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The map label for this gene is 126176015

Identifier: 126176015

GI number: 126176015

Start: 4497712

End: 4498191

Strand: Reverse

Name: 126176015

Synonym: Sbal_3824

Alternate gene names: NA

Gene position: 4498191-4497712 (Counterclockwise)

Preceding gene: 126176016

Following gene: 126176014

Centisome position: 87.73

GC content: 50.62

Gene sequence:

>480_bases
ATGTTCCTTAATTCACATCGTCGCTCGGTAGGGCGTAACTCAGTATCCAGATCATCATTATCAAGATCAAAATCTTATGC
TCTGCCTGTGCGGCAGCGTGGCAGTGCGTTAATCATTGGCGTGTTTGTGATTACCGTGATGTTTCTGCTGGCATCGGCAC
TGATCAATATTGTGGAAGACGGTGATGTTGGGCTCACCCAAGAAGTATGGGGGGCGCGTGCCTTTGCGGCGGCGAACAGT
GGCGCCGATGCGGCGCTGGCTAAGTTGTTTCCATTGAATGGTAACATCGGAACGTGTTTAGCATCAGATGTTTGGACGCC
GCCCGATGTAACTGGTTTTCATGCCTGTAGTGTGACGTTGACTTGTACAGCATATGCGCTAGACACAGTCACTCAATATC
GAATCAGCAGTAAAGCGGTATGCGAAAGCGGCGAAACGCGCGTCAGCCGACAAGTTGAGGTAGAAGCCCGTGGGAATTAA

Upstream 100 bases:

>100_bases
ACGCCATCGAGTCTAGTCAATAATGCTATGGTGCACTTGCAGCCAAGATTTAATGTTAATGGTGAGACGTTCCAATATCG
ACATCAAGTGCAGGTGATCA

Downstream 100 bases:

>100_bases
TCTTTTTCATCGTGCCATATTGGCAGTACTTATCTTGAGTTTCCCTTCTGCTGTGATGGCATTCGACCCTATTGACCAGA
GTGTTATTTTTGCCAAGGTT

Product: MSHA biogenesis protein MshP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 159; Mature: 159

Protein sequence:

>159_residues
MFLNSHRRSVGRNSVSRSSLSRSKSYALPVRQRGSALIIGVFVITVMFLLASALINIVEDGDVGLTQEVWGARAFAAANS
GADAALAKLFPLNGNIGTCLASDVWTPPDVTGFHACSVTLTCTAYALDTVTQYRISSKAVCESGETRVSRQVEVEARGN

Sequences:

>Translated_159_residues
MFLNSHRRSVGRNSVSRSSLSRSKSYALPVRQRGSALIIGVFVITVMFLLASALINIVEDGDVGLTQEVWGARAFAAANS
GADAALAKLFPLNGNIGTCLASDVWTPPDVTGFHACSVTLTCTAYALDTVTQYRISSKAVCESGETRVSRQVEVEARGN
>Mature_159_residues
MFLNSHRRSVGRNSVSRSSLSRSKSYALPVRQRGSALIIGVFVITVMFLLASALINIVEDGDVGLTQEVWGARAFAAANS
GADAALAKLFPLNGNIGTCLASDVWTPPDVTGFHACSVTLTCTAYALDTVTQYRISSKAVCESGETRVSRQVEVEARGN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16912; Mature: 16912

Theoretical pI: Translated: 8.66; Mature: 8.66

Prosite motif: PS00338 SOMATOTROPIN_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFLNSHRRSVGRNSVSRSSLSRSKSYALPVRQRGSALIIGVFVITVMFLLASALINIVED
CCCCCHHHHHCCCHHHHHHHHHCCCCCCCHHHCCCEEEHHHHHHHHHHHHHHHHHHHHCC
GDVGLTQEVWGARAFAAANSGADAALAKLFPLNGNIGTCLASDVWTPPDVTGFHACSVTL
CCCCCHHHHHCCHHHHHCCCCCHHHHHHEECCCCCCCHHEECCCCCCCCCCCEEEEEEEE
TCTAYALDTVTQYRISSKAVCESGETRVSRQVEVEARGN
EEHHHHHHHHHHHHHCCHHHHCCCCCCCCEEEEEEECCC
>Mature Secondary Structure
MFLNSHRRSVGRNSVSRSSLSRSKSYALPVRQRGSALIIGVFVITVMFLLASALINIVED
CCCCCHHHHHCCCHHHHHHHHHCCCCCCCHHHCCCEEEHHHHHHHHHHHHHHHHHHHHCC
GDVGLTQEVWGARAFAAANSGADAALAKLFPLNGNIGTCLASDVWTPPDVTGFHACSVTL
CCCCCHHHHHCCHHHHHCCCCCHHHHHHEECCCCCCCHHEECCCCCCCCCCCEEEEEEEE
TCTAYALDTVTQYRISSKAVCESGETRVSRQVEVEARGN
EEHHHHHHHHHHHHHCCHHHHCCCCCCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA