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The map label for this gene is ylbK [H]

Identifier: 126176099

GI number: 126176099

Start: 4594565

End: 4596781

Strand: Reverse

Name: ylbK [H]

Synonym: Sbal_3909

Alternate gene names: 126176099

Gene position: 4596781-4594565 (Counterclockwise)

Preceding gene: 126176100

Following gene: 126176098

Centisome position: 89.65

GC content: 47.23

Gene sequence:

>2217_bases
ATGATGCGTCAACTACTCGCTTCTATTATTTTGTGTTTGTGCATGACTCCGTCGATGGCGGCAGAGCGCCTTAAAATTGG
TGTCGTACTCAGTGGCGGCGGTGCTAAAGGCGCTGCCCATGTGGGGGTGCTCAAAATATTAGAAGAACATAACATCCCGG
TCGATTACATCGCGGGCACCAGTATCGGTGCCTATGTCGCAGGCATGTACTCCTTGGGTTACAGCGCCAGCGAAGTCGAA
GCAATCATGATGGGTGTTGATTGGGACAGTGGCTACTCGGATACTATCCCGCGCAATATTTTGAGTTATAGGGATAAACA
GTTACGCGATCGCTACAACATTCCACTGAACATTGGTTATAACGAAGGCCAAGTAAGGGCGCCAAGTGGGTTGCTGCGTG
GTCAAACTATGTCGCAACTTCTGCGTCAGTCTACGGATCTAGTACAGCAGTTTGGTAATTTCGATGATTTAGCCATTCCC
TACCGTGCAGTGGCGACCGATTTAGAAACCAGCTTACCTGTGGTGATCAGTCACGGCAGTATGGTCAAAGCCATGCAAGC
CTCTGCGACGGTTCCCGGTGCGCTGCAGCCCGCTCAAATTGACGGTAAGTTATTGGTCGATGGCGGTATTGCCAACAATA
TGCCTGTCGATGTCGTTAAGGCCATGGGCGCCGATATTATTATTGCGGTCGATATTGGTTCACCTCTGGTCAAAAAAGAT
AAATTAGACAGCACTATTGCCGTGCTCGATCAGCTCTCCAACTTTTTAACCAATGCCAGCACCGAAAAACAAAAACTGCT
GCTGACTGATAAAGATGTATTGATCCGTCCCGCGATCGACGCCCTCAGCACCACTGATTTCACTATCATGCCCTTGGCAT
TAACGCTCGGCAAAGAAGCCGCTAATGGACAGCTTGATAAGCTGAGCAGCATGAGCGTGAGCCCTGAGGAATATGCCGCC
TACGTCGAGGCCAAACAAGCCAAAGGTAAGTTGTTAATGGCGGATGTGCGTCATTCCGTTAATGAAATTGTCTTCGATAA
CCAATCTAAGGTGAGTCTGAATCTCTTAACGGAAACCTTGAACATTAAACCTGGGCAAGCTGTGTCTAAGGACGAGCTGA
ATGAGGCGTTAAAGCGTATTTACTCTCTCAATAAGTTTGAGCGTGTCGATGCTGAGTTTGTCGAGGCTGAAGACGGCCGT
GTACTGACTGTGACCACTAAAGCTAAGTCTTGGGGGCCAAATTATTTCCAATTGGGCTTTAACTGGGAGGATGATTTTAA
CTCTGAATCTGCCATCAGTTTTGACATGGCCTATACCATGACGGATTTGACCTTCAATGGCGGCGAGTGGCGCAATGAAA
TCAAACTCGGTATGGAAAAGTTGTTTGCGACTGAGTTCTATCAGCCCTTAGACAGAGACCAACAATTCTTTAGCCGCGCT
CGTTATCAATACGATACCCGTAATTGGGACTTATACGATAATAACAATCGTCTGCTAACCTTCGACAAGAAAACCCACAC
CATAGAACTGGGTATCGGCTACAACTACACCTCACAGGGCACGATTGAACTGGGTTTAGTGGCGGAGAAGGGCGCGATAA
TTAATGATGCCTGGCTGTTACGGGACTTGGATTTTAGCTCCTATGGGGCTTACTTTAGATTCGGCTACGACAGCTTAGAC
AGTATTAGTTTCCCGACATCGGGTAATCGCGTGACCTTAAACGTCTATGTGCGCAATGAAGATTTCGATGACATTATCGA
CGATAACCAAAACGAATACAGTGTGCAGATAGAGGCCGACTGGAAGGGCGCCTTGAGTGTCGGCAATCATGCTTTTGTGG
GCAAGGCATCGATTTCAACCAACGATAATGATGGGATGAATACACTGCATGTATCTGAACTGGGTGGATTTTTAAATCTA
TCTGGCTACCATAAAGACTCACTGACAGGCGCGCATAAAGTCTTTGGCGCCTTTGTTTATCAATATGATCTCGGGCGTGA
TGCGCTCGGAATGACAGATTATCCTTTGTATCTAGGTTGGAGTTTGGAAGCCGGTAATGTCTGGGATGAGCGCTCTGAAG
TCACTCTCACTGATCTGATTTATGCATCGAGTCTCTACATTGGTACTGATACTTCCATGGGACCTGCGGCAATCGGCTTT
GGGATCACAGATCTTGGCGATAAGTCCTTCTATTTATTTGTGGGTAAAAACTTCTAG

Upstream 100 bases:

>100_bases
TCTTATCACTAGTCGGTCCAGATAAAATATGACTGACGGTTAAATCGATAAGTTTGGTAATATAACTCGGATTTTTATCT
CATAAAAAAGTAACCTCACC

Downstream 100 bases:

>100_bases
CGAGTGATGCATGTGAGGTCTTGAGGGCATGACTGAGGTTGTGCCCTTATTTTTTGTGCGATGAAAATCCTAAACGGTCT
TGATGGCATAGTGCCTGAAT

Product: patatin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 738; Mature: 738

Protein sequence:

>738_residues
MMRQLLASIILCLCMTPSMAAERLKIGVVLSGGGAKGAAHVGVLKILEEHNIPVDYIAGTSIGAYVAGMYSLGYSASEVE
AIMMGVDWDSGYSDTIPRNILSYRDKQLRDRYNIPLNIGYNEGQVRAPSGLLRGQTMSQLLRQSTDLVQQFGNFDDLAIP
YRAVATDLETSLPVVISHGSMVKAMQASATVPGALQPAQIDGKLLVDGGIANNMPVDVVKAMGADIIIAVDIGSPLVKKD
KLDSTIAVLDQLSNFLTNASTEKQKLLLTDKDVLIRPAIDALSTTDFTIMPLALTLGKEAANGQLDKLSSMSVSPEEYAA
YVEAKQAKGKLLMADVRHSVNEIVFDNQSKVSLNLLTETLNIKPGQAVSKDELNEALKRIYSLNKFERVDAEFVEAEDGR
VLTVTTKAKSWGPNYFQLGFNWEDDFNSESAISFDMAYTMTDLTFNGGEWRNEIKLGMEKLFATEFYQPLDRDQQFFSRA
RYQYDTRNWDLYDNNNRLLTFDKKTHTIELGIGYNYTSQGTIELGLVAEKGAIINDAWLLRDLDFSSYGAYFRFGYDSLD
SISFPTSGNRVTLNVYVRNEDFDDIIDDNQNEYSVQIEADWKGALSVGNHAFVGKASISTNDNDGMNTLHVSELGGFLNL
SGYHKDSLTGAHKVFGAFVYQYDLGRDALGMTDYPLYLGWSLEAGNVWDERSEVTLTDLIYASSLYIGTDTSMGPAAIGF
GITDLGDKSFYLFVGKNF

Sequences:

>Translated_738_residues
MMRQLLASIILCLCMTPSMAAERLKIGVVLSGGGAKGAAHVGVLKILEEHNIPVDYIAGTSIGAYVAGMYSLGYSASEVE
AIMMGVDWDSGYSDTIPRNILSYRDKQLRDRYNIPLNIGYNEGQVRAPSGLLRGQTMSQLLRQSTDLVQQFGNFDDLAIP
YRAVATDLETSLPVVISHGSMVKAMQASATVPGALQPAQIDGKLLVDGGIANNMPVDVVKAMGADIIIAVDIGSPLVKKD
KLDSTIAVLDQLSNFLTNASTEKQKLLLTDKDVLIRPAIDALSTTDFTIMPLALTLGKEAANGQLDKLSSMSVSPEEYAA
YVEAKQAKGKLLMADVRHSVNEIVFDNQSKVSLNLLTETLNIKPGQAVSKDELNEALKRIYSLNKFERVDAEFVEAEDGR
VLTVTTKAKSWGPNYFQLGFNWEDDFNSESAISFDMAYTMTDLTFNGGEWRNEIKLGMEKLFATEFYQPLDRDQQFFSRA
RYQYDTRNWDLYDNNNRLLTFDKKTHTIELGIGYNYTSQGTIELGLVAEKGAIINDAWLLRDLDFSSYGAYFRFGYDSLD
SISFPTSGNRVTLNVYVRNEDFDDIIDDNQNEYSVQIEADWKGALSVGNHAFVGKASISTNDNDGMNTLHVSELGGFLNL
SGYHKDSLTGAHKVFGAFVYQYDLGRDALGMTDYPLYLGWSLEAGNVWDERSEVTLTDLIYASSLYIGTDTSMGPAAIGF
GITDLGDKSFYLFVGKNF
>Mature_738_residues
MMRQLLASIILCLCMTPSMAAERLKIGVVLSGGGAKGAAHVGVLKILEEHNIPVDYIAGTSIGAYVAGMYSLGYSASEVE
AIMMGVDWDSGYSDTIPRNILSYRDKQLRDRYNIPLNIGYNEGQVRAPSGLLRGQTMSQLLRQSTDLVQQFGNFDDLAIP
YRAVATDLETSLPVVISHGSMVKAMQASATVPGALQPAQIDGKLLVDGGIANNMPVDVVKAMGADIIIAVDIGSPLVKKD
KLDSTIAVLDQLSNFLTNASTEKQKLLLTDKDVLIRPAIDALSTTDFTIMPLALTLGKEAANGQLDKLSSMSVSPEEYAA
YVEAKQAKGKLLMADVRHSVNEIVFDNQSKVSLNLLTETLNIKPGQAVSKDELNEALKRIYSLNKFERVDAEFVEAEDGR
VLTVTTKAKSWGPNYFQLGFNWEDDFNSESAISFDMAYTMTDLTFNGGEWRNEIKLGMEKLFATEFYQPLDRDQQFFSRA
RYQYDTRNWDLYDNNNRLLTFDKKTHTIELGIGYNYTSQGTIELGLVAEKGAIINDAWLLRDLDFSSYGAYFRFGYDSLD
SISFPTSGNRVTLNVYVRNEDFDDIIDDNQNEYSVQIEADWKGALSVGNHAFVGKASISTNDNDGMNTLHVSELGGFLNL
SGYHKDSLTGAHKVFGAFVYQYDLGRDALGMTDYPLYLGWSLEAGNVWDERSEVTLTDLIYASSLYIGTDTSMGPAAIGF
GITDLGDKSFYLFVGKNF

Specific function: Unknown

COG id: COG1752

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 patatin domain [H]

Homologues:

Organism=Homo sapiens, GI260656039, Length=211, Percent_Identity=34.1232227488152, Blast_Score=110, Evalue=4e-24,
Organism=Homo sapiens, GI260656041, Length=211, Percent_Identity=34.1232227488152, Blast_Score=110, Evalue=4e-24,
Organism=Homo sapiens, GI116256487, Length=211, Percent_Identity=34.1232227488152, Blast_Score=110, Evalue=4e-24,
Organism=Homo sapiens, GI260656043, Length=211, Percent_Identity=34.1232227488152, Blast_Score=110, Evalue=5e-24,
Organism=Homo sapiens, GI260656037, Length=211, Percent_Identity=34.1232227488152, Blast_Score=110, Evalue=5e-24,
Organism=Homo sapiens, GI148727335, Length=286, Percent_Identity=31.1188811188811, Blast_Score=110, Evalue=5e-24,
Organism=Homo sapiens, GI148727290, Length=286, Percent_Identity=31.1188811188811, Blast_Score=109, Evalue=8e-24,
Organism=Escherichia coli, GI226510936, Length=325, Percent_Identity=25.8461538461538, Blast_Score=101, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI71997299, Length=290, Percent_Identity=28.6206896551724, Blast_Score=84, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI71997289, Length=290, Percent_Identity=28.6206896551724, Blast_Score=84, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI193204778, Length=210, Percent_Identity=30.4761904761905, Blast_Score=76, Evalue=6e-14,
Organism=Saccharomyces cerevisiae, GI6323581, Length=287, Percent_Identity=28.9198606271777, Blast_Score=99, Evalue=3e-21,
Organism=Drosophila melanogaster, GI28571388, Length=213, Percent_Identity=32.3943661971831, Blast_Score=86, Evalue=1e-16,
Organism=Drosophila melanogaster, GI281376913, Length=213, Percent_Identity=31.924882629108, Blast_Score=82, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016035
- InterPro:   IPR001423
- InterPro:   IPR002641 [H]

Pfam domain/function: PF01734 Patatin [H]

EC number: NA

Molecular weight: Translated: 81359; Mature: 81359

Theoretical pI: Translated: 4.46; Mature: 4.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMRQLLASIILCLCMTPSMAAERLKIGVVLSGGGAKGAAHVGVLKILEEHNIPVDYIAGT
CHHHHHHHHHHHHHCCCHHHHCEEEEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEECC
SIGAYVAGMYSLGYSASEVEAIMMGVDWDSGYSDTIPRNILSYRDKQLRDRYNIPLNIGY
CHHHHHHHHHHCCCCHHCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEECC
NEGQVRAPSGLLRGQTMSQLLRQSTDLVQQFGNFDDLAIPYRAVATDLETSLPVVISHGS
CCCCEECCCCHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCEEEECCC
MVKAMQASATVPGALQPAQIDGKLLVDGGIANNMPVDVVKAMGADIIIAVDIGSPLVKKD
HHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHCCCCEEEEEECCCCCCCHH
KLDSTIAVLDQLSNFLTNASTEKQKLLLTDKDVLIRPAIDALSTTDFTIMPLALTLGKEA
CCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCEEEECCHHHHCCCCEEEEEEEEECCCCC
ANGQLDKLSSMSVSPEEYAAYVEAKQAKGKLLMADVRHSVNEIVFDNQSKVSLNLLTETL
CCCCHHHHHCCCCCHHHHHHHHHHHHCCCCEEEHHHHHHHHHHEECCCCEEEEEEEEEEE
NIKPGQAVSKDELNEALKRIYSLNKFERVDAEFVEAEDGRVLTVTTKAKSWGPNYFQLGF
CCCCCCCCCHHHHHHHHHHHHCCCHHHHCCHHHEECCCCEEEEEEECCCCCCCCEEEEEC
NWEDDFNSESAISFDMAYTMTDLTFNGGEWRNEIKLGMEKLFATEFYQPLDRDQQFFSRA
CCCCCCCCCCEEEEEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
RYQYDTRNWDLYDNNNRLLTFDKKTHTIELGIGYNYTSQGTIELGLVAEKGAIINDAWLL
HCEECCCCCCEEECCCEEEEEECCCEEEEEEECCCCCCCCEEEEEEEECCCCEEECEEEE
RDLDFSSYGAYFRFGYDSLDSISFPTSGNRVTLNVYVRNEDFDDIIDDNQNEYSVQIEAD
EECCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEEEEECCCCHHHHCCCCCEEEEEEEEC
WKGALSVGNHAFVGKASISTNDNDGMNTLHVSELGGFLNLSGYHKDSLTGAHKVFGAFVY
CCCEEECCCEEEEEEEEECCCCCCCCCEEEHHHCCCEEEECCCCCCCCCHHHHHHHEEEE
QYDLGRDALGMTDYPLYLGWSLEAGNVWDERSEVTLTDLIYASSLYIGTDTSMGPAAIGF
EEECCCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEEHHHEECEEEEECCCCCCCHHEEC
GITDLGDKSFYLFVGKNF
CCCCCCCCEEEEEEECCC
>Mature Secondary Structure
MMRQLLASIILCLCMTPSMAAERLKIGVVLSGGGAKGAAHVGVLKILEEHNIPVDYIAGT
CHHHHHHHHHHHHHCCCHHHHCEEEEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEECC
SIGAYVAGMYSLGYSASEVEAIMMGVDWDSGYSDTIPRNILSYRDKQLRDRYNIPLNIGY
CHHHHHHHHHHCCCCHHCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEECC
NEGQVRAPSGLLRGQTMSQLLRQSTDLVQQFGNFDDLAIPYRAVATDLETSLPVVISHGS
CCCCEECCCCHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCEEEECCC
MVKAMQASATVPGALQPAQIDGKLLVDGGIANNMPVDVVKAMGADIIIAVDIGSPLVKKD
HHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHCCCCEEEEEECCCCCCCHH
KLDSTIAVLDQLSNFLTNASTEKQKLLLTDKDVLIRPAIDALSTTDFTIMPLALTLGKEA
CCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCEEEECCHHHHCCCCEEEEEEEEECCCCC
ANGQLDKLSSMSVSPEEYAAYVEAKQAKGKLLMADVRHSVNEIVFDNQSKVSLNLLTETL
CCCCHHHHHCCCCCHHHHHHHHHHHHCCCCEEEHHHHHHHHHHEECCCCEEEEEEEEEEE
NIKPGQAVSKDELNEALKRIYSLNKFERVDAEFVEAEDGRVLTVTTKAKSWGPNYFQLGF
CCCCCCCCCHHHHHHHHHHHHCCCHHHHCCHHHEECCCCEEEEEEECCCCCCCCEEEEEC
NWEDDFNSESAISFDMAYTMTDLTFNGGEWRNEIKLGMEKLFATEFYQPLDRDQQFFSRA
CCCCCCCCCCEEEEEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
RYQYDTRNWDLYDNNNRLLTFDKKTHTIELGIGYNYTSQGTIELGLVAEKGAIINDAWLL
HCEECCCCCCEEECCCEEEEEECCCEEEEEEECCCCCCCCEEEEEEEECCCCEEECEEEE
RDLDFSSYGAYFRFGYDSLDSISFPTSGNRVTLNVYVRNEDFDDIIDDNQNEYSVQIEAD
EECCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEEEEECCCCHHHHCCCCCEEEEEEEEC
WKGALSVGNHAFVGKASISTNDNDGMNTLHVSELGGFLNLSGYHKDSLTGAHKVFGAFVY
CCCEEECCCEEEEEEEEECCCCCCCCCEEEHHHCCCEEEECCCCCCCCCHHHHHHHEEEE
QYDLGRDALGMTDYPLYLGWSLEAGNVWDERSEVTLTDLIYASSLYIGTDTSMGPAAIGF
EEECCCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEEHHHEECEEEEECCCCCCCHHEEC
GITDLGDKSFYLFVGKNF
CCCCCCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]