Click here to switch to the map view.

The map label for this gene is fdhD [H]

Identifier: 126176315

GI number: 126176315

Start: 4848144

End: 4849034

Strand: Reverse

Name: fdhD [H]

Synonym: Sbal_4130

Alternate gene names: 126176315

Gene position: 4849034-4848144 (Counterclockwise)

Preceding gene: 126176328

Following gene: 126176314

Centisome position: 94.57

GC content: 47.81

Gene sequence:

>891_bases
ATGATTTCGGAAAACAGCATGGGCACAGATAAAGAAGTAGCGGCAGCTAACCCCACTCAGAAGCCTCATCATCAGTGTTC
TTTTGTGAGAACCCAAGCGGAAATACCGTTAACCATTGCCGTAAAAGCAGTGAATGAAGCTGGGGAAGTGCTAGATAAAT
TTGTCGCCTGCGAACGTCCACTTACCGTTTATTTAAACTGGCGTCCGATAGTGACGCTGATGACCCTAGGGGCAAAACCT
GAGTCTCTGGCGTTAGGTTATCTTAAGAACCAAGGCTTTATTTCGGATGTGAGCCTGCTGGACTCTGTTATCGTCGATTG
GGATGTGAGTTCTGCGGCTGTGGTTACCCGTGAACAAACCGCCGATCTCGACGAGAAGCTCTCTGAAAAAACCGTGACGT
CAGGCTGTGGTCAAGGCACGGTTTATGGCAGTTTCATGCAGGATCTAGATAACATCAATTTACCAACTCCGAGTTTGAAG
CAAAGCACGCTGTATAGCTTATTGAAAAATATCAACGAATATAACGAAACCTATAAGAATGCTGGCGCTGTGCATGGCTG
TGGTTTGTGCGAAGACGATAGGATTATGGCCTTCGTTGAAGATGTCGGCCGCCATAATGCCGTCGATACCTTGGCTGGGG
ATATGTGGCTGACGCAGGATCGTGGTGATAACAAGATATTCTATACCACAGGCCGCTTAACCTCTGAAATGGTGATTAAA
GTCGCCAAGATGGGGATCCCCATTTTGCTATCACGTAGCGGCGTGACTCAGATGGGCTTAGCACTGGCGCAGCAGTTAGG
CATTACTATTATCGCCCGCGCCAAAGGTCGACACTTTTTGGTGTATCACGGCAGTGAAAATCTGCAATTTGATGCCAATA
CGGCTCCTTAG

Upstream 100 bases:

>100_bases
AAAAATCAGCATTGCGGCAGATCACGCATTTAAACCCGAGTTTTATACCTAGGTATAAATATTGCTATGCTCAGGCCATG
ACTCGTTAAGCGGTAGCATT

Downstream 100 bases:

>100_bases
CCCCAAGTGAGCTAAGACAGTAATGCTAAGACTTGCATGCAGTAATAAAGAATAAGACAAGGAAACAAGATGACGTCTGC
CAGTGAATTGGTTTACATGA

Product: formate dehydrogenase subunit FdhD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 296; Mature: 296

Protein sequence:

>296_residues
MISENSMGTDKEVAAANPTQKPHHQCSFVRTQAEIPLTIAVKAVNEAGEVLDKFVACERPLTVYLNWRPIVTLMTLGAKP
ESLALGYLKNQGFISDVSLLDSVIVDWDVSSAAVVTREQTADLDEKLSEKTVTSGCGQGTVYGSFMQDLDNINLPTPSLK
QSTLYSLLKNINEYNETYKNAGAVHGCGLCEDDRIMAFVEDVGRHNAVDTLAGDMWLTQDRGDNKIFYTTGRLTSEMVIK
VAKMGIPILLSRSGVTQMGLALAQQLGITIIARAKGRHFLVYHGSENLQFDANTAP

Sequences:

>Translated_296_residues
MISENSMGTDKEVAAANPTQKPHHQCSFVRTQAEIPLTIAVKAVNEAGEVLDKFVACERPLTVYLNWRPIVTLMTLGAKP
ESLALGYLKNQGFISDVSLLDSVIVDWDVSSAAVVTREQTADLDEKLSEKTVTSGCGQGTVYGSFMQDLDNINLPTPSLK
QSTLYSLLKNINEYNETYKNAGAVHGCGLCEDDRIMAFVEDVGRHNAVDTLAGDMWLTQDRGDNKIFYTTGRLTSEMVIK
VAKMGIPILLSRSGVTQMGLALAQQLGITIIARAKGRHFLVYHGSENLQFDANTAP
>Mature_296_residues
MISENSMGTDKEVAAANPTQKPHHQCSFVRTQAEIPLTIAVKAVNEAGEVLDKFVACERPLTVYLNWRPIVTLMTLGAKP
ESLALGYLKNQGFISDVSLLDSVIVDWDVSSAAVVTREQTADLDEKLSEKTVTSGCGQGTVYGSFMQDLDNINLPTPSLK
QSTLYSLLKNINEYNETYKNAGAVHGCGLCEDDRIMAFVEDVGRHNAVDTLAGDMWLTQDRGDNKIFYTTGRLTSEMVIK
VAKMGIPILLSRSGVTQMGLALAQQLGITIIARAKGRHFLVYHGSENLQFDANTAP

Specific function: Necessary for formate dehydrogenase activity [H]

COG id: COG1526

COG function: function code C; Uncharacterized protein required for formate dehydrogenase activity

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fdhD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003786 [H]

Pfam domain/function: PF02634 FdhD-NarQ [H]

EC number: NA

Molecular weight: Translated: 32302; Mature: 32302

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISENSMGTDKEVAAANPTQKPHHQCSFVRTQAEIPLTIAVKAVNEAGEVLDKFVACERP
CCCCCCCCCCCCHHCCCCCCCCCHHHHHEEECCCCCEEEEEEEHHHHHHHHHHHHHCCCC
LTVYLNWRPIVTLMTLGAKPESLALGYLKNQGFISDVSLLDSVIVDWDVSSAAVVTREQT
EEEEECCCEEEEHEECCCCCCHHEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEECHHH
ADLDEKLSEKTVTSGCGQGTVYGSFMQDLDNINLPTPSLKQSTLYSLLKNINEYNETYKN
CCHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
AGAVHGCGLCEDDRIMAFVEDVGRHNAVDTLAGDMWLTQDRGDNKIFYTTGRLTSEMVIK
CCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHCCEEEECCCCCCEEEEEECCHHHHHHHH
VAKMGIPILLSRSGVTQMGLALAQQLGITIIARAKGRHFLVYHGSENLQFDANTAP
HHHCCCCEEEECCCHHHHHHHHHHHCCEEEEEECCCCEEEEEECCCCEEECCCCCC
>Mature Secondary Structure
MISENSMGTDKEVAAANPTQKPHHQCSFVRTQAEIPLTIAVKAVNEAGEVLDKFVACERP
CCCCCCCCCCCCHHCCCCCCCCCHHHHHEEECCCCCEEEEEEEHHHHHHHHHHHHHCCCC
LTVYLNWRPIVTLMTLGAKPESLALGYLKNQGFISDVSLLDSVIVDWDVSSAAVVTREQT
EEEEECCCEEEEHEECCCCCCHHEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEECHHH
ADLDEKLSEKTVTSGCGQGTVYGSFMQDLDNINLPTPSLKQSTLYSLLKNINEYNETYKN
CCHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
AGAVHGCGLCEDDRIMAFVEDVGRHNAVDTLAGDMWLTQDRGDNKIFYTTGRLTSEMVIK
CCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHCCEEEECCCCCCEEEEEECCHHHHHHHH
VAKMGIPILLSRSGVTQMGLALAQQLGITIIARAKGRHFLVYHGSENLQFDANTAP
HHHCCCCEEEECCCHHHHHHHHHHHCCEEEEEECCCCEEEEEECCCCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA