| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126175893
Identifier: 126175893
GI number: 126175893
Start: 4320783
End: 4321079
Strand: Reverse
Name: 126175893
Synonym: Sbal_3699
Alternate gene names: NA
Gene position: 4321079-4320783 (Counterclockwise)
Preceding gene: 126175894
Following gene: 126175892
Centisome position: 84.27
GC content: 47.81
Gene sequence:
>297_bases ATGCCAAGACCCAAAAAATGCCGTCAATTATCGAGCTGTGCACCCTGTAGCCTATTTAAGCCCAATGGGATCCCTGCGGT TGAATTAACTCATATTCAATTAGAGGCCGATGAGTTTGAGGCCCTCGAATTGGGTGATGTTAAAAGATTAAGCCAGATCG AAGCCGCGGCCTTGATGGGGATCTCTCGGCAAACCTTTGGATACCTTCTCGCCAATGCCCGTAAAAAGGTGGCGACGGCT ATAACTCAAGGTCAAGCCTTGAGGTTGCCAACCCCAAAAGACAAGGATTTATCATGA
Upstream 100 bases:
>100_bases CCCGAGTTTCACTTTTTGTGCACAAGACGTGCACCAAGAGCTAAAAGATGATTTCAATAGATAAAGACTATTTAAAAAAC TATTTAAAGATATAAAAATT
Downstream 100 bases:
>100_bases TTATTGCCATGCCGATGAGCCGCGAACGACTTGCCATTCACTTTACTAAAGCCGTGAAAATTGGTTTTTATAACGAACAT TTTCAGCTAATTAAGCTGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 98; Mature: 97
Protein sequence:
>98_residues MPRPKKCRQLSSCAPCSLFKPNGIPAVELTHIQLEADEFEALELGDVKRLSQIEAAALMGISRQTFGYLLANARKKVATA ITQGQALRLPTPKDKDLS
Sequences:
>Translated_98_residues MPRPKKCRQLSSCAPCSLFKPNGIPAVELTHIQLEADEFEALELGDVKRLSQIEAAALMGISRQTFGYLLANARKKVATA ITQGQALRLPTPKDKDLS >Mature_97_residues PRPKKCRQLSSCAPCSLFKPNGIPAVELTHIQLEADEFEALELGDVKRLSQIEAAALMGISRQTFGYLLANARKKVATAI TQGQALRLPTPKDKDLS
Specific function: Unknown
COG id: COG1342
COG function: function code R; Predicted DNA-binding proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0251 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y3699_SHEB5 (A3D8W0)
Other databases:
- EMBL: CP000563 - RefSeq: YP_001052042.1 - STRING: A3D8W0 - GeneID: 4841739 - GenomeReviews: CP000563_GR - KEGG: sbl:Sbal_3699 - NMPDR: fig|325240.3.peg.1106 - eggNOG: COG1342 - HOGENOM: HBG513201 - OMA: QTFGYLL - ProtClustDB: CLSK905901 - HAMAP: MF_00674 - InterPro: IPR002852
Pfam domain/function: PF02001 DUF134
EC number: NA
Molecular weight: Translated: 10707; Mature: 10575
Theoretical pI: Translated: 9.40; Mature: 9.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRPKKCRQLSSCAPCSLFKPNGIPAVELTHIQLEADEFEALELGDVKRLSQIEAAALMG CCCCHHHHHHHCCCCCCCCCCCCCCEEEEEEEEEECCCCCEECCCCHHHHHHHHHHHHHC ISRQTFGYLLANARKKVATAITQGQALRLPTPKDKDLS CCHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCC >Mature Secondary Structure PRPKKCRQLSSCAPCSLFKPNGIPAVELTHIQLEADEFEALELGDVKRLSQIEAAALMG CCCHHHHHHHCCCCCCCCCCCCCCEEEEEEEEEECCCCCEECCCCHHHHHHHHHHHHHC ISRQTFGYLLANARKKVATAITQGQALRLPTPKDKDLS CCHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA