| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126176379
Identifier: 126176379
GI number: 126176379
Start: 4915262
End: 4915861
Strand: Reverse
Name: 126176379
Synonym: Sbal_4194
Alternate gene names: NA
Gene position: 4915861-4915262 (Counterclockwise)
Preceding gene: 126176381
Following gene: 126176378
Centisome position: 95.87
GC content: 47.5
Gene sequence:
>600_bases ATGGATATCTGTTCTTTTGCCCTATTAGCTCAAGTTACAAACTCCCTTAGTTTACAGCAAGAGCTGAATGCTTTGCTGCT GCAAGATTGGCTACCCCACGTAAATCAGCGTGATTATCGTCAAGGGGATCAGGGCGGTTGGGATGTGTTGCCTTTGCGCT GCGCCGCTGAGTATCAAACAGCACATCCTATCTTGCAAGCCTTCTCCATCGCTACACAGGATCACTGGCATGACCTGCCT AGTCTCGAATCGAGCCCTGCATTATGCCGTTTTCTGCAATCCCTATTCTGCCCAGTGAAATCCGTGCGTTTGATGCGCTT ACATGCGGGGGCTGAAATCAAACCCCATAGAGATCAAGGACTCTGCTTAGAGCAAGGTGAGGCAAGACTGCATTTGCCAC TGCAAACGAATGAACAACTTAATTTTTACGTGGACGATAAACGTGTACCTATGCAAGCCGGCGATCTTTGGTATATCAAT GCCGACCAAGTCCATTGGGTTGAAAATAAAGGGCAGGATGCGCGGATCAACTTAGTGATTGATTGCGAAGTGAATACTTG GTTAAGGGAGTTAATCGATGCTGCAAAGTTCAGAGCGTGA
Upstream 100 bases:
>100_bases GTGGTCGCTATGATGATTATTCCCGTAACTTGTATGCTTACATCTTTGTGCTAGTCTTGGATGACTAATTATTTTTAGTC TGAAAATTAAGCGGTTGGAT
Downstream 100 bases:
>100_bases ATTAGAACAGAGTGTGAATGTCGTCGCGTTAACTCAGTTTGCTAACGCGCTATTGCTGTCAACCTCGGCAGGGGAGTCTA AACGGCTAATCGATCCCATA
Product: aspartyl/asparaginyl beta-hydroxylase
Products: NA
Alternate protein names: Aspartyl/Asparaginyl Beta-Hydroxylase Family; Aspartyl/Asparaginyl Beta-Hydroxylase Family Protein
Number of amino acids: Translated: 199; Mature: 199
Protein sequence:
>199_residues MDICSFALLAQVTNSLSLQQELNALLLQDWLPHVNQRDYRQGDQGGWDVLPLRCAAEYQTAHPILQAFSIATQDHWHDLP SLESSPALCRFLQSLFCPVKSVRLMRLHAGAEIKPHRDQGLCLEQGEARLHLPLQTNEQLNFYVDDKRVPMQAGDLWYIN ADQVHWVENKGQDARINLVIDCEVNTWLRELIDAAKFRA
Sequences:
>Translated_199_residues MDICSFALLAQVTNSLSLQQELNALLLQDWLPHVNQRDYRQGDQGGWDVLPLRCAAEYQTAHPILQAFSIATQDHWHDLP SLESSPALCRFLQSLFCPVKSVRLMRLHAGAEIKPHRDQGLCLEQGEARLHLPLQTNEQLNFYVDDKRVPMQAGDLWYIN ADQVHWVENKGQDARINLVIDCEVNTWLRELIDAAKFRA >Mature_199_residues MDICSFALLAQVTNSLSLQQELNALLLQDWLPHVNQRDYRQGDQGGWDVLPLRCAAEYQTAHPILQAFSIATQDHWHDLP SLESSPALCRFLQSLFCPVKSVRLMRLHAGAEIKPHRDQGLCLEQGEARLHLPLQTNEQLNFYVDDKRVPMQAGDLWYIN ADQVHWVENKGQDARINLVIDCEVNTWLRELIDAAKFRA
Specific function: Unknown
COG id: COG3555
COG function: function code O; Aspartyl/asparaginyl beta-hydroxylase and related dioxygenases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22823; Mature: 22823
Theoretical pI: Translated: 5.51; Mature: 5.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDICSFALLAQVTNSLSLQQELNALLLQDWLPHVNQRDYRQGDQGGWDVLPLRCAAEYQT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCEEEEEEHHHHHHH AHPILQAFSIATQDHWHDLPSLESSPALCRFLQSLFCPVKSVRLMRLHAGAEIKPHRDQG HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHEECCCCCCCCCCCC LCLEQGEARLHLPLQTNEQLNFYVDDKRVPMQAGDLWYINADQVHWVENKGQDARINLVI CEEECCCCEEEEEECCCCCEEEEECCCCCCCCCCCEEEEECCEEEEECCCCCCEEEEEEE DCEVNTWLRELIDAAKFRA ECCHHHHHHHHHHHHHCCC >Mature Secondary Structure MDICSFALLAQVTNSLSLQQELNALLLQDWLPHVNQRDYRQGDQGGWDVLPLRCAAEYQT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCEEEEEEHHHHHHH AHPILQAFSIATQDHWHDLPSLESSPALCRFLQSLFCPVKSVRLMRLHAGAEIKPHRDQG HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHEECCCCCCCCCCCC LCLEQGEARLHLPLQTNEQLNFYVDDKRVPMQAGDLWYINADQVHWVENKGQDARINLVI CEEECCCCEEEEEECCCCCEEEEECCCCCCCCCCCEEEEECCEEEEECCCCCCEEEEEEE DCEVNTWLRELIDAAKFRA ECCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA