKHNFQPILGLYSLTTDNAGMAMGMHASVVCGEDMPRITPAMREQA
QHSFMGKTMLEGLEATCEVWKVPAVDDSFSEPISSDIPTLLLSGEIDPATPPSWGELAMEKLTNAKHFVAPYATHGVAYQ
SCANNLIADLVRSGSVKDLDGECLKKDVRRSFYLNASSVEPLDATSTKTTDDNASTGAKE

Specific function: Unknown

COG id: COG0596

COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S33 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: NA

Molecular weight: Translated: 58741; Mature: 58741

Theoretical pI: Translated: 5.86; Mature: 5.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDSMTHRKLSNTAQRPSPTRPRHGANATWRMLSVSALMLAMASTATWASDVKSQQTQAA
CCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DIARNMANNTDTCYVEGVSDRLNCGFVTVPENPNKPDGKQIQVHYVVLPAVKNVNHEEAL
HHHHHHCCCCCEEEEECCCCCCCCCEEECCCCCCCCCCCEEEEEEEEEECHHCCCCCCEE
LAIAGGPGQSAIDNAAGFDAMLSKVRQQRDILLIDQRGTGRSNLLTCDEGAQSPLSFDDD
EEEECCCCCHHHHHHCCHHHHHHHHHHCCCEEEEECCCCCCCCCEECCCCCCCCCCCCCC
NADTLAETQKCLAKIDADVTQYGSLNAIKDFEAVRQHLGYKKLHIYGISYGTRMAQLYMR
CHHHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHCCCEEEEEEEECHHHHHHHHHHH
LYPAHLATVTLDGIVPMQQSVLEIGASIDRGFDLLFKDCQETTACHAQFPELKAEFDQVA
HHHHHHHEEEECCCCHHHHHHHHHHCHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
ASLAKAPVMENVYDPVTGEKTMLTMTRGKFYGSIRMALYQANVRALVPHAIHQAAKHNFQ
HHHHHCHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PILGLYSLTTDNAGMAMGMHASVVCGEDMPRITPAMREQAQHSFMGKTMLEGLEATCEVW
HHHHHEEECCCCCCEEECCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHE
KVPAVDDSFSEPISSDIPTLLLSGEIDPATPPSWGELAMEKLTNAKHFVAPYATHGVAYQ
ECCCCCCHHCCCHHCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCHHHCCCHHHCCHHHH
SCANNLIADLVRSGSVKDLDGECLKKDVRRSFYLNASSVEPLDATSTKTTDDNASTGAKE
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MIDSMTHRKLSNTAQRPSPTRPRHGANATWRMLSVSALMLAMASTATWASDVKSQQTQAA
CCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DIARNMANNTDTCYVEGVSDRLNCGFVTVPENPNKPDGKQIQVHYVVLPAVKNVNHEEAL
HHHHHHCCCCCEEEEECCCCCCCCCEEECCCCCCCCCCCEEEEEEEEEECHHCCCCCCEE
LAIAGGPGQSAIDNAAGFDAMLSKVRQQRDILLIDQRGTGRSNLLTCDEGAQSPLSFDDD
EEEECCCCCHHHHHHCCHHHHHHHHHHCCCEEEEECCCCCCCCCEECCCCCCCCCCCCCC
NADTLAETQKCLAKIDADVTQYGSLNAIKDFEAVRQHLGYKKLHIYGISYGTRMAQLYMR
CHHHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHCCCEEEEEEEECHHHHHHHHHHH
LYPAHLATVTLDGIVPMQQSVLEIGASIDRGFDLLFKDCQETTACHAQFPELKAEFDQVA
HHHHHHHEEEECCCCHHHHHHHHHHCHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
ASLAKAPVMENVYDPVTGEKTMLTMTRGKFYGSIRMALYQANVRALVPHAIHQAAKHNFQ
HHHHHCHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PILGLYSLTTDNAGMAMGMHASVVCGEDMPRITPAMREQAQHSFMGKTMLEGLEATCEVW
HHHHHEEECCCCCCEEECCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHE
KVPAVDDSFSEPISSDIPTLLLSGEIDPATPPSWGELAMEKLTNAKHFVAPYATHGVAYQ
ECCCCCCHHCCCHHCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCHHHCCCHHHCCHHHH
SCANNLIADLVRSGSVKDLDGECLKKDVRRSFYLNASSVEPLDATSTKTTDDNASTGAKE
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]