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The map label for this gene is torD [H]

Identifier: 126176319

GI number: 126176319

Start: 4852330

End: 4853007

Strand: Direct

Name: torD [H]

Synonym: Sbal_4134

Alternate gene names: 126176319

Gene position: 4852330-4853007 (Clockwise)

Preceding gene: 126176318

Following gene: 126176320

Centisome position: 94.64

GC content: 49.26

Gene sequence:

>678_bases
ATGACCGAATCAGTAAGACAAGTTTCAGAAAACGATCAGTTGAGAGCCGATATCTATCAACTGTTAGCCGCCCTATTGCG
CCGTCAGCCGAGTCCTGAACTGCTGCAATTTTTGGCCAATCTTGAAATCGATGCCAATGAAGACAACGAGATGACCAAAG
CTTGGTTATCACTCCAACTTGCCGCCCAGCAGTTCAACGATGAACAGCTTGAAGACGAGTATTTTGCGCTATTCCTCGGC
GTAGGCTCTGGTGAAATCCTGCCCTATGGCAGCTGGTTTATGACTGGCTCCTTAATGGACAAACCGCTGGCATTACTGCG
CCAAGACCTAATGCAACTTGGATTTGAACGCGAAGACAATGTCAAAGAACCCGAAGATCATGTAGCCGCCCTGTGTGAAG
TGATGGGAACCCTGATTCTAGAAGCGCCGAGCTATCGCCAACTGGCTTTTTACCAACGCCATATCGGCAGTTGGATTAGC
CACTTCTGCGACAACTTAGCTAAGGCGCCCAGCGCTGCGTTTTACGCGACTGTCGCCCAGCTAGCAAAAGCCTTCTTTGA
AATGGAAGCCAGTGCCTTTGAACAATTGAGCTTAGATATTCCCGTCAATTGCCCAGGCAGCGCCGACCTACAACCGGCCA
CCAGCGATTTAGCAAAACCAGTGGAATTAATGAACTAA

Upstream 100 bases:

>100_bases
AATATTGAGCGCTTGAAAATGTGTGGCGACTGCCGGGTAAAAGACATGTTTGAAGACATTCTTCAAGATCCTGAAAAGCA
ACTGCGATAAGAGATCCGCT

Downstream 100 bases:

>100_bases
GACTAAGCTTAATAATAGCGCGACATGTGCGCGCTAGATGTCAATGCTAAATGAATTTAAGCAGCGAAGGTGAAGTCACA
CGCACCTTCGCAACAATAAC

Product: cytoplasmic chaperone TorD family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 225; Mature: 224

Protein sequence:

>225_residues
MTESVRQVSENDQLRADIYQLLAALLRRQPSPELLQFLANLEIDANEDNEMTKAWLSLQLAAQQFNDEQLEDEYFALFLG
VGSGEILPYGSWFMTGSLMDKPLALLRQDLMQLGFEREDNVKEPEDHVAALCEVMGTLILEAPSYRQLAFYQRHIGSWIS
HFCDNLAKAPSAAFYATVAQLAKAFFEMEASAFEQLSLDIPVNCPGSADLQPATSDLAKPVELMN

Sequences:

>Translated_225_residues
MTESVRQVSENDQLRADIYQLLAALLRRQPSPELLQFLANLEIDANEDNEMTKAWLSLQLAAQQFNDEQLEDEYFALFLG
VGSGEILPYGSWFMTGSLMDKPLALLRQDLMQLGFEREDNVKEPEDHVAALCEVMGTLILEAPSYRQLAFYQRHIGSWIS
HFCDNLAKAPSAAFYATVAQLAKAFFEMEASAFEQLSLDIPVNCPGSADLQPATSDLAKPVELMN
>Mature_224_residues
TESVRQVSENDQLRADIYQLLAALLRRQPSPELLQFLANLEIDANEDNEMTKAWLSLQLAAQQFNDEQLEDEYFALFLGV
GSGEILPYGSWFMTGSLMDKPLALLRQDLMQLGFEREDNVKEPEDHVAALCEVMGTLILEAPSYRQLAFYQRHIGSWISH
FCDNLAKAPSAAFYATVAQLAKAFFEMEASAFEQLSLDIPVNCPGSADLQPATSDLAKPVELMN

Specific function: Involved in the biogenesis of torA. Acts on torA before the insertion of the molybdenum cofactor and, as a result, probably favors a conformation of the apoenzyme that is competent for acquiring the cofactor [H]

COG id: COG3381

COG function: function code R; Uncharacterized component of anaerobic dehydrogenases

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the torD/dmsD family. TorD subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023069
- InterPro:   IPR020945 [H]

Pfam domain/function: PF02613 Nitrate_red_del [H]

EC number: NA

Molecular weight: Translated: 25214; Mature: 25083

Theoretical pI: Translated: 4.03; Mature: 4.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTESVRQVSENDQLRADIYQLLAALLRRQPSPELLQFLANLEIDANEDNEMTKAWLSLQL
CCHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
AAQQFNDEQLEDEYFALFLGVGSGEILPYGSWFMTGSLMDKPLALLRQDLMQLGFEREDN
HHHHCCHHHHHHHHHHHEEECCCCCEEECCHHHHCCHHHHHHHHHHHHHHHHHCCCCCCC
VKEPEDHVAALCEVMGTLILEAPSYRQLAFYQRHIGSWISHFCDNLAKAPSAAFYATVAQ
CCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
LAKAFFEMEASAFEQLSLDIPVNCPGSADLQPATSDLAKPVELMN
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure 
TESVRQVSENDQLRADIYQLLAALLRRQPSPELLQFLANLEIDANEDNEMTKAWLSLQL
CHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
AAQQFNDEQLEDEYFALFLGVGSGEILPYGSWFMTGSLMDKPLALLRQDLMQLGFEREDN
HHHHCCHHHHHHHHHHHEEECCCCCEEECCHHHHCCHHHHHHHHHHHHHHHHHCCCCCCC
VKEPEDHVAALCEVMGTLILEAPSYRQLAFYQRHIGSWISHFCDNLAKAPSAAFYATVAQ
CCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
LAKAFFEMEASAFEQLSLDIPVNCPGSADLQPATSDLAKPVELMN
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA