| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is yhcG [H]
Identifier: 126175912
GI number: 126175912
Start: 4347122
End: 4348204
Strand: Reverse
Name: yhcG [H]
Synonym: Sbal_3718
Alternate gene names: 126175912
Gene position: 4348204-4347122 (Counterclockwise)
Preceding gene: 126175913
Following gene: 126175911
Centisome position: 84.8
GC content: 43.86
Gene sequence:
>1083_bases ATGAATAAGCCTAAAGTGCCGCCAACAATAACTGAACAACCTGATGAACAAACCTTTGCTTATCTATTAGCGCATATTCA GCAAACCCGACAGCAAGTTTTTGCACAGGTTAATACCGCACTGATCGAACTTTACTGGTCAGTAGGTAAAACCATTAGTG AAAAAGTCGTATCAGCAGGCTGGGGTAAAGGCGTGGTTAAGCAATTAGCCGCCTACCTTGCTAGCCAAGCACCCGACATT AAAGGTTTTAGCGATAAAAACCTCTGGCGCATGAAACAGTTTTATGAAACCTATCAACACGATATAAAGCTCGCATCATT GGTGAGAGTATTACCTTGGACTCATAACACCATTATCTTCTCTCGCTGTAAAAGTAACCGTGAGCGTGAACATTATTTAA TGCTGGTACAAAGAGAAAGGCTCAGTAGTCGCGAGTTGGAACGCCATATTAATGCCGCCCATTTTGAGCGCAGCCTCATT GAACAACCAAAACTCTCAGCAGTGCTGAGACAATCGCATCCAATTGCCAATACCATCTTTAAAGACAACTACACCTTAGA GTTTTTAGGTCTGCCCAGCAGCCACAGTGAAAGTGATCTGCAAAAAGCCATTATCAATAACCTCAAAACCTTCATATTAG AACTCGGTAAGGATTTTATCTTTATTGACGAAGAGTATCGCCTCCAAGTGGGCAACCAAGACTTTTATATTGACTTACTG TTCTTCCACCGCGGCCTCGCAGCATTGGTGGCCTTTGAGCTAAAAATTGGTAAATTTAGCCCACAGCATCTTGGGCAACT CGACTTTTACCTCGAAGCGCTAGACCGCGATGTAAAAAAGCCCCACGAAAACCCCAGTATTGGCGTATTACTGTGCCGAG ACAAAGACGATGAAGTGGTCGAATATGCGCTATCGCGCAACTTATCACCCACCTTAGTCGCACAATACCAATGCCAAATG CCCGACAAACAACTGTTGCAAGCTAAACTGCACCAGTTATTACAAGACCTGCCTGCGCAAGACGAATTAGCGAGTCAGCA CATGACTGAACAAATGCCAAGGCAAGGAGAATACAATGAATAA
Upstream 100 bases:
>100_bases TGGAAAGCGCGTACCCAAAAAGAGCTCGCGTTAATGGAAGACTTAATCCCCTATTTACACAAGCTCGCCCAAGGGCGGGA AATTTCAGGGCTTGCAGCGT
Downstream 100 bases:
>100_bases GCTAGAGGAAAAAGGTTTAGTGCCAAAGTTGAGGTTTTCTGAGTTTAAGGATGCACCTGAATGGAGCCCCACCACTTTTG GCGCAACAGCTACCTTTATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 360; Mature: 360
Protein sequence:
>360_residues MNKPKVPPTITEQPDEQTFAYLLAHIQQTRQQVFAQVNTALIELYWSVGKTISEKVVSAGWGKGVVKQLAAYLASQAPDI KGFSDKNLWRMKQFYETYQHDIKLASLVRVLPWTHNTIIFSRCKSNREREHYLMLVQRERLSSRELERHINAAHFERSLI EQPKLSAVLRQSHPIANTIFKDNYTLEFLGLPSSHSESDLQKAIINNLKTFILELGKDFIFIDEEYRLQVGNQDFYIDLL FFHRGLAALVAFELKIGKFSPQHLGQLDFYLEALDRDVKKPHENPSIGVLLCRDKDDEVVEYALSRNLSPTLVAQYQCQM PDKQLLQAKLHQLLQDLPAQDELASQHMTEQMPRQGEYNE
Sequences:
>Translated_360_residues MNKPKVPPTITEQPDEQTFAYLLAHIQQTRQQVFAQVNTALIELYWSVGKTISEKVVSAGWGKGVVKQLAAYLASQAPDI KGFSDKNLWRMKQFYETYQHDIKLASLVRVLPWTHNTIIFSRCKSNREREHYLMLVQRERLSSRELERHINAAHFERSLI EQPKLSAVLRQSHPIANTIFKDNYTLEFLGLPSSHSESDLQKAIINNLKTFILELGKDFIFIDEEYRLQVGNQDFYIDLL FFHRGLAALVAFELKIGKFSPQHLGQLDFYLEALDRDVKKPHENPSIGVLLCRDKDDEVVEYALSRNLSPTLVAQYQCQM PDKQLLQAKLHQLLQDLPAQDELASQHMTEQMPRQGEYNE >Mature_360_residues MNKPKVPPTITEQPDEQTFAYLLAHIQQTRQQVFAQVNTALIELYWSVGKTISEKVVSAGWGKGVVKQLAAYLASQAPDI KGFSDKNLWRMKQFYETYQHDIKLASLVRVLPWTHNTIIFSRCKSNREREHYLMLVQRERLSSRELERHINAAHFERSLI EQPKLSAVLRQSHPIANTIFKDNYTLEFLGLPSSHSESDLQKAIINNLKTFILELGKDFIFIDEEYRLQVGNQDFYIDLL FFHRGLAALVAFELKIGKFSPQHLGQLDFYLEALDRDVKKPHENPSIGVLLCRDKDDEVVEYALSRNLSPTLVAQYQCQM PDKQLLQAKLHQLLQDLPAQDELASQHMTEQMPRQGEYNE
Specific function: Unknown
COG id: COG4804
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789614, Length=342, Percent_Identity=32.1637426900585, Blast_Score=157, Evalue=1e-39,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009362 [H]
Pfam domain/function: PF06250 DUF1016 [H]
EC number: NA
Molecular weight: Translated: 41695; Mature: 41695
Theoretical pI: Translated: 6.85; Mature: 6.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKPKVPPTITEQPDEQTFAYLLAHIQQTRQQVFAQVNTALIELYWSVGKTISEKVVSAG CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC WGKGVVKQLAAYLASQAPDIKGFSDKNLWRMKQFYETYQHDIKLASLVRVLPWTHNTIIF CCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH SRCKSNREREHYLMLVQRERLSSRELERHINAAHFERSLIEQPKLSAVLRQSHPIANTIF HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHC KDNYTLEFLGLPSSHSESDLQKAIINNLKTFILELGKDFIFIDEEYRLQVGNQDFYIDLL CCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCHHEEEECCCCEEEHHH FFHRGLAALVAFELKIGKFSPQHLGQLDFYLEALDRDVKKPHENPSIGVLLCRDKDDEVV HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHH EYALSRNLSPTLVAQYQCQMPDKQLLQAKLHQLLQDLPAQDELASQHMTEQMPRQGEYNE HHHHHCCCCCHHEEHEECCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MNKPKVPPTITEQPDEQTFAYLLAHIQQTRQQVFAQVNTALIELYWSVGKTISEKVVSAG CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC WGKGVVKQLAAYLASQAPDIKGFSDKNLWRMKQFYETYQHDIKLASLVRVLPWTHNTIIF CCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH SRCKSNREREHYLMLVQRERLSSRELERHINAAHFERSLIEQPKLSAVLRQSHPIANTIF HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHC KDNYTLEFLGLPSSHSESDLQKAIINNLKTFILELGKDFIFIDEEYRLQVGNQDFYIDLL CCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCHHEEEECCCCEEEHHH FFHRGLAALVAFELKIGKFSPQHLGQLDFYLEALDRDVKKPHENPSIGVLLCRDKDDEVV HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHH EYALSRNLSPTLVAQYQCQMPDKQLLQAKLHQLLQDLPAQDELASQHMTEQMPRQGEYNE HHHHHCCCCCHHEEHEECCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]