| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
Click here to switch to the map view.
The map label for this gene is 126176160
Identifier: 126176160
GI number: 126176160
Start: 4662309
End: 4663046
Strand: Direct
Name: 126176160
Synonym: Sbal_3972
Alternate gene names: NA
Gene position: 4662309-4663046 (Clockwise)
Preceding gene: 126176135
Following gene: 126176161
Centisome position: 90.93
GC content: 44.31
Gene sequence:
>738_bases ATGAAATCGCTATTGATATACGGAAAGTTCTTTTCCCTCACAATCTTACTGAGCCTAGGATTACTTCCGCTCAATGTGCA CGCAAAGGGGAAGATCACGGCGACTGAGCAAATATCTCAGCAAATGACAAACTCTGTGGCCGCAGAGATCGCTAAGTGGC AACAATCGCAAGAAATCAAAAAAATCAGCAAGAAAATCTCACTGCACATTCCCTCTAGCACGGCGAAATTAAAAACCTGC AGTACGGCGCTCCAAATTGAGGCCGCAAAAGGACTCCCATTCGGTCGGATCCAACGAAAAATAAGCTGCATCTCTGAAGG CTGGTCACTGTATGTCCGGGCTAAGGTTGCCCTCAGCGCTTACATCCCTGTGGCCAATAAAACCCTTGTAAGAGATGAAA TTGTTACATCAGAAAATCTTCAATGGAAAATGCTGCCCTTAACGGCATCAGACCAAGATATTATTACTGATGACAAACAT ATTTTAGGTCAGGCAGTAGCCAGAAAAATAAGAAAAAACAAACCAATAAGAGCAAGCAACTTGAATGCGCCTGAACTTGT TAGCATAGGAGATGAAGTGATTATCGAAGCCGCCAGCAGCACCTTTTATGCGCATATGACTGGCATTGCTATGGATGCAG GTAAACTGGGGGATGCCATCAGAGTGCGCAATAGTAGTTCAGGAAGAATCATTACTGCTTACCCCATAGCAAAGGGCAGA GTTGAAACTCGCTTCTAA
Upstream 100 bases:
>100_bases CCATCTCAACTCCTAGTACTGTATGCCTAATTAATATAGATGGCCGAGAAGCTTACAATTAGCATGCCAATATAATTTTC AATATAAAACAGTTGGTTAA
Downstream 100 bases:
>100_bases AAATTAGGCTTGATTAAGATAAATCGAAATTTCATTTTAGAAAAATACCATTCAGGTCGCCTATATCTAGTATCAGGCCA TTTATGACGATGAACATCTA
Product: SAF domain-containing protein
Products: NA
Alternate protein names: SAF Domain-Containing Protein; Flagella Basal Body P-Ring Formation Protein FlgA; Flageller Protein FlgA; Flagellar Basal Body P-Ring Biosynthesis Protein; Lateral Flagellar P-Ring Addition Protein; Flagellar Basal Body P-Ring Biosynthesis Protein-Like; Flagellar Basal-Body P-Ring Formation Protein FlgA; SAF Domain Protein; Flagellar Biosynthesis
Number of amino acids: Translated: 245; Mature: 245
Protein sequence:
>245_residues MKSLLIYGKFFSLTILLSLGLLPLNVHAKGKITATEQISQQMTNSVAAEIAKWQQSQEIKKISKKISLHIPSSTAKLKTC STALQIEAAKGLPFGRIQRKISCISEGWSLYVRAKVALSAYIPVANKTLVRDEIVTSENLQWKMLPLTASDQDIITDDKH ILGQAVARKIRKNKPIRASNLNAPELVSIGDEVIIEAASSTFYAHMTGIAMDAGKLGDAIRVRNSSSGRIITAYPIAKGR VETRF
Sequences:
>Translated_245_residues MKSLLIYGKFFSLTILLSLGLLPLNVHAKGKITATEQISQQMTNSVAAEIAKWQQSQEIKKISKKISLHIPSSTAKLKTC STALQIEAAKGLPFGRIQRKISCISEGWSLYVRAKVALSAYIPVANKTLVRDEIVTSENLQWKMLPLTASDQDIITDDKH ILGQAVARKIRKNKPIRASNLNAPELVSIGDEVIIEAASSTFYAHMTGIAMDAGKLGDAIRVRNSSSGRIITAYPIAKGR VETRF >Mature_245_residues MKSLLIYGKFFSLTILLSLGLLPLNVHAKGKITATEQISQQMTNSVAAEIAKWQQSQEIKKISKKISLHIPSSTAKLKTC STALQIEAAKGLPFGRIQRKISCISEGWSLYVRAKVALSAYIPVANKTLVRDEIVTSENLQWKMLPLTASDQDIITDDKH ILGQAVARKIRKNKPIRASNLNAPELVSIGDEVIIEAASSTFYAHMTGIAMDAGKLGDAIRVRNSSSGRIITAYPIAKGR VETRF
Specific function: Unknown
COG id: COG1261
COG function: function code NO; Flagellar basal body P-ring biosynthesis protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26831; Mature: 26831
Theoretical pI: Translated: 10.57; Mature: 10.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSLLIYGKFFSLTILLSLGLLPLNVHAKGKITATEQISQQMTNSVAAEIAKWQQSQEIK CCCEEEEHHHHHHHHHHHHCCEEEEEECCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHH KISKKISLHIPSSTAKLKTCSTALQIEAAKGLPFGRIQRKISCISEGWSLYVRAKVALSA HHHHHEEEEECCCCCHHHHHHHEEEEEECCCCCHHHHHHHHHHHHCCCEEEEEEEEEEEE YIPVANKTLVRDEIVTSENLQWKMLPLTASDQDIITDDKHILGQAVARKIRKNKPIRASN ECCCCCCEEHHHHHHCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCC LNAPELVSIGDEVIIEAASSTFYAHMTGIAMDAGKLGDAIRVRNSSSGRIITAYPIAKGR CCCCCEECCCHHHEEEECCCEEEEEEHEEEECCCCCCCEEEEECCCCCEEEEEECCCCCC VETRF CCCCC >Mature Secondary Structure MKSLLIYGKFFSLTILLSLGLLPLNVHAKGKITATEQISQQMTNSVAAEIAKWQQSQEIK CCCEEEEHHHHHHHHHHHHCCEEEEEECCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHH KISKKISLHIPSSTAKLKTCSTALQIEAAKGLPFGRIQRKISCISEGWSLYVRAKVALSA HHHHHEEEEECCCCCHHHHHHHEEEEEECCCCCHHHHHHHHHHHHCCCEEEEEEEEEEEE YIPVANKTLVRDEIVTSENLQWKMLPLTASDQDIITDDKHILGQAVARKIRKNKPIRASN ECCCCCCEEHHHHHHCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCC LNAPELVSIGDEVIIEAASSTFYAHMTGIAMDAGKLGDAIRVRNSSSGRIITAYPIAKGR CCCCCEECCCHHHEEEECCCEEEEEEHEEEECCCCCCCEEEEECCCCCEEEEEECCCCCC VETRF CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA