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The map label for this gene is 126175932

Identifier: 126175932

GI number: 126175932

Start: 4381447

End: 4382352

Strand: Reverse

Name: 126175932

Synonym: Sbal_3738

Alternate gene names: NA

Gene position: 4382352-4381447 (Counterclockwise)

Preceding gene: 126175933

Following gene: 126175930

Centisome position: 85.47

GC content: 43.71

Gene sequence:

>906_bases
TTGAATTTTATTCGAAATAAAAATAAGCGTTTCGGCTTTGTGGCTTGGGTATTTGTGAGTTTAGCGATCGCCTTCGGTGG
CCATCAAGTCGAGGTTGAGCCTTTTGCCAATCATAAGGTCTCACTAGGTTTGGATTGGTTTATTTTAGACTTATTAGGCT
CAACGTTAATTTTCATTTTTATCGAGAAATGGTTACCCCATAAACCAGAACAGGCAATATTGAGACCCGAGTGGCAAGGG
GATTTAAATCATTTTCTGGTGAATCATTTAGCGATTGGATTTGTATTATTGGTGGCAAACCAATTTGTGCAGTCGAGCTT
TTCTTGGGCCATTTCCAGCACAGTGCAAAGCTTTATCGCGGGGCTTCCCTTTGTGTTGCAACTGCTGTTGATCCTATTGG
TCGCCGATTTAATGCAATATGCGGCGCATCGCGCTTATCATGAAATTCCTTTCCTGTGGCGCTTCCATTCAGTGCACCAT
AGCGCCAAGCATTTAGATTGGTTAGCGGGATCTCGGCAACATATGTTTGAGTTGATCGCTACCCGTTGTTTGGTGCTCAC
GCCGATTTTTATCTTGGGATTCTCTAAAGACATTATCAGTATTTATGTGATTATCGTTGGCGTGCAGGCGGTATTTAACC
ATGCCAATGTCCAAGTTAACTTCGGTTGGCTACGTTACTTAATCGTCAGCCCGCAGTTCCACCATTGGCACCATGCTTCC
GATAAGGCGGCTATAGATCGTAACTATGCTGCCCATTTTTCATTTTTAGATTACCTCTTTGGAACCGCAGTTCGAGGTCA
GAAAGAGTGGCCTGAGCAATATGGTGTCGTTGGCGATTACATGCCTGTTGGCATGTTTAAGCAGCAATTGTATCCCCTTG
GGTTAGCGAAGAAAGACACAAAATAG

Upstream 100 bases:

>100_bases
CCCAAAAAGTGTTTGAAGTTTAAGCAGCCTGCGGTGGTATTTCACCAATTAGCTGCTTAATTGTCGAGTGTCGCACTTCG
GAGTTGAATTCGGGGGTTTG

Downstream 100 bases:

>100_bases
CAGCGCTGTATTTGAAGTGACTTCTTTTAAAAGATGGGTTTGAAGTGACAGTTCGCAAGTGACTCTTCGCAAGTCGCAAG
TCGCAAGTCATAAGTCATAA

Product: putative transmembrane protein

Products: NA

Alternate protein names: Sterol Desaturase; Sterol Desaturase-Like Protein; Transmembrane Protein; Sterol Desaturase-Related Protein; Sterol Desaturase Family Protein; C-5 Sterol Desaturase; TRAP Dicarboxylate Transporter; Sterol Desaturase Protein; Sterol Desaturase -Like Protein; Transmembrane Fatty Acid Synthesis Protein; Fatty Acid Hydroxylase Superfamily; Sterol Desaturase-Like; Sterol Desaturate; TRAP Dicarboxylate Transporter DctM Subunit; Fatty Acid Hydroxylase Superfamily Protein; TRAP Dicarboxylate Transporter Subunit DctM; Sterol Desaturase Transmembrane Protein

Number of amino acids: Translated: 301; Mature: 301

Protein sequence:

>301_residues
MNFIRNKNKRFGFVAWVFVSLAIAFGGHQVEVEPFANHKVSLGLDWFILDLLGSTLIFIFIEKWLPHKPEQAILRPEWQG
DLNHFLVNHLAIGFVLLVANQFVQSSFSWAISSTVQSFIAGLPFVLQLLLILLVADLMQYAAHRAYHEIPFLWRFHSVHH
SAKHLDWLAGSRQHMFELIATRCLVLTPIFILGFSKDIISIYVIIVGVQAVFNHANVQVNFGWLRYLIVSPQFHHWHHAS
DKAAIDRNYAAHFSFLDYLFGTAVRGQKEWPEQYGVVGDYMPVGMFKQQLYPLGLAKKDTK

Sequences:

>Translated_301_residues
MNFIRNKNKRFGFVAWVFVSLAIAFGGHQVEVEPFANHKVSLGLDWFILDLLGSTLIFIFIEKWLPHKPEQAILRPEWQG
DLNHFLVNHLAIGFVLLVANQFVQSSFSWAISSTVQSFIAGLPFVLQLLLILLVADLMQYAAHRAYHEIPFLWRFHSVHH
SAKHLDWLAGSRQHMFELIATRCLVLTPIFILGFSKDIISIYVIIVGVQAVFNHANVQVNFGWLRYLIVSPQFHHWHHAS
DKAAIDRNYAAHFSFLDYLFGTAVRGQKEWPEQYGVVGDYMPVGMFKQQLYPLGLAKKDTK
>Mature_301_residues
MNFIRNKNKRFGFVAWVFVSLAIAFGGHQVEVEPFANHKVSLGLDWFILDLLGSTLIFIFIEKWLPHKPEQAILRPEWQG
DLNHFLVNHLAIGFVLLVANQFVQSSFSWAISSTVQSFIAGLPFVLQLLLILLVADLMQYAAHRAYHEIPFLWRFHSVHH
SAKHLDWLAGSRQHMFELIATRCLVLTPIFILGFSKDIISIYVIIVGVQAVFNHANVQVNFGWLRYLIVSPQFHHWHHAS
DKAAIDRNYAAHFSFLDYLFGTAVRGQKEWPEQYGVVGDYMPVGMFKQQLYPLGLAKKDTK

Specific function: Unknown

COG id: COG3000

COG function: function code I; Sterol desaturase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34612; Mature: 34612

Theoretical pI: Translated: 9.22; Mature: 9.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFIRNKNKRFGFVAWVFVSLAIAFGGHQVEVEPFANHKVSLGLDWFILDLLGSTLIFIF
CCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCEEECCHHHHHHHHHHHHHHHHH
IEKWLPHKPEQAILRPEWQGDLNHFLVNHLAIGFVLLVANQFVQSSFSWAISSTVQSFIA
HHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GLPFVLQLLLILLVADLMQYAAHRAYHEIPFLWRFHSVHHSAKHLDWLAGSRQHMFELIA
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
TRCLVLTPIFILGFSKDIISIYVIIVGVQAVFNHANVQVNFGWLRYLIVSPQFHHWHHAS
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEHHHHEEEEECCCCCCCCCCC
DKAAIDRNYAAHFSFLDYLFGTAVRGQKEWPEQYGVVGDYMPVGMFKQQLYPLGLAKKDT
CCHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCHHHHHHHHHCCCCCCCCC
K
C
>Mature Secondary Structure
MNFIRNKNKRFGFVAWVFVSLAIAFGGHQVEVEPFANHKVSLGLDWFILDLLGSTLIFIF
CCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCEEECCHHHHHHHHHHHHHHHHH
IEKWLPHKPEQAILRPEWQGDLNHFLVNHLAIGFVLLVANQFVQSSFSWAISSTVQSFIA
HHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GLPFVLQLLLILLVADLMQYAAHRAYHEIPFLWRFHSVHHSAKHLDWLAGSRQHMFELIA
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
TRCLVLTPIFILGFSKDIISIYVIIVGVQAVFNHANVQVNFGWLRYLIVSPQFHHWHHAS
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEHHHHEEEEECCCCCCCCCCC
DKAAIDRNYAAHFSFLDYLFGTAVRGQKEWPEQYGVVGDYMPVGMFKQQLYPLGLAKKDT
CCHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCHHHHHHHHHCCCCCCCCC
K
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA