Definition Shewanella baltica OS155 chromosome, complete genome.
Accession NC_009052
Length 5,127,376

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The map label for this gene is 126176116

Identifier: 126176116

GI number: 126176116

Start: 4619857

End: 4620393

Strand: Direct

Name: 126176116

Synonym: Sbal_3926

Alternate gene names: NA

Gene position: 4619857-4620393 (Clockwise)

Preceding gene: 126176115

Following gene: 126176119

Centisome position: 90.1

GC content: 44.13

Gene sequence:

>537_bases
ATGCACAATAACGTTAAGGCATTCCTAGCCACTACTGCCTTATTTTTTAGTTGTCAGGTACTAGCCAATGGTGGCTGTGG
ATTTGAAGAACAACAACAGGGCTTAATTGCGACCTGCAGCGAGGAGAAACAAGAAGTGATTTTAACTGGCATAGTCGAAG
CACAACATTTAGTCACAGATCTCAATGAGTTTGCCGAAGGGTATAAAAGCTATCAAGTCGACACTGCGGCAATCACCCCG
CTTAAAAGCGTCACCGAACCAACTGAAATTATTGTGATCATTGGTACTTGGTGTCCAGATTGTCACCGTGAAACACCGCG
CTTTATCCGTATCATGGAAGAAGTCGCCAATCCCAATATCAAAGTGACCTATATTGGTGTCGACCGGACGAAGAAAGATC
CCGAAGGCTTAGCTGCCAAATACGACTTTACCCGTATTCCAACCTTTATTGTGCTACAGCAAGGTAAAGAAGTTGGCCGT
ATCGTAGAGCGCCCAACCGTTTCCTTAGAAAAAGATCTCGCCGATTTATTGAAATAA

Upstream 100 bases:

>100_bases
CGTGATCTAGCTTGCAGCAAATCAATGATCCGCTTTAATCGCATCAAGAATAATGTTTGAATCAAGCTTCATTCTTTCTC
TTCGATTTTAAGGGCACATC

Downstream 100 bases:

>100_bases
GCGACGCAGTACACACAATAAAGGCCGCATAGCGGCCTTTGGTTTTTATCCATCAGAGAAAGCTTAGCTCGCTTCGTCAA
TAATTCGCTGCGCGAGCATC

Product: hypothetical protein

Products: NA

Alternate protein names: Thioredoxin-Like Protein

Number of amino acids: Translated: 178; Mature: 178

Protein sequence:

>178_residues
MHNNVKAFLATTALFFSCQVLANGGCGFEEQQQGLIATCSEEKQEVILTGIVEAQHLVTDLNEFAEGYKSYQVDTAAITP
LKSVTEPTEIIVIIGTWCPDCHRETPRFIRIMEEVANPNIKVTYIGVDRTKKDPEGLAAKYDFTRIPTFIVLQQGKEVGR
IVERPTVSLEKDLADLLK

Sequences:

>Translated_178_residues
MHNNVKAFLATTALFFSCQVLANGGCGFEEQQQGLIATCSEEKQEVILTGIVEAQHLVTDLNEFAEGYKSYQVDTAAITP
LKSVTEPTEIIVIIGTWCPDCHRETPRFIRIMEEVANPNIKVTYIGVDRTKKDPEGLAAKYDFTRIPTFIVLQQGKEVGR
IVERPTVSLEKDLADLLK
>Mature_178_residues
MHNNVKAFLATTALFFSCQVLANGGCGFEEQQQGLIATCSEEKQEVILTGIVEAQHLVTDLNEFAEGYKSYQVDTAAITP
LKSVTEPTEIIVIIGTWCPDCHRETPRFIRIMEEVANPNIKVTYIGVDRTKKDPEGLAAKYDFTRIPTFIVLQQGKEVGR
IVERPTVSLEKDLADLLK

Specific function: Unknown

COG id: COG0526

COG function: function code OC; Thiol-disulfide isomerase and thioredoxins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19831; Mature: 19831

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHNNVKAFLATTALFFSCQVLANGGCGFEEQQQGLIATCSEEKQEVILTGIVEAQHLVTD
CCCCHHHHHHHHHHHHHHHHEECCCCCCCHHHCCEEEECCCCHHHHHHHHHHHHHHHHHH
LNEFAEGYKSYQVDTAAITPLKSVTEPTEIIVIIGTWCPDCHRETPRFIRIMEEVANPNI
HHHHHHHHHHCCCCHHHHCCHHHCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCE
KVTYIGVDRTKKDPEGLAAKYDFTRIPTFIVLQQGKEVGRIVERPTVSLEKDLADLLK
EEEEEECCCCCCCCCCCEEECCHHHCCEEEEEECCHHHHHHHCCCCCHHHHHHHHHCC
>Mature Secondary Structure
MHNNVKAFLATTALFFSCQVLANGGCGFEEQQQGLIATCSEEKQEVILTGIVEAQHLVTD
CCCCHHHHHHHHHHHHHHHHEECCCCCCCHHHCCEEEECCCCHHHHHHHHHHHHHHHHHH
LNEFAEGYKSYQVDTAAITPLKSVTEPTEIIVIIGTWCPDCHRETPRFIRIMEEVANPNI
HHHHHHHHHHCCCCHHHHCCHHHCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCE
KVTYIGVDRTKKDPEGLAAKYDFTRIPTFIVLQQGKEVGRIVERPTVSLEKDLADLLK
EEEEEECCCCCCCCCCCEEECCHHHCCEEEEEECCHHHHHHHCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA