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The map label for this gene is yoaF [H]

Identifier: 126176411

GI number: 126176411

Start: 4953097

End: 4953345

Strand: Direct

Name: yoaF [H]

Synonym: Sbal_4226

Alternate gene names: 126176411

Gene position: 4953097-4953345 (Clockwise)

Preceding gene: 126176410

Following gene: 126176414

Centisome position: 96.6

GC content: 51.41

Gene sequence:

>249_bases
ATGAAAGTCCTATTACCGCTTGCCGCTACTTTACTGCTAGCACTCGTGGGTTGCGGCGAAGCTGAAATACCTGCTGCGCA
AGTTAAGATTGCTAATCCCGCCTCAGAGTATTGCATCTCCCTCGGTGGTAGCTTGGCAATAGAGAAAACCGCCGAAGGTG
AGCATGGCATCTGTACCTTGCCAAACGGTGAAGCCATGGAAGAGTGGGCGTTATTCCGCCGTGATCATCAGGAAGAAAAG
CCGCAGTAA

Upstream 100 bases:

>100_bases
ATGCCATCGATAGCGCAGCCGCTTTGTATATGGATATCATCAACTTATTCCTACGTATTCTGCGGATTCTAGGGCGTAAA
TAAGTCACCAAGGAGTGTCT

Downstream 100 bases:

>100_bases
CAGTGGTTCTTTTTACCTTTAAAAAACAGGCGCCAATAATGGCGCCTGTTTTGTTATTAAGTAAACTGAAAATCTTAATT
GGCTAAGTGTTCAGCGCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 82; Mature: 82

Protein sequence:

>82_residues
MKVLLPLAATLLLALVGCGEAEIPAAQVKIANPASEYCISLGGSLAIEKTAEGEHGICTLPNGEAMEEWALFRRDHQEEK
PQ

Sequences:

>Translated_82_residues
MKVLLPLAATLLLALVGCGEAEIPAAQVKIANPASEYCISLGGSLAIEKTAEGEHGICTLPNGEAMEEWALFRRDHQEEK
PQ
>Mature_82_residues
MKVLLPLAATLLLALVGCGEAEIPAAQVKIANPASEYCISLGGSLAIEKTAEGEHGICTLPNGEAMEEWALFRRDHQEEK
PQ

Specific function: Unknown

COG id: COG3042

COG function: function code R; Putative hemolysin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788094, Length=69, Percent_Identity=49.2753623188406, Blast_Score=67, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005590 [H]

Pfam domain/function: PF03891 DUF333 [H]

EC number: NA

Molecular weight: Translated: 8744; Mature: 8744

Theoretical pI: Translated: 4.41; Mature: 4.41

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVLLPLAATLLLALVGCGEAEIPAAQVKIANPASEYCISLGGSLAIEKTAEGEHGICTL
CCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHCCCCEEEEECCCCCCCEEEC
PNGEAMEEWALFRRDHQEEKPQ
CCCCHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKVLLPLAATLLLALVGCGEAEIPAAQVKIANPASEYCISLGGSLAIEKTAEGEHGICTL
CCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHCCCCEEEEECCCCCCCEEEC
PNGEAMEEWALFRRDHQEEKPQ
CCCCHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]