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The map label for this gene is flgH [H]

Identifier: 126176153

GI number: 126176153

Start: 4657343

End: 4658005

Strand: Reverse

Name: flgH [H]

Synonym: Sbal_3965

Alternate gene names: 126176153

Gene position: 4658005-4657343 (Counterclockwise)

Preceding gene: 126176154

Following gene: 126176152

Centisome position: 90.85

GC content: 45.7

Gene sequence:

>663_bases
ATGCGTTGGTTATGGTTTTTATGTTTTGCACTGCTATCGGGTTGTATGTCGCATATTCCAGATAAGGAAACGAAACCTGG
AACTAAAGAATGGGCACCGCCTGAGATTGACTACAGCCTGCCGGATGCAAAGGATGGCAGTCTTTATCGTCCCGGTTTCA
TGTTGACTCTTTTTAAGGATAAACGTGCTTTCCGTGAGGGCGATATTTTAACCGTCGCATTAGATGAAAAAACCTATTCG
AGCAAGAAAGCGGATACCAAGACCAACAAAGAACAAGATATGGGCATGGGGCTGACGGGGAATATCGGTTCCCAAAGTGC
CAATGCTGACGGTAAAACCTCTTTTTCGAGAGGGTTTAATGGTGCAGGGTCGAGTACGCAGCAAAACCAGCTATCAGGTT
CAATCACTGTAACCGTCTCTAAGGTTTTACCTAATGGAACCTTGTTGATCCGCGGTGAAAAATGGCTGCGCTTGAATCAG
GGCGATGAGTATTTGCGCTTACTTGGCATCATACGTACAGACGATATAGGTAATAACAATACGATATCGTCGCAACGTAT
TGCCGACGCCAGAATTATTTATGGTGGTCAAGGTGCCATTGCCGACAGTAATGCTATGGGATGGGCTTCTCGCTATTTCA
ATAGCCCATGGTTCCCGCTTTAG

Upstream 100 bases:

>100_bases
ATGATTTCCACGCAGAGAGCATATGAGATGAATGCCAAGGTTGTGTCAGCTTCTGACGATATGCTCAAGTTCCTCAATCA
ATCGGTTTAGAGAGGCAGTC

Downstream 100 bases:

>100_bases
CCAAGGATGTTTTGATGCTACGTTGTTTATTATTGTTACTTTTGGCTACAGGTACGCTGCAAGCAGAAGAGCAAAGCCGC
TACTTGATGGATGTTGTTGA

Product: flagellar basal body L-ring protein

Products: NA

Alternate protein names: Basal body L-ring protein 2 [H]

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MRWLWFLCFALLSGCMSHIPDKETKPGTKEWAPPEIDYSLPDAKDGSLYRPGFMLTLFKDKRAFREGDILTVALDEKTYS
SKKADTKTNKEQDMGMGLTGNIGSQSANADGKTSFSRGFNGAGSSTQQNQLSGSITVTVSKVLPNGTLLIRGEKWLRLNQ
GDEYLRLLGIIRTDDIGNNNTISSQRIADARIIYGGQGAIADSNAMGWASRYFNSPWFPL

Sequences:

>Translated_220_residues
MRWLWFLCFALLSGCMSHIPDKETKPGTKEWAPPEIDYSLPDAKDGSLYRPGFMLTLFKDKRAFREGDILTVALDEKTYS
SKKADTKTNKEQDMGMGLTGNIGSQSANADGKTSFSRGFNGAGSSTQQNQLSGSITVTVSKVLPNGTLLIRGEKWLRLNQ
GDEYLRLLGIIRTDDIGNNNTISSQRIADARIIYGGQGAIADSNAMGWASRYFNSPWFPL
>Mature_220_residues
MRWLWFLCFALLSGCMSHIPDKETKPGTKEWAPPEIDYSLPDAKDGSLYRPGFMLTLFKDKRAFREGDILTVALDEKTYS
SKKADTKTNKEQDMGMGLTGNIGSQSANADGKTSFSRGFNGAGSSTQQNQLSGSITVTVSKVLPNGTLLIRGEKWLRLNQ
GDEYLRLLGIIRTDDIGNNNTISSQRIADARIIYGGQGAIADSNAMGWASRYFNSPWFPL

Specific function: Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation [H]

COG id: COG2063

COG function: function code N; Flagellar basal body L-ring protein

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor (Probable). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flgH family [H]

Homologues:

Organism=Escherichia coli, GI1787319, Length=219, Percent_Identity=36.986301369863, Blast_Score=108, Evalue=4e-25,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000527 [H]

Pfam domain/function: PF02107 FlgH [H]

EC number: NA

Molecular weight: Translated: 24260; Mature: 24260

Theoretical pI: Translated: 9.04; Mature: 9.04

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRWLWFLCFALLSGCMSHIPDKETKPGTKEWAPPEIDYSLPDAKDGSLYRPGFMLTLFKD
CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCEEEEEECC
KRAFREGDILTVALDEKTYSSKKADTKTNKEQDMGMGLTGNIGSQSANADGKTSFSRGFN
CHHHCCCCEEEEEECCCCCCCCCCCCCCCCHHHCCCCEECCCCCCCCCCCCCCHHHCCCC
GAGSSTQQNQLSGSITVTVSKVLPNGTLLIRGEKWLRLNQGDEYLRLLGIIRTDDIGNNN
CCCCCCCHHHCCCEEEEEEEEECCCCEEEEECCCEEEECCCHHHHHHHHHHCCCCCCCCC
TISSQRIADARIIYGGQGAIADSNAMGWASRYFNSPWFPL
CCCCHHCCCEEEEECCCCCCCCCCCCHHHHHHCCCCCCCC
>Mature Secondary Structure
MRWLWFLCFALLSGCMSHIPDKETKPGTKEWAPPEIDYSLPDAKDGSLYRPGFMLTLFKD
CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCEEEEEECC
KRAFREGDILTVALDEKTYSSKKADTKTNKEQDMGMGLTGNIGSQSANADGKTSFSRGFN
CHHHCCCCEEEEEECCCCCCCCCCCCCCCCHHHCCCCEECCCCCCCCCCCCCCHHHCCCC
GAGSSTQQNQLSGSITVTVSKVLPNGTLLIRGEKWLRLNQGDEYLRLLGIIRTDDIGNNN
CCCCCCCHHHCCCEEEEEEEEECCCCEEEEECCCEEEECCCHHHHHHHHHHCCCCCCCCC
TISSQRIADARIIYGGQGAIADSNAMGWASRYFNSPWFPL
CCCCHHCCCEEEEECCCCCCCCCCCCHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12620739 [H]