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The map label for this gene is ydiU [C]

Identifier: 126176249

GI number: 126176249

Start: 4770123

End: 4771577

Strand: Reverse

Name: ydiU [C]

Synonym: Sbal_4063

Alternate gene names: 126176249

Gene position: 4771577-4770123 (Counterclockwise)

Preceding gene: 126176250

Following gene: 126176248

Centisome position: 93.06

GC content: 50.45

Gene sequence:

>1455_bases
ATGAAGTTTAAACAGGATTTTTTTACGCAGTTACCTGAGTTTTACTCGCAAGTTTACCCGCAAGGGATTACTAAGCCTGA
ATGGCTGGCATGGAGTGATGACGCTGCGCAATTGATTGGCTTGAGCCAACCCACAGATGAGCTGTTATTGGGCTTGTCTG
GCAATGCCGCTGTCGATGGTGCGACTTACTATGCCCAAGTGTATAGCGGCCACCAATTTGGCGGTTATACGCCGCGCTTA
GGGGATGGACGCTCGATCATTTTAGGTGAAGCGATTGGCCCAAATGGCGCATGGGATGTCGCCCTTAAAGGCGGCGGTCC
GACGCCTTATTCGCGCCGTGGTGATGGTCGAGCTGTGATGCGCTCTGCCGTGCGTGAGTTTTTAGTCTCTGAAGCGTTGC
ATCATTTGCACGTGCCGACGACCCGCGCTTTGGCGGTGATTGGCTCTGACCTACCCGTATGGCGTGAGAGCCAAGAAACC
GCAGCCATTACCGTGCGTTTAGCTCGCAGCCATATTCGTTTCGGCCATTTCGAGTTTTTCTGCCACAGTGAGCGCGGCCG
TGCCGATAAGCTGATTCAATTACTCAACTTCACTATTACTCAGCATTATCCCCATTTGAGTTGTGATGCCGCAGGCTATA
AAGCGTGGTTTTTACAGGTAGTGCAAGATACCGCCAAGATGATTGCCCACTGGCAGGCGGTCGGTTTTGCCCATGGCGTG
ATGAACACAGACAATATGTCGATTCTGGGTGACAGTTTTGACTTCGGTCCCTTTGCGTTCCTCGATACATTCCAAGAGGA
TTTTATCTGTAATCATTCGGATCCCGAAGGTCGCTATGCCTTTGGTCAGCAGCCGGGTATCGGTTTGTGGAACTTGCAAC
GCTTAGCGCAGGCGCTCACACCTGTGATCCCATCCGATGACTTAATTGCGATTCTTAATCAATACCAAGAGGCGCTAGTG
CAGCCTTATTTGCGCTTGATGCGGGCGAAATTAGGTCTCTCTGCAGTTGATGTCCCGTCGGTAGAGCAGGACAAACAGGA
TCTCGACCTCATAGGTCGATTCACTGTGCTGATGGAGAAAAATCAGCTTGATTACACTCAGACTTGGCGCCAATTAGGCA
AGTTAGATCCGACCAGCAAACACAGTGCGCTACGGGATGACTTTATTGATGTCAGTCAGTTTGATACTTGGTATCAAGCC
TACCAACAACGATTGGGTGCAGTAGCGGATATCCCAGCGTGGCAAACTGAGCGCAATAGTGTGAATCCCAAATATATTTT
GCGTAACTATTTAGCCCAAGAGGCGATAATCGCGGTGGAAGAGGGTAATCTTGCGCCGCTGCATTTGCTGCAAAAAATCT
TAACTCAGCCCTTTGCCGAGCACGCAGAGCATGAAGACTTGGCCAAGCGTCCACCGGATTGGGGCCAAGGTTTGATCATG
TCATGTAGTAGTTGA

Upstream 100 bases:

>100_bases
GAGTGGCTTTGGCCTTGGGGTGTATCAATGTGGGCACCTATGTGAGTTCGACGAAAAGTCGGTGCTGGTTTGCAAGACCA
TGAGCCAATAGGTGGACAAG

Downstream 100 bases:

>100_bases
TTGGATAACAAGCATGAAATTACCAAGCACGCACCTAAAAGCCATTAGCTTAGATACCATTCGCTTAGATAGAAGCGCCT
TAAGTTTAGCGGTCAGTGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 484; Mature: 484

Protein sequence:

>484_residues
MKFKQDFFTQLPEFYSQVYPQGITKPEWLAWSDDAAQLIGLSQPTDELLLGLSGNAAVDGATYYAQVYSGHQFGGYTPRL
GDGRSIILGEAIGPNGAWDVALKGGGPTPYSRRGDGRAVMRSAVREFLVSEALHHLHVPTTRALAVIGSDLPVWRESQET
AAITVRLARSHIRFGHFEFFCHSERGRADKLIQLLNFTITQHYPHLSCDAAGYKAWFLQVVQDTAKMIAHWQAVGFAHGV
MNTDNMSILGDSFDFGPFAFLDTFQEDFICNHSDPEGRYAFGQQPGIGLWNLQRLAQALTPVIPSDDLIAILNQYQEALV
QPYLRLMRAKLGLSAVDVPSVEQDKQDLDLIGRFTVLMEKNQLDYTQTWRQLGKLDPTSKHSALRDDFIDVSQFDTWYQA
YQQRLGAVADIPAWQTERNSVNPKYILRNYLAQEAIIAVEEGNLAPLHLLQKILTQPFAEHAEHEDLAKRPPDWGQGLIM
SCSS

Sequences:

>Translated_484_residues
MKFKQDFFTQLPEFYSQVYPQGITKPEWLAWSDDAAQLIGLSQPTDELLLGLSGNAAVDGATYYAQVYSGHQFGGYTPRL
GDGRSIILGEAIGPNGAWDVALKGGGPTPYSRRGDGRAVMRSAVREFLVSEALHHLHVPTTRALAVIGSDLPVWRESQET
AAITVRLARSHIRFGHFEFFCHSERGRADKLIQLLNFTITQHYPHLSCDAAGYKAWFLQVVQDTAKMIAHWQAVGFAHGV
MNTDNMSILGDSFDFGPFAFLDTFQEDFICNHSDPEGRYAFGQQPGIGLWNLQRLAQALTPVIPSDDLIAILNQYQEALV
QPYLRLMRAKLGLSAVDVPSVEQDKQDLDLIGRFTVLMEKNQLDYTQTWRQLGKLDPTSKHSALRDDFIDVSQFDTWYQA
YQQRLGAVADIPAWQTERNSVNPKYILRNYLAQEAIIAVEEGNLAPLHLLQKILTQPFAEHAEHEDLAKRPPDWGQGLIM
SCSS
>Mature_484_residues
MKFKQDFFTQLPEFYSQVYPQGITKPEWLAWSDDAAQLIGLSQPTDELLLGLSGNAAVDGATYYAQVYSGHQFGGYTPRL
GDGRSIILGEAIGPNGAWDVALKGGGPTPYSRRGDGRAVMRSAVREFLVSEALHHLHVPTTRALAVIGSDLPVWRESQET
AAITVRLARSHIRFGHFEFFCHSERGRADKLIQLLNFTITQHYPHLSCDAAGYKAWFLQVVQDTAKMIAHWQAVGFAHGV
MNTDNMSILGDSFDFGPFAFLDTFQEDFICNHSDPEGRYAFGQQPGIGLWNLQRLAQALTPVIPSDDLIAILNQYQEALV
QPYLRLMRAKLGLSAVDVPSVEQDKQDLDLIGRFTVLMEKNQLDYTQTWRQLGKLDPTSKHSALRDDFIDVSQFDTWYQA
YQQRLGAVADIPAWQTERNSVNPKYILRNYLAQEAIIAVEEGNLAPLHLLQKILTQPFAEHAEHEDLAKRPPDWGQGLIM
SCSS

Specific function: Unknown

COG id: COG0397

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0061 (SELO) family [H]

Homologues:

Organism=Homo sapiens, GI32880229, Length=383, Percent_Identity=42.0365535248042, Blast_Score=277, Evalue=1e-74,
Organism=Escherichia coli, GI1787999, Length=488, Percent_Identity=45.4918032786885, Blast_Score=412, Evalue=1e-116,
Organism=Saccharomyces cerevisiae, GI6325034, Length=327, Percent_Identity=37.0030581039755, Blast_Score=187, Evalue=4e-48,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003846 [H]

Pfam domain/function: PF02696 UPF0061 [H]

EC number: NA

Molecular weight: Translated: 54268; Mature: 54268

Theoretical pI: Translated: 5.68; Mature: 5.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFKQDFFTQLPEFYSQVYPQGITKPEWLAWSDDAAQLIGLSQPTDELLLGLSGNAAVDG
CCCCHHHHHHHHHHHHHHCCCCCCCCCCEEECCCHHHHHCCCCCHHHHEEECCCCCCCCC
ATYYAQVYSGHQFGGYTPRLGDGRSIILGEAIGPNGAWDVALKGGGPTPYSRRGDGRAVM
HHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCHHHH
RSAVREFLVSEALHHLHVPTTRALAVIGSDLPVWRESQETAAITVRLARSHIRFGHFEFF
HHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEE
CHSERGRADKLIQLLNFTITQHYPHLSCDAAGYKAWFLQVVQDTAKMIAHWQAVGFAHGV
EECCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
MNTDNMSILGDSFDFGPFAFLDTFQEDFICNHSDPEGRYAFGQQPGIGLWNLQRLAQALT
CCCCCCEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHC
PVIPSDDLIAILNQYQEALVQPYLRLMRAKLGLSAVDVPSVEQDKQDLDLIGRFTVLMEK
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHEEEEC
NQLDYTQTWRQLGKLDPTSKHSALRDDFIDVSQFDTWYQAYQQRLGAVADIPAWQTERNS
CCCCHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
VNPKYILRNYLAQEAIIAVEEGNLAPLHLLQKILTQPFAEHAEHEDLAKRPPDWGQGLIM
CCHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCEEE
SCSS
ECCC
>Mature Secondary Structure
MKFKQDFFTQLPEFYSQVYPQGITKPEWLAWSDDAAQLIGLSQPTDELLLGLSGNAAVDG
CCCCHHHHHHHHHHHHHHCCCCCCCCCCEEECCCHHHHHCCCCCHHHHEEECCCCCCCCC
ATYYAQVYSGHQFGGYTPRLGDGRSIILGEAIGPNGAWDVALKGGGPTPYSRRGDGRAVM
HHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCHHHH
RSAVREFLVSEALHHLHVPTTRALAVIGSDLPVWRESQETAAITVRLARSHIRFGHFEFF
HHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEE
CHSERGRADKLIQLLNFTITQHYPHLSCDAAGYKAWFLQVVQDTAKMIAHWQAVGFAHGV
EECCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
MNTDNMSILGDSFDFGPFAFLDTFQEDFICNHSDPEGRYAFGQQPGIGLWNLQRLAQALT
CCCCCCEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHC
PVIPSDDLIAILNQYQEALVQPYLRLMRAKLGLSAVDVPSVEQDKQDLDLIGRFTVLMEK
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHEEEEC
NQLDYTQTWRQLGKLDPTSKHSALRDDFIDVSQFDTWYQAYQQRLGAVADIPAWQTERNS
CCCCHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
VNPKYILRNYLAQEAIIAVEEGNLAPLHLLQKILTQPFAEHAEHEDLAKRPPDWGQGLIM
CCHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCEEE
SCSS
ECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA