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The map label for this gene is prrC [H]

Identifier: 126175910

GI number: 126175910

Start: 4344644

End: 4345849

Strand: Reverse

Name: prrC [H]

Synonym: Sbal_3716

Alternate gene names: 126175910

Gene position: 4345849-4344644 (Counterclockwise)

Preceding gene: 126175911

Following gene: 126175909

Centisome position: 84.76

GC content: 37.81

Gene sequence:

>1206_bases
ATGAGCGAATTAACCTTTGCTTCACTCGATGGCGTGGCGGCACATTTACGCCATGTGTTAGAAAACGGCATACCACAACC
CCAGAACAAGTTAAAACATATCAAACAAACTTTAGTTTTTGCCTATAATGGAACAGGTAAAACTCGCTTGTCGATGGCCT
TTAAAGAGCTAGGTAAAAAAGAGGGTAAGCGCGATACATTGTATTTTAATGCTTTTACAGAAGATTTGTTTAGTTGGGAT
AACGACCTTGAAGAGAATGCAACTCGAGTTTTGAAGCTCAATAAAACGTCCAGTTTTTTTGATGCTCTGAAAGATGAAGA
CCTTGATTTAGAAAATCAAATTAGGCCACTGGTGCAGCGTTACGGTGATTTTAATTTTTTGATTGACTACGAAAAAGGGC
ATGTGAATTTTATCCGCGAAGTATTAGTTGATGATAGAGCAGAAAATATTGAACATATCAAAGTGTCGCGAGGTGAAGAG
AACATTTTTATCTGGTGCTTTTTCCTCGCCATAGCCCAATTAGCGGCAGATAAACAAGTGACTTACAACTGGGTAGAGTA
TTTATATATTGATGACCCCATCTCATCACTCGATGACAATAACGCTATTGCGGTAGCAAGCCATCTTGCTCAGCTGCTGA
AAAACAACACTATTAAAGCGGTAATTTCATCCCATCACACTTTATTTTTTAATGTGATTTGGAATGAACTCAATGAAAAG
AAAAAGTTACAGCCGTATTTTTTAAGTTATGACAAGGAAGCGAAACTTTATAAACTGCGCTATACCAATAGTACACCATT
TTTTCACCATGTGGCACTGTTAGAGCAATTGCATAAAGCGGCTCAATCAGGTGATTTATTTACTTATCACTTTAATATTC
TGCGCAGTATTTTAGAAAAAACAGCTACTTTCCATGGTTTTAAAAACTTTTCTGCTTGTATTGCACAAGAAAAAGATGAT
CCTGAAGGAGTACTGCATGCGCGGATTATTAATATTTTAAGCCATGGCAATTATTCGTTATTTGAGCCGATGGAAATGAC
CGATGAAAATAAAGGGCATTTTCGCCGCATATTAAGCGATTTTATGAACAACTACCGCTTTGATCCTGCGCTGTTTCCAA
AGCCGTTACTGCATCAAGATCCTTCTGCACACCAAGAACCAGCAGTACAACAAGTGCAAACCGAACAACTCCAAGAGATT
AATTAG

Upstream 100 bases:

>100_bases
ACAAGCAAGGCTTAATGCAGCAACTGTTTCCGACGGTTGGTGTTGATTGCATTGATGCAGAAGATAGAGCAACGCAAAAT
GCCGAAGTAGAGGTGAGCGC

Downstream 100 bases:

>100_bases
TATGACCCAAGAACAACTCAACGATTTAGGTAAAATCCTGTGGGATATCGCCGACAGTTTACGTGGTGCAATGAATGCCG
ATGACTTTCGCGACTATATG

Product: anticodon nuclease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 401; Mature: 400

Protein sequence:

>401_residues
MSELTFASLDGVAAHLRHVLENGIPQPQNKLKHIKQTLVFAYNGTGKTRLSMAFKELGKKEGKRDTLYFNAFTEDLFSWD
NDLEENATRVLKLNKTSSFFDALKDEDLDLENQIRPLVQRYGDFNFLIDYEKGHVNFIREVLVDDRAENIEHIKVSRGEE
NIFIWCFFLAIAQLAADKQVTYNWVEYLYIDDPISSLDDNNAIAVASHLAQLLKNNTIKAVISSHHTLFFNVIWNELNEK
KKLQPYFLSYDKEAKLYKLRYTNSTPFFHHVALLEQLHKAAQSGDLFTYHFNILRSILEKTATFHGFKNFSACIAQEKDD
PEGVLHARIINILSHGNYSLFEPMEMTDENKGHFRRILSDFMNNYRFDPALFPKPLLHQDPSAHQEPAVQQVQTEQLQEI
N

Sequences:

>Translated_401_residues
MSELTFASLDGVAAHLRHVLENGIPQPQNKLKHIKQTLVFAYNGTGKTRLSMAFKELGKKEGKRDTLYFNAFTEDLFSWD
NDLEENATRVLKLNKTSSFFDALKDEDLDLENQIRPLVQRYGDFNFLIDYEKGHVNFIREVLVDDRAENIEHIKVSRGEE
NIFIWCFFLAIAQLAADKQVTYNWVEYLYIDDPISSLDDNNAIAVASHLAQLLKNNTIKAVISSHHTLFFNVIWNELNEK
KKLQPYFLSYDKEAKLYKLRYTNSTPFFHHVALLEQLHKAAQSGDLFTYHFNILRSILEKTATFHGFKNFSACIAQEKDD
PEGVLHARIINILSHGNYSLFEPMEMTDENKGHFRRILSDFMNNYRFDPALFPKPLLHQDPSAHQEPAVQQVQTEQLQEI
N
>Mature_400_residues
SELTFASLDGVAAHLRHVLENGIPQPQNKLKHIKQTLVFAYNGTGKTRLSMAFKELGKKEGKRDTLYFNAFTEDLFSWDN
DLEENATRVLKLNKTSSFFDALKDEDLDLENQIRPLVQRYGDFNFLIDYEKGHVNFIREVLVDDRAENIEHIKVSRGEEN
IFIWCFFLAIAQLAADKQVTYNWVEYLYIDDPISSLDDNNAIAVASHLAQLLKNNTIKAVISSHHTLFFNVIWNELNEKK
KLQPYFLSYDKEAKLYKLRYTNSTPFFHHVALLEQLHKAAQSGDLFTYHFNILRSILEKTATFHGFKNFSACIAQEKDDP
EGVLHARIINILSHGNYSLFEPMEMTDENKGHFRRILSDFMNNYRFDPALFPKPLLHQDPSAHQEPAVQQVQTEQLQEIN

Specific function: Anticodon nuclease triggers the cleavage ligation of tRNA(Lys). It is activated by T4 stp protein [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46535; Mature: 46404

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSELTFASLDGVAAHLRHVLENGIPQPQNKLKHIKQTLVFAYNGTGKTRLSMAFKELGKK
CCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHH
EGKRDTLYFNAFTEDLFSWDNDLEENATRVLKLNKTSSFFDALKDEDLDLENQIRPLVQR
CCCCCEEEEEHHHHHHHHCCCCHHHCHHEEEEECCCHHHHHHHCCCCCCHHHHHHHHHHH
YGDFNFLIDYEKGHVNFIREVLVDDRAENIEHIKVSRGEENIFIWCFFLAIAQLAADKQV
CCCCEEEEEECCCHHHHHHHHHHCCCCCCCCEEEEECCCCCEEHHHHHHHHHHHHCCCCC
TYNWVEYLYIDDPISSLDDNNAIAVASHLAQLLKNNTIKAVISSHHTLFFNVIWNELNEK
EEEEEEEEEECCCHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHCCCCEEHHHHHHHHHHH
KKLQPYFLSYDKEAKLYKLRYTNSTPFFHHVALLEQLHKAAQSGDLFTYHFNILRSILEK
HCCCCHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHH
TATFHGFKNFSACIAQEKDDPEGVLHARIINILSHGNYSLFEPMEMTDENKGHFRRILSD
HHHHHCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHCCCCHHHHHHHHHH
FMNNYRFDPALFPKPLLHQDPSAHQEPAVQQVQTEQLQEIN
HHHCCCCCCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SELTFASLDGVAAHLRHVLENGIPQPQNKLKHIKQTLVFAYNGTGKTRLSMAFKELGKK
CCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHH
EGKRDTLYFNAFTEDLFSWDNDLEENATRVLKLNKTSSFFDALKDEDLDLENQIRPLVQR
CCCCCEEEEEHHHHHHHHCCCCHHHCHHEEEEECCCHHHHHHHCCCCCCHHHHHHHHHHH
YGDFNFLIDYEKGHVNFIREVLVDDRAENIEHIKVSRGEENIFIWCFFLAIAQLAADKQV
CCCCEEEEEECCCHHHHHHHHHHCCCCCCCCEEEEECCCCCEEHHHHHHHHHHHHCCCCC
TYNWVEYLYIDDPISSLDDNNAIAVASHLAQLLKNNTIKAVISSHHTLFFNVIWNELNEK
EEEEEEEEEECCCHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHCCCCEEHHHHHHHHHHH
KKLQPYFLSYDKEAKLYKLRYTNSTPFFHHVALLEQLHKAAQSGDLFTYHFNILRSILEK
HCCCCHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHH
TATFHGFKNFSACIAQEKDDPEGVLHARIINILSHGNYSLFEPMEMTDENKGHFRRILSD
HHHHHCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHCCCCHHHHHHHHHH
FMNNYRFDPALFPKPLLHQDPSAHQEPAVQQVQTEQLQEIN
HHHCCCCCCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1691706 [H]