| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126176447
Identifier: 126176447
GI number: 126176447
Start: 4990771
End: 4991784
Strand: Reverse
Name: 126176447
Synonym: Sbal_4262
Alternate gene names: NA
Gene position: 4991784-4990771 (Counterclockwise)
Preceding gene: 126176448
Following gene: 126176446
Centisome position: 97.36
GC content: 44.48
Gene sequence:
>1014_bases ATGAGTTCGATTGAATTTGATATTCCCGAAGATCACCGTATTGCCTTTCAGAAGTATTACAAACAAAAAATCGCCCCTAA ATGCGGTCCGTTTGAAGCAAAGCGTGAAGGCGTAAACCAAAGGCGGCGTGAAAATGCCAAGTTCACCACCCCAATCTACT ACATATGCATCACGGTGATTTTGGGTGCATTCGCCGGGCTGCTTGGGGTCCAGTTTATGCTGGTGCCTATGGATTATTTT GTGCCTTTGATGATTGTCGCGTTCCTGCCCGCTCCCGTGATAGCGTTAGCGGTCATTGCCTCGGGTAAGGAAAGCGATGA ACTCTACAATGCCGCCTTTGAAAAACTCTATCCCATTAGCCTTAAGTATTTTGGCGATGACTTTGCGCTAACGAGGGCGC CTAAGGTCGATTTTTCGACCTTTATTGAGTTGGGGCTACTCCCTAAAACGGATAAGCAGTACGCGCAAAATTGCCTTAAG GGAACCTATAAAAAGGTGCCGTTCCAGTTTTATGAGGTCGATGCTTACAACACTAAATCGAACGATAATGGCTCGGTTCA GCGGGAGACCATCTTCAATGGTGTGCTGCTGGTTTGCAATATTCCTAAGAGATTCAATAGTACTACGCTGTTAGTCACTG ATAAGGGCAGTTTAAAAAATCGCCTTGAGGGTTTTAAGACTAAGCTATTGCGCGTCAAGCTTGAGGACGTAAGGTTCGAG CGGAGTTTTGAGGTTTATAGTAGCGATCAAGTCGAGGCGCGCTACTTACTCAATCCCTTGATGATGGAAAGTCTGTTGGC TTTGAGCCGCGAGTTAAATGCCGAAGTTGAAGCCTGTTTCTATCAAAAACAGTTGCTGATTAAGATACCGACAAAACACC ACTTCTTTATCAATCAACTCGACTTAGATCGCCCCATCAATTTTAAGCGTAATATCGAGCAGATGTTTACCGAGTTAGGT TATACCTTCTCAATAATCGATACTTTAAAACTTGATAAGCATACTGGGCTCTAG
Upstream 100 bases:
>100_bases TTAGTTCAGCATATACCGCAGGATGCTTAACTGTTTTTCGGTAACTAAATTATGTAAAATCATTGGCCTAAATGGATTTG AATCGTAAGAGTAGGAGCCA
Downstream 100 bases:
>100_bases AGTGTTAGGTTATTAACGAATAAGTGCATGGTATCTATTGGCCCTAGTGTTCTACGGCGATTTAGCGTCAGTACAACTTT GCTGCGGTAGGTATGTTCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 337; Mature: 336
Protein sequence:
>337_residues MSSIEFDIPEDHRIAFQKYYKQKIAPKCGPFEAKREGVNQRRRENAKFTTPIYYICITVILGAFAGLLGVQFMLVPMDYF VPLMIVAFLPAPVIALAVIASGKESDELYNAAFEKLYPISLKYFGDDFALTRAPKVDFSTFIELGLLPKTDKQYAQNCLK GTYKKVPFQFYEVDAYNTKSNDNGSVQRETIFNGVLLVCNIPKRFNSTTLLVTDKGSLKNRLEGFKTKLLRVKLEDVRFE RSFEVYSSDQVEARYLLNPLMMESLLALSRELNAEVEACFYQKQLLIKIPTKHHFFINQLDLDRPINFKRNIEQMFTELG YTFSIIDTLKLDKHTGL
Sequences:
>Translated_337_residues MSSIEFDIPEDHRIAFQKYYKQKIAPKCGPFEAKREGVNQRRRENAKFTTPIYYICITVILGAFAGLLGVQFMLVPMDYF VPLMIVAFLPAPVIALAVIASGKESDELYNAAFEKLYPISLKYFGDDFALTRAPKVDFSTFIELGLLPKTDKQYAQNCLK GTYKKVPFQFYEVDAYNTKSNDNGSVQRETIFNGVLLVCNIPKRFNSTTLLVTDKGSLKNRLEGFKTKLLRVKLEDVRFE RSFEVYSSDQVEARYLLNPLMMESLLALSRELNAEVEACFYQKQLLIKIPTKHHFFINQLDLDRPINFKRNIEQMFTELG YTFSIIDTLKLDKHTGL >Mature_336_residues SSIEFDIPEDHRIAFQKYYKQKIAPKCGPFEAKREGVNQRRRENAKFTTPIYYICITVILGAFAGLLGVQFMLVPMDYFV PLMIVAFLPAPVIALAVIASGKESDELYNAAFEKLYPISLKYFGDDFALTRAPKVDFSTFIELGLLPKTDKQYAQNCLKG TYKKVPFQFYEVDAYNTKSNDNGSVQRETIFNGVLLVCNIPKRFNSTTLLVTDKGSLKNRLEGFKTKLLRVKLEDVRFER SFEVYSSDQVEARYLLNPLMMESLLALSRELNAEVEACFYQKQLLIKIPTKHHFFINQLDLDRPINFKRNIEQMFTELGY TFSIIDTLKLDKHTGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38816; Mature: 38684
Theoretical pI: Translated: 8.81; Mature: 8.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSIEFDIPEDHRIAFQKYYKQKIAPKCGPFEAKREGVNQRRRENAKFTTPIYYICITVI CCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHH LGAFAGLLGVQFMLVPMDYFVPLMIVAFLPAPVIALAVIASGKESDELYNAAFEKLYPIS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCEE LKYFGDDFALTRAPKVDFSTFIELGLLPKTDKQYAQNCLKGTYKKVPFQFYEVDAYNTKS EEEECCCEEECCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCEEEEEEEEECCCC NDNGSVQRETIFNGVLLVCNIPKRFNSTTLLVTDKGSLKNRLEGFKTKLLRVKLEDVRFE CCCCCEEHHHHHCCEEEEEECCCCCCCEEEEEECCCHHHHHHHHHHHHHHHEEHHHHHHH RSFEVYSSDQVEARYLLNPLMMESLLALSRELNAEVEACFYQKQLLIKIPTKHHFFINQL HCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCEEEEECCCCCCEEEEEE DLDRPINFKRNIEQMFTELGYTFSIIDTLKLDKHTGL CCCCCCCHHHHHHHHHHHHCCEEEEHHHHCCCCCCCC >Mature Secondary Structure SSIEFDIPEDHRIAFQKYYKQKIAPKCGPFEAKREGVNQRRRENAKFTTPIYYICITVI CCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHH LGAFAGLLGVQFMLVPMDYFVPLMIVAFLPAPVIALAVIASGKESDELYNAAFEKLYPIS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCEE LKYFGDDFALTRAPKVDFSTFIELGLLPKTDKQYAQNCLKGTYKKVPFQFYEVDAYNTKS EEEECCCEEECCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCEEEEEEEEECCCC NDNGSVQRETIFNGVLLVCNIPKRFNSTTLLVTDKGSLKNRLEGFKTKLLRVKLEDVRFE CCCCCEEHHHHHCCEEEEEECCCCCCCEEEEEECCCHHHHHHHHHHHHHHHEEHHHHHHH RSFEVYSSDQVEARYLLNPLMMESLLALSRELNAEVEACFYQKQLLIKIPTKHHFFINQL HCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCEEEEECCCCCCEEEEEE DLDRPINFKRNIEQMFTELGYTFSIIDTLKLDKHTGL CCCCCCCHHHHHHHHHHHHCCEEEEHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA