| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is yfbL [C]
Identifier: 126175950
GI number: 126175950
Start: 4410142
End: 4411302
Strand: Direct
Name: yfbL [C]
Synonym: Sbal_3756
Alternate gene names: 126175950
Gene position: 4410142-4411302 (Clockwise)
Preceding gene: 126175949
Following gene: 126175951
Centisome position: 86.01
GC content: 49.61
Gene sequence:
>1161_bases ATGTTACCGAGCCTATATCAGTCAATCTGCCTAATCCTATGCAGCCAAAACCTCAGCGGCATAAATCTCAGCGGTATAAG CCCAAGCAGTATAAGCCTAGGCCCATCGACCTTATTCCGCCATACACGGCTTAGCCAGCGGCTCGCCAAGTTCCAAATCC CACGTCCTATAAAACATCAATCCCAACGATTTAGCATATTCGCACTGGCCTGCTTTGTGGCAGCGACTCTCAGCGGTTGC GCTAACTCACTAGAAACCTGTGCGCGCACTGAGCTTAAACTCACTTGGGCCGAGCCCGCAGAGTTACAAGCGACAGTGAC AATATTAAGCTCGGATGAATTTGAAGGCCGCAAAACCCAAACTCAAGGTGCAGCAAAAAGTCGTGACTATATAAAGCAGC AATTTGAGAGTCTCAATTTACAGCCTTGGGGAGCGGACTTTATCGTGCCCTTTGAATACCAAACCTTCTTCACCCAAGAA ACCGGCGCCAATGTGGTCGCCACCGCGATGGCGACAGAGCCGACGAATCGATGGCGTATTATCGTCGCTCACTATGATCA CTTAGGCATGAGCGGCAGCAAGATTTACCACGGCGCCGATGATAACGCCTCCGGCGTCGCCGCTATGCTCGCCATTGCCA AACATTGGCAGCAGCAATTTGCCCTGCAACCCAATACCTTGCCTAAGGTGAATCTAATGTTTGTGGCAACCGATGCCGAA GAACCGGGACTCTATGGCAGCATCGCCTTGGTTGAACAACTCAAAACCCGCCTACCAGAGGCGACATTTGAATTAATGAT TAACCTCGACATGGTGAGTCATCCCGGTAGGCCCTATGGGATTTACCTTGAAGGCAGTCGAAACTTCACTCAGTTCAATC AATTTAAATCCCTATTGAATCAACAAAACCGACTGTGCATTAAGCTCACGCACCCAAAACCCGTTGGCCGTAGCATACAA AGTACCGACTGGCTGCGGGCGTCGGATCATTATCCCTTCCACAAAGCCAATATCCCTTGGCTGTATTTTGGCGTGCCGAC CCATCCCCAATATCACACCCCTGAGGATACCGTCGCGACAATCGACATCACTTTTCTGGCGGCCGTGACTGAGTCAGCAT TTGAGTTACTTCAATTAAATGCCGAATATTTAAAGAATTAA
Upstream 100 bases:
>100_bases GCTTTAAGCAAAGATGACAGTTATCTTCAGGCGAAGGCATCAGCAATAAGGACAAGGAATATCCATGCGTGATAGTACTC AGCTCCCTGTTACCCGCCGT
Downstream 100 bases:
>100_bases TGGGAAGTGGCGCGTTTCTTGCTCAGTTTTAGCGAAAAAAATGCAGAAAACAGGTTAAATAGCGTGACTCTGATTGGTAA AGTGCCGTCCATGCTGCTAT
Product: peptidase M28
Products: NA
Alternate protein names: Aminopeptidase; Peptidase; M28 Family Peptidase; Peptidase Family M; M28 Family Aminopeptidase; Glutamate Carboxypeptidase II; WD40-Like Beta Propeller; M20/M25/M40 Family Peptidase; PDZ Domain-Containing Protein
Number of amino acids: Translated: 386; Mature: 386
Protein sequence:
>386_residues MLPSLYQSICLILCSQNLSGINLSGISPSSISLGPSTLFRHTRLSQRLAKFQIPRPIKHQSQRFSIFALACFVAATLSGC ANSLETCARTELKLTWAEPAELQATVTILSSDEFEGRKTQTQGAAKSRDYIKQQFESLNLQPWGADFIVPFEYQTFFTQE TGANVVATAMATEPTNRWRIIVAHYDHLGMSGSKIYHGADDNASGVAAMLAIAKHWQQQFALQPNTLPKVNLMFVATDAE EPGLYGSIALVEQLKTRLPEATFELMINLDMVSHPGRPYGIYLEGSRNFTQFNQFKSLLNQQNRLCIKLTHPKPVGRSIQ STDWLRASDHYPFHKANIPWLYFGVPTHPQYHTPEDTVATIDITFLAAVTESAFELLQLNAEYLKN
Sequences:
>Translated_386_residues MLPSLYQSICLILCSQNLSGINLSGISPSSISLGPSTLFRHTRLSQRLAKFQIPRPIKHQSQRFSIFALACFVAATLSGC ANSLETCARTELKLTWAEPAELQATVTILSSDEFEGRKTQTQGAAKSRDYIKQQFESLNLQPWGADFIVPFEYQTFFTQE TGANVVATAMATEPTNRWRIIVAHYDHLGMSGSKIYHGADDNASGVAAMLAIAKHWQQQFALQPNTLPKVNLMFVATDAE EPGLYGSIALVEQLKTRLPEATFELMINLDMVSHPGRPYGIYLEGSRNFTQFNQFKSLLNQQNRLCIKLTHPKPVGRSIQ STDWLRASDHYPFHKANIPWLYFGVPTHPQYHTPEDTVATIDITFLAAVTESAFELLQLNAEYLKN >Mature_386_residues MLPSLYQSICLILCSQNLSGINLSGISPSSISLGPSTLFRHTRLSQRLAKFQIPRPIKHQSQRFSIFALACFVAATLSGC ANSLETCARTELKLTWAEPAELQATVTILSSDEFEGRKTQTQGAAKSRDYIKQQFESLNLQPWGADFIVPFEYQTFFTQE TGANVVATAMATEPTNRWRIIVAHYDHLGMSGSKIYHGADDNASGVAAMLAIAKHWQQQFALQPNTLPKVNLMFVATDAE EPGLYGSIALVEQLKTRLPEATFELMINLDMVSHPGRPYGIYLEGSRNFTQFNQFKSLLNQQNRLCIKLTHPKPVGRSIQ STDWLRASDHYPFHKANIPWLYFGVPTHPQYHTPEDTVATIDITFLAAVTESAFELLQLNAEYLKN
Specific function: Unknown
COG id: COG2234
COG function: function code R; Predicted aminopeptidases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43190; Mature: 43190
Theoretical pI: Translated: 7.36; Mature: 7.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPSLYQSICLILCSQNLSGINLSGISPSSISLGPSTLFRHTRLSQRLAKFQIPRPIKHQ CCHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHC SQRFSIFALACFVAATLSGCANSLETCARTELKLTWAEPAELQATVTILSSDEFEGRKTQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCEEEEEEEECCCCCCCCCC TQGAAKSRDYIKQQFESLNLQPWGADFIVPFEYQTFFTQETGANVVATAMATEPTNRWRI CCCCHHHHHHHHHHHHHCCCCCCCCCEEEEECHHEEEECCCCCCEEEEEEECCCCCCEEE IVAHYDHLGMSGSKIYHGADDNASGVAAMLAIAKHWQQQFALQPNTLPKVNLMFVATDAE EEEEECCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCC EPGLYGSIALVEQLKTRLPEATFELMINLDMVSHPGRPYGIYLEGSRNFTQFNQFKSLLN CCCCCHHHHHHHHHHHHCCCCEEEEEEEEEHHCCCCCCEEEEEECCCCHHHHHHHHHHHC QQNRLCIKLTHPKPVGRSIQSTDWLRASDHYPFHKANIPWLYFGVPTHPQYHTPEDTVAT CCCCEEEEEECCCCCCCCCCCCCCEECCCCCCEECCCCCEEEEECCCCCCCCCCCCCEEE IDITFLAAVTESAFELLQLNAEYLKN EEHHHHHHHHHHHHHHHHCCHHHHCC >Mature Secondary Structure MLPSLYQSICLILCSQNLSGINLSGISPSSISLGPSTLFRHTRLSQRLAKFQIPRPIKHQ CCHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHC SQRFSIFALACFVAATLSGCANSLETCARTELKLTWAEPAELQATVTILSSDEFEGRKTQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCEEEEEEEECCCCCCCCCC TQGAAKSRDYIKQQFESLNLQPWGADFIVPFEYQTFFTQETGANVVATAMATEPTNRWRI CCCCHHHHHHHHHHHHHCCCCCCCCCEEEEECHHEEEECCCCCCEEEEEEECCCCCCEEE IVAHYDHLGMSGSKIYHGADDNASGVAAMLAIAKHWQQQFALQPNTLPKVNLMFVATDAE EEEEECCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCC EPGLYGSIALVEQLKTRLPEATFELMINLDMVSHPGRPYGIYLEGSRNFTQFNQFKSLLN CCCCCHHHHHHHHHHHHCCCCEEEEEEEEEHHCCCCCCEEEEEECCCCHHHHHHHHHHHC QQNRLCIKLTHPKPVGRSIQSTDWLRASDHYPFHKANIPWLYFGVPTHPQYHTPEDTVAT CCCCEEEEEECCCCCCCCCCCCCCEECCCCCCEECCCCCEEEEECCCCCCCCCCCCCEEE IDITFLAAVTESAFELLQLNAEYLKN EEHHHHHHHHHHHHHHHHCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA