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The map label for this gene is fdoI [C]

Identifier: 126176323

GI number: 126176323

Start: 4856922

End: 4857950

Strand: Direct

Name: fdoI [C]

Synonym: Sbal_4138

Alternate gene names: 126176323

Gene position: 4856922-4857950 (Clockwise)

Preceding gene: 126176322

Following gene: 126176324

Centisome position: 94.73

GC content: 47.23

Gene sequence:

>1029_bases
ATGTTAAACAAACAGTTAAACAAATCACTGCGCAGTCTGTTTGCTCTGTTGGTGCTCGTCATGGGATTGGGATTAGGTTC
AGTAATGAGCGCAAGCCCAGTACACGCAAGTGATCAGCAATCGAGTCAACAACAGGCGAAAGCGCAAACCAGCGATGCCG
ATCTTTGGCGGGCGGTAAAAGCAGGCGATGCCGGCTATACCACTGCAAAAGGGATAGATACTGGGGTGTTGATTAACGTT
GCCGGTAACCAAGGTAAAGAACTGAGAAACCAATATCTAACCCCGATTATGGCGTTGGCCGTCGTCGGTGTGTTTGGGGC
TTTCTTATTGTTTTATCTGGTGAATGGTCCATCAAAACTCAGCAAGGGCTTTTCAGGCAAGTTAGTGGCGCGTTGGTCTA
AGGCGGATCTGTGGATCCACTGGATCATGGCGAGCAGCTGCCTGACACTGATGTTTACCGGTTTAACCATAATGTTAGGT
AAGCATGTTGTTCAACCCATGTTAGGGCCTGATCTGTGGGCGCCATTGATCTACGGCAGCAAAACCATCCACGATTGGGC
TGGTCCCATTTTTATCGCGGCTTGGGCTGTCTGTGTCGTCAAATGGATGCCACTACAAACCTTCAAGATGTATGATTTGA
AATGGTTTTTAGTGGTAGGTGGTTATATCAACTTTGGCCCATTCAAAGGTAAACACCCCGACAGTGGTTTTGCTAACGCC
GGTGAAAAAATGTGGTTCTGGACCCTGATGTTGTTTGGTTTATTTATCAGTGTTTCTGGCATCATGTTGGTGTTACCAGG
CTTAGACTTACCGCGCGAAGCCTCCATGGGCGCGCTACTGATCCACTCTATCAGCGCCATTATCCTGATTGCCTTTACCA
TAGTGCATATTTGGATGGCGACCGTACTCAGCGAAGGCGGTATGGAGTGTATGAAGTCAGGCTATTGTGATGAAAACTGG
GCAATCCAACACCACAATCTCTGGTATGACGAAATCAAAGCCAACGGCAACTTAAAATATAAAGACTAA

Upstream 100 bases:

>100_bases
AATCCTAACGTGATTTGGGGTTACAACCCCAAGACAGGTGAGATTAACTAAGCAGAGCGAGGGTTAGGGAGTCATCCCTA
ACCTCTGGCAAGGAGTGAAA

Downstream 100 bases:

>100_bases
GTTAAACCGCAGCTTTTAGGTCCTTAAAACACCCCGCCATGCGGGGTGTTCTTTTATCTGCACTTCATTCGACAATACAA
AAACTTAACACCTGAAACGC

Product: formate dehydrogenase subunit gamma

Products: CO2; NADH

Alternate protein names: Formate Dehydrogenase Cytochrome; Formate Dehydrogenase Subunit C; Formate Dehydrogenase Cytochrome B Subunit; Formate Dehydrogenase Subunit Gamma; Formate Dehydrogenase C Subunit; Formate Dehydrogenase; Formate Dehydrogenase-N; Cytochrome B Subunit Of Formate Dehydrogenase; Formate Dehydrogenase Subunit C FdnI; Cytochrome; Formate Dehydrogenase Cytochrome C Subunit Gamma Subunit; Formate Dehydrogenase N Gamma Subunit

Number of amino acids: Translated: 342; Mature: 342

Protein sequence:

>342_residues
MLNKQLNKSLRSLFALLVLVMGLGLGSVMSASPVHASDQQSSQQQAKAQTSDADLWRAVKAGDAGYTTAKGIDTGVLINV
AGNQGKELRNQYLTPIMALAVVGVFGAFLLFYLVNGPSKLSKGFSGKLVARWSKADLWIHWIMASSCLTLMFTGLTIMLG
KHVVQPMLGPDLWAPLIYGSKTIHDWAGPIFIAAWAVCVVKWMPLQTFKMYDLKWFLVVGGYINFGPFKGKHPDSGFANA
GEKMWFWTLMLFGLFISVSGIMLVLPGLDLPREASMGALLIHSISAIILIAFTIVHIWMATVLSEGGMECMKSGYCDENW
AIQHHNLWYDEIKANGNLKYKD

Sequences:

>Translated_342_residues
MLNKQLNKSLRSLFALLVLVMGLGLGSVMSASPVHASDQQSSQQQAKAQTSDADLWRAVKAGDAGYTTAKGIDTGVLINV
AGNQGKELRNQYLTPIMALAVVGVFGAFLLFYLVNGPSKLSKGFSGKLVARWSKADLWIHWIMASSCLTLMFTGLTIMLG
KHVVQPMLGPDLWAPLIYGSKTIHDWAGPIFIAAWAVCVVKWMPLQTFKMYDLKWFLVVGGYINFGPFKGKHPDSGFANA
GEKMWFWTLMLFGLFISVSGIMLVLPGLDLPREASMGALLIHSISAIILIAFTIVHIWMATVLSEGGMECMKSGYCDENW
AIQHHNLWYDEIKANGNLKYKD
>Mature_342_residues
MLNKQLNKSLRSLFALLVLVMGLGLGSVMSASPVHASDQQSSQQQAKAQTSDADLWRAVKAGDAGYTTAKGIDTGVLINV
AGNQGKELRNQYLTPIMALAVVGVFGAFLLFYLVNGPSKLSKGFSGKLVARWSKADLWIHWIMASSCLTLMFTGLTIMLG
KHVVQPMLGPDLWAPLIYGSKTIHDWAGPIFIAAWAVCVVKWMPLQTFKMYDLKWFLVVGGYINFGPFKGKHPDSGFANA
GEKMWFWTLMLFGLFISVSGIMLVLPGLDLPREASMGALLIHSISAIILIAFTIVHIWMATVLSEGGMECMKSGYCDENW
AIQHHNLWYDEIKANGNLKYKD

Specific function: Allows To Use Formate As Major Electron Donor During Aerobic Respiration. Subunit Gamma Is Probably The Cytochrome B556(Fdo) Component Of The Formate Dehydrogenase. [C]

COG id: COG2864

COG function: function code C; Cytochrome b subunit of formate dehydrogenase

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790325, Length=217, Percent_Identity=23.963133640553, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.2.1.2

Molecular weight: Translated: 37640; Mature: 37640

Theoretical pI: Translated: 9.27; Mature: 9.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNKQLNKSLRSLFALLVLVMGLGLGSVMSASPVHASDQQSSQQQAKAQTSDADLWRAVK
CCCHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHH
AGDAGYTTAKGIDTGVLINVAGNQGKELRNQYLTPIMALAVVGVFGAFLLFYLVNGPSKL
CCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
SKGFSGKLVARWSKADLWIHWIMASSCLTLMFTGLTIMLGKHVVQPMLGPDLWAPLIYGS
CCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCC
KTIHDWAGPIFIAAWAVCVVKWMPLQTFKMYDLKWFLVVGGYINFGPFKGKHPDSGFANA
CHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCEEEEEEECCCEECCCCCCCCCCCCCCCC
GEKMWFWTLMLFGLFISVSGIMLVLPGLDLPREASMGALLIHSISAIILIAFTIVHIWMA
CCHHHHHHHHHHHHHHHHHCHHEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
TVLSEGGMECMKSGYCDENWAIQHHNLWYDEIKANGNLKYKD
HHHHHCCHHHHHCCCCCCCCCEEECCCCHHHHCCCCCCCCCC
>Mature Secondary Structure
MLNKQLNKSLRSLFALLVLVMGLGLGSVMSASPVHASDQQSSQQQAKAQTSDADLWRAVK
CCCHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHH
AGDAGYTTAKGIDTGVLINVAGNQGKELRNQYLTPIMALAVVGVFGAFLLFYLVNGPSKL
CCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
SKGFSGKLVARWSKADLWIHWIMASSCLTLMFTGLTIMLGKHVVQPMLGPDLWAPLIYGS
CCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCC
KTIHDWAGPIFIAAWAVCVVKWMPLQTFKMYDLKWFLVVGGYINFGPFKGKHPDSGFANA
CHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCEEEEEEECCCEECCCCCCCCCCCCCCCC
GEKMWFWTLMLFGLFISVSGIMLVLPGLDLPREASMGALLIHSISAIILIAFTIVHIWMA
CCHHHHHHHHHHHHHHHHHCHHEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
TVLSEGGMECMKSGYCDENWAIQHHNLWYDEIKANGNLKYKD
HHHHHCCHHHHHCCCCCCCCCEEECCCCHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: formate; NAD+

Specific reaction: formate + NAD+ = CO2 + NADH

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA