| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is metL [H]
Identifier: 126175968
GI number: 126175968
Start: 4431674
End: 4434067
Strand: Reverse
Name: metL [H]
Synonym: Sbal_3775
Alternate gene names: 126175968
Gene position: 4434067-4431674 (Counterclockwise)
Preceding gene: 126175969
Following gene: 126175967
Centisome position: 86.48
GC content: 51.71
Gene sequence:
>2394_bases ATGGCACGTTGTCACTTACATAAATTTGGTGGCTCCAGTTTAGCGGATGCCGATTGTTATCGCCGAGTCGCCCATATCCT GTTAACCCACGGTCATAGCGATGACCTTGTGGTGGTCTCTGCGGCGGGTAAGAGCACGAATTTCCTGTATAAATTATTAG CGCTGCGCGACGTGGGTCAGTTGTGGCAAGAAGAATTACAAGTGCTGACCAGCTATCAACAGGGGTTGGTAGAGCAGTTA TTGTCGAACGAACAAGCCCGCGATCTGCGTGAGCGTTTGGCGACAGATCAGGCGCAGCTCATCAGTTTATTGTCCCTCGA TGAACGCAACGAATACCAAGTTAACCATGTGGTGAGCTTTGGCGAGCGTTGGTCGGCGCGCTTGATGGCGGCGCTGCTGC GCGAATCTGGTGTGGCGGCAAGCCATGTGGATGCCTGTTCAATTTTAGTGGCCGATGAAGCCGCCGTGCCACAAATTCGG GTGCAGGAATCCCGCGCAAAAGTACAAGCGCTGTTGGCCGCCCACCCAAATGAACGACTAGTGATCACAGGCTTTATCTG CGCTAACGAGCGTGGCGATACTTTATTACTTGGTCGTAATGGTTCCGATTTTAGCGCTAGCTTGATTGCCAGCCTTGCCG ATATTGAGCGCGTGACCATTTGGACCGATGTGGAAGGGGTGTTCAACGCTGACCCGAATAAAATCAACGATGCTAAATTA CTAAAAAGCATGTCACTTGCCGAAGCTGACCGCTTAGCGCGTTTAGGCTCGCCGGTATTGCATTCGCGCACTTTGCAGCC TCTGTTTAATACCGAAGTGAGTTTAGCGGTGCGCTCAAGTTATGCATCGCACACCGACTTTACCTTGATTGCGCCCCACA GTTCGTCGGCGAGCGCGCCTGTGGTGACTAACCTCAATGCTGTTGTCCTGTTCGGCTTTAAGCTCACGGGCGAATTAACA AGCTTACTAGATTCGTTGATCGCCGCAGGTTTAACGCCATTGGCCCATTGGACCTCAGCCCATCAAAGGGTTGAGCTTGC CTATACCGCTGAAAATCAAAAACAAGTACAAAGATTACTCGACGCCGAGGCACAAGTATTAGGGATCAGCGATCAGCAGA TCAACACAGATCTCGGCCTAGTGGCGTTAGTCAGTGCCGATGCCGAACATTATCGCCGCAGCTTCGCCCGTTTATTAAGT CGTGACGCTAAACCTTTGTTTAGTGGCGACTTAAGCTTAGTGACGCTGGTGCCTCAGTCGCAGGTGAATCTGTTAACGCA AAAGGTCCACCGTCGCTGCGCTGGGCCGCGTAAACGCATTGGTGTCTTACTGCTCGGCGTGGGCAACATAGGTGAGGCTT GGGTCGATTTGTTTAAGTCGGTGTCGCCATCACTGGATCATGAACTCGAAGCTAGCGTTGAGTTAGTCGGCTTAGTCAGT TCGAGTAAAGCCTTGATTAAATCCACAGGCATTAATCTTGCCGCGTGGCAGACTGAGTTTAATACCGAGGCAACACCTTG GCAGTACGAGCACTTGTTCGAGCAATTAGAACGGGTTAACTGCGATGAGCTGGTGGCCTTAGATATCAGTGCCAGCGCCA GTTTGACGCTGCAATATCCAGAGCTATTCGAGCGCGGCATCCATGTGGTGAGCGCGAATAAACTCGCAGGCTCGGGTCCA CTGCCTTTTTACCGTGAGTTAAAGCAGCAACTGGGTAATCGTCGTTTATTTTGGCGCTATAACGCCAGTTGCGGCGCAGG TTTGCCTATCCAACATGCGTTAAATGATCTGCGTAACAGCGGTGATAGCGTTGAAGCCGTGGGCGGGATTTTCTCTGGCA CCTTGTGTTGGTTGTTTGAGAAATACGATACCAGCAAGCCTTTCTCTGAGTTAGTGATTGAAGCCAGAGGCTTAGGTATC ACTGAGCCCGATCCCCGCGACGATCTGTCCGGTCGTGATATGCAGCGTAAACTGCTCATTTTGGCCCGTGAAATTGGCCT TGAAATCGAGCTTGAAGATATTGAACTGCGCTCATTAGTGCCAGCCGATTTGGCCGATATTCCCTTAGATCAATTTCTTG CCCGCATTGCCGAGTTAGATGCCGATCTGCTGCAACAATACGGTGCGGCGGCGGAGCAAAATAAGGTGCTCAGATACGTG GCATCCTTAGATAACAGCGGCCCAGAGCTTAAAGCTGAAGTCGGTTTGCAATGGATTGATGCCCATCATCCCTACGCTAA TTTGACTCCAGGCGATAACGTGTTTGTGATCCGCAGCGTCTTCTATCAAGGTAACCCGTTGATCATCCGTGGACCGGGCG CCGGACGCGAAGTGACAGCGGCGGCCGTGCAGTCGGATCTGACGCAGATCTGTCGCGATCTCTTGCAAGAGTAG
Upstream 100 bases:
>100_bases TATTGCGTTTATCGGTGGGTATTGAAGATGCCGCCGATTTAGTTGCAGATATTCAAGCAGGATTAGCCGCCGTTGCGGCT TGTCAGTAGAGGAATAATAG
Downstream 100 bases:
>100_bases ACTGAAATTCAGCAGCTTAAAGGACTCATTCGAGTCCTTTTTTATTGGCTAGAATAAATCTATCGAATTAACCGAGATTA AATGCGGTTTATGGACATTT
Product: bifunctional aspartate kinase II/homoserine dehydrogenase II
Products: NA
Alternate protein names: Aspartokinase II/homoserine dehydrogenase II; AKII-HDII; Aspartokinase; Homoserine dehydrogenase [H]
Number of amino acids: Translated: 797; Mature: 796
Protein sequence:
>797_residues MARCHLHKFGGSSLADADCYRRVAHILLTHGHSDDLVVVSAAGKSTNFLYKLLALRDVGQLWQEELQVLTSYQQGLVEQL LSNEQARDLRERLATDQAQLISLLSLDERNEYQVNHVVSFGERWSARLMAALLRESGVAASHVDACSILVADEAAVPQIR VQESRAKVQALLAAHPNERLVITGFICANERGDTLLLGRNGSDFSASLIASLADIERVTIWTDVEGVFNADPNKINDAKL LKSMSLAEADRLARLGSPVLHSRTLQPLFNTEVSLAVRSSYASHTDFTLIAPHSSSASAPVVTNLNAVVLFGFKLTGELT SLLDSLIAAGLTPLAHWTSAHQRVELAYTAENQKQVQRLLDAEAQVLGISDQQINTDLGLVALVSADAEHYRRSFARLLS RDAKPLFSGDLSLVTLVPQSQVNLLTQKVHRRCAGPRKRIGVLLLGVGNIGEAWVDLFKSVSPSLDHELEASVELVGLVS SSKALIKSTGINLAAWQTEFNTEATPWQYEHLFEQLERVNCDELVALDISASASLTLQYPELFERGIHVVSANKLAGSGP LPFYRELKQQLGNRRLFWRYNASCGAGLPIQHALNDLRNSGDSVEAVGGIFSGTLCWLFEKYDTSKPFSELVIEARGLGI TEPDPRDDLSGRDMQRKLLILAREIGLEIELEDIELRSLVPADLADIPLDQFLARIAELDADLLQQYGAAAEQNKVLRYV ASLDNSGPELKAEVGLQWIDAHHPYANLTPGDNVFVIRSVFYQGNPLIIRGPGAGREVTAAAVQSDLTQICRDLLQE
Sequences:
>Translated_797_residues MARCHLHKFGGSSLADADCYRRVAHILLTHGHSDDLVVVSAAGKSTNFLYKLLALRDVGQLWQEELQVLTSYQQGLVEQL LSNEQARDLRERLATDQAQLISLLSLDERNEYQVNHVVSFGERWSARLMAALLRESGVAASHVDACSILVADEAAVPQIR VQESRAKVQALLAAHPNERLVITGFICANERGDTLLLGRNGSDFSASLIASLADIERVTIWTDVEGVFNADPNKINDAKL LKSMSLAEADRLARLGSPVLHSRTLQPLFNTEVSLAVRSSYASHTDFTLIAPHSSSASAPVVTNLNAVVLFGFKLTGELT SLLDSLIAAGLTPLAHWTSAHQRVELAYTAENQKQVQRLLDAEAQVLGISDQQINTDLGLVALVSADAEHYRRSFARLLS RDAKPLFSGDLSLVTLVPQSQVNLLTQKVHRRCAGPRKRIGVLLLGVGNIGEAWVDLFKSVSPSLDHELEASVELVGLVS SSKALIKSTGINLAAWQTEFNTEATPWQYEHLFEQLERVNCDELVALDISASASLTLQYPELFERGIHVVSANKLAGSGP LPFYRELKQQLGNRRLFWRYNASCGAGLPIQHALNDLRNSGDSVEAVGGIFSGTLCWLFEKYDTSKPFSELVIEARGLGI TEPDPRDDLSGRDMQRKLLILAREIGLEIELEDIELRSLVPADLADIPLDQFLARIAELDADLLQQYGAAAEQNKVLRYV ASLDNSGPELKAEVGLQWIDAHHPYANLTPGDNVFVIRSVFYQGNPLIIRGPGAGREVTAAAVQSDLTQICRDLLQE >Mature_796_residues ARCHLHKFGGSSLADADCYRRVAHILLTHGHSDDLVVVSAAGKSTNFLYKLLALRDVGQLWQEELQVLTSYQQGLVEQLL SNEQARDLRERLATDQAQLISLLSLDERNEYQVNHVVSFGERWSARLMAALLRESGVAASHVDACSILVADEAAVPQIRV QESRAKVQALLAAHPNERLVITGFICANERGDTLLLGRNGSDFSASLIASLADIERVTIWTDVEGVFNADPNKINDAKLL KSMSLAEADRLARLGSPVLHSRTLQPLFNTEVSLAVRSSYASHTDFTLIAPHSSSASAPVVTNLNAVVLFGFKLTGELTS LLDSLIAAGLTPLAHWTSAHQRVELAYTAENQKQVQRLLDAEAQVLGISDQQINTDLGLVALVSADAEHYRRSFARLLSR DAKPLFSGDLSLVTLVPQSQVNLLTQKVHRRCAGPRKRIGVLLLGVGNIGEAWVDLFKSVSPSLDHELEASVELVGLVSS SKALIKSTGINLAAWQTEFNTEATPWQYEHLFEQLERVNCDELVALDISASASLTLQYPELFERGIHVVSANKLAGSGPL PFYRELKQQLGNRRLFWRYNASCGAGLPIQHALNDLRNSGDSVEAVGGIFSGTLCWLFEKYDTSKPFSELVIEARGLGIT EPDPRDDLSGRDMQRKLLILAREIGLEIELEDIELRSLVPADLADIPLDQFLARIAELDADLLQQYGAAAEQNKVLRYVA SLDNSGPELKAEVGLQWIDAHHPYANLTPGDNVFVIRSVFYQGNPLIIRGPGAGREVTAAAVQSDLTQICRDLLQE
Specific function: Catalyzes 2 nonconsecutive reactions in the common biosynthetic pathway leading from Asp to diaminopimelate and Lys, to Met, and to Thr and Ile. [C]
COG id: COG0460
COG function: function code E; Homoserine dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the homoserine dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI1790376, Length=805, Percent_Identity=41.9875776397516, Blast_Score=550, Evalue=1e-157, Organism=Escherichia coli, GI1786183, Length=311, Percent_Identity=38.2636655948553, Blast_Score=215, Evalue=1e-56, Organism=Escherichia coli, GI1790455, Length=293, Percent_Identity=32.7645051194539, Blast_Score=117, Evalue=2e-27, Organism=Saccharomyces cerevisiae, GI6322599, Length=345, Percent_Identity=32.463768115942, Blast_Score=167, Evalue=5e-42, Organism=Saccharomyces cerevisiae, GI6320893, Length=308, Percent_Identity=26.2987012987013, Blast_Score=91, Evalue=6e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001048 - InterPro: IPR005106 - InterPro: IPR001341 - InterPro: IPR018042 - InterPro: IPR011147 - InterPro: IPR001342 - InterPro: IPR019811 - InterPro: IPR016040 [H]
Pfam domain/function: PF00696 AA_kinase; PF00742 Homoserine_dh; PF03447 NAD_binding_3 [H]
EC number: =2.7.2.4; =1.1.1.3 [H]
Molecular weight: Translated: 87374; Mature: 87243
Theoretical pI: Translated: 5.20; Mature: 5.20
Prosite motif: PS01042 HOMOSER_DHGENASE ; PS00324 ASPARTOKINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARCHLHKFGGSSLADADCYRRVAHILLTHGHSDDLVVVSAAGKSTNFLYKLLALRDVGQ CCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHH LWQEELQVLTSYQQGLVEQLLSNEQARDLRERLATDQAQLISLLSLDERNEYQVNHVVSF HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEHHHHHHH GERWSARLMAALLRESGVAASHVDACSILVADEAAVPQIRVQESRAKVQALLAAHPNERL HHHHHHHHHHHHHHHCCCCHHCCCCEEEEEECCCCCCCEEEHHHHHHHHHHHHCCCCCEE VITGFICANERGDTLLLGRNGSDFSASLIASLADIERVTIWTDVEGVFNADPNKINDAKL EEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCHHHH LKSMSLAEADRLARLGSPVLHSRTLQPLFNTEVSLAVRSSYASHTDFTLIAPHSSSASAP HHHHHHHHHHHHHHCCCCHHHHHCCCHHHCCCEEEEEHHCCCCCCCEEEEECCCCCCCCC VVTNLNAVVLFGFKLTGELTSLLDSLIAAGLTPLAHWTSAHQRVELAYTAENQKQVQRLL EEECCCEEEEEEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHEEEEEEECCCHHHHHHHH DAEAQVLGISDQQINTDLGLVALVSADAEHYRRSFARLLSRDAKPLFSGDLSLVTLVPQS CCCCEEEECCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCH QVNLLTQKVHRRCAGPRKRIGVLLLGVGNIGEAWVDLFKSVSPSLDHELEASVELVGLVS HHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCCCCHHHCCEEEEEEEC SSKALIKSTGINLAAWQTEFNTEATPWQYEHLFEQLERVNCDELVALDISASASLTLQYP CCCHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEECH ELFERGIHVVSANKLAGSGPLPFYRELKQQLGNRRLFWRYNASCGAGLPIQHALNDLRNS HHHHCCCEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHCC GDSVEAVGGIFSGTLCWLFEKYDTSKPFSELVIEARGLGITEPDPRDDLSGRDMQRKLLI CCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHH LAREIGLEIELEDIELRSLVPADLADIPLDQFLARIAELDADLLQQYGAAAEQNKVLRYV HHHHHCCEEEEECCHHHHCCCCCHHCCCHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHH ASLDNSGPELKAEVGLQWIDAHHPYANLTPGDNVFVIRSVFYQGNPLIIRGPGAGREVTA HHHCCCCCCEEHHHCCEEEECCCCCCCCCCCCCEEEEEEEHCCCCEEEEECCCCCCHHHH AAVQSDLTQICRDLLQE HHHHHHHHHHHHHHHCC >Mature Secondary Structure ARCHLHKFGGSSLADADCYRRVAHILLTHGHSDDLVVVSAAGKSTNFLYKLLALRDVGQ CCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHH LWQEELQVLTSYQQGLVEQLLSNEQARDLRERLATDQAQLISLLSLDERNEYQVNHVVSF HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEHHHHHHH GERWSARLMAALLRESGVAASHVDACSILVADEAAVPQIRVQESRAKVQALLAAHPNERL HHHHHHHHHHHHHHHCCCCHHCCCCEEEEEECCCCCCCEEEHHHHHHHHHHHHCCCCCEE VITGFICANERGDTLLLGRNGSDFSASLIASLADIERVTIWTDVEGVFNADPNKINDAKL EEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCHHHH LKSMSLAEADRLARLGSPVLHSRTLQPLFNTEVSLAVRSSYASHTDFTLIAPHSSSASAP HHHHHHHHHHHHHHCCCCHHHHHCCCHHHCCCEEEEEHHCCCCCCCEEEEECCCCCCCCC VVTNLNAVVLFGFKLTGELTSLLDSLIAAGLTPLAHWTSAHQRVELAYTAENQKQVQRLL EEECCCEEEEEEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHEEEEEEECCCHHHHHHHH DAEAQVLGISDQQINTDLGLVALVSADAEHYRRSFARLLSRDAKPLFSGDLSLVTLVPQS CCCCEEEECCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCH QVNLLTQKVHRRCAGPRKRIGVLLLGVGNIGEAWVDLFKSVSPSLDHELEASVELVGLVS HHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCCCCHHHCCEEEEEEEC SSKALIKSTGINLAAWQTEFNTEATPWQYEHLFEQLERVNCDELVALDISASASLTLQYP CCCHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEECH ELFERGIHVVSANKLAGSGPLPFYRELKQQLGNRRLFWRYNASCGAGLPIQHALNDLRNS HHHHCCCEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHCC GDSVEAVGGIFSGTLCWLFEKYDTSKPFSELVIEARGLGITEPDPRDDLSGRDMQRKLLI CCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHH LAREIGLEIELEDIELRSLVPADLADIPLDQFLARIAELDADLLQQYGAAAEQNKVLRYV HHHHHCCEEEEECCHHHHCCCCCHHCCCHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHH ASLDNSGPELKAEVGLQWIDAHHPYANLTPGDNVFVIRSVFYQGNPLIIRGPGAGREVTA HHHCCCCCCEEHHHCCEEEECCCCCCCCCCCCCEEEEEEEHCCCCEEEEECCCCCCHHHH AAVQSDLTQICRDLLQE HHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 6298218; 8346018; 9278503 [H]