Definition Shewanella baltica OS155 chromosome, complete genome.
Accession NC_009052
Length 5,127,376

Click here to switch to the map view.

The map label for this gene is 126175893

Identifier: 126175893

GI number: 126175893

Start: 4320783

End: 4321079

Strand: Reverse

Name: 126175893

Synonym: Sbal_3699

Alternate gene names: NA

Gene position: 4321079-4320783 (Counterclockwise)

Preceding gene: 126175894

Following gene: 126175892

Centisome position: 84.27

GC content: 47.81

Gene sequence:

>297_bases
ATGCCAAGACCCAAAAAATGCCGTCAATTATCGAGCTGTGCACCCTGTAGCCTATTTAAGCCCAATGGGATCCCTGCGGT
TGAATTAACTCATATTCAATTAGAGGCCGATGAGTTTGAGGCCCTCGAATTGGGTGATGTTAAAAGATTAAGCCAGATCG
AAGCCGCGGCCTTGATGGGGATCTCTCGGCAAACCTTTGGATACCTTCTCGCCAATGCCCGTAAAAAGGTGGCGACGGCT
ATAACTCAAGGTCAAGCCTTGAGGTTGCCAACCCCAAAAGACAAGGATTTATCATGA

Upstream 100 bases:

>100_bases
CCCGAGTTTCACTTTTTGTGCACAAGACGTGCACCAAGAGCTAAAAGATGATTTCAATAGATAAAGACTATTTAAAAAAC
TATTTAAAGATATAAAAATT

Downstream 100 bases:

>100_bases
TTATTGCCATGCCGATGAGCCGCGAACGACTTGCCATTCACTTTACTAAAGCCGTGAAAATTGGTTTTTATAACGAACAT
TTTCAGCTAATTAAGCTGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 98; Mature: 97

Protein sequence:

>98_residues
MPRPKKCRQLSSCAPCSLFKPNGIPAVELTHIQLEADEFEALELGDVKRLSQIEAAALMGISRQTFGYLLANARKKVATA
ITQGQALRLPTPKDKDLS

Sequences:

>Translated_98_residues
MPRPKKCRQLSSCAPCSLFKPNGIPAVELTHIQLEADEFEALELGDVKRLSQIEAAALMGISRQTFGYLLANARKKVATA
ITQGQALRLPTPKDKDLS
>Mature_97_residues
PRPKKCRQLSSCAPCSLFKPNGIPAVELTHIQLEADEFEALELGDVKRLSQIEAAALMGISRQTFGYLLANARKKVATAI
TQGQALRLPTPKDKDLS

Specific function: Unknown

COG id: COG1342

COG function: function code R; Predicted DNA-binding proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0251 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y3699_SHEB5 (A3D8W0)

Other databases:

- EMBL:   CP000563
- RefSeq:   YP_001052042.1
- STRING:   A3D8W0
- GeneID:   4841739
- GenomeReviews:   CP000563_GR
- KEGG:   sbl:Sbal_3699
- NMPDR:   fig|325240.3.peg.1106
- eggNOG:   COG1342
- HOGENOM:   HBG513201
- OMA:   QTFGYLL
- ProtClustDB:   CLSK905901
- HAMAP:   MF_00674
- InterPro:   IPR002852

Pfam domain/function: PF02001 DUF134

EC number: NA

Molecular weight: Translated: 10707; Mature: 10575

Theoretical pI: Translated: 9.40; Mature: 9.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRPKKCRQLSSCAPCSLFKPNGIPAVELTHIQLEADEFEALELGDVKRLSQIEAAALMG
CCCCHHHHHHHCCCCCCCCCCCCCCEEEEEEEEEECCCCCEECCCCHHHHHHHHHHHHHC
ISRQTFGYLLANARKKVATAITQGQALRLPTPKDKDLS
CCHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCC
>Mature Secondary Structure 
PRPKKCRQLSSCAPCSLFKPNGIPAVELTHIQLEADEFEALELGDVKRLSQIEAAALMG
CCCHHHHHHHCCCCCCCCCCCCCCEEEEEEEEEECCCCCEECCCCHHHHHHHHHHHHHC
ISRQTFGYLLANARKKVATAITQGQALRLPTPKDKDLS
CCHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA