| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is phoA [H]
Identifier: 126175886
GI number: 126175886
Start: 4311200
End: 4312837
Strand: Reverse
Name: phoA [H]
Synonym: Sbal_3691
Alternate gene names: 126175886
Gene position: 4312837-4311200 (Counterclockwise)
Preceding gene: 126175887
Following gene: 126175885
Centisome position: 84.11
GC content: 50.92
Gene sequence:
>1638_bases ATGAATAAGAAATTACTAGTAGTCGCGATTTCAGCCATGCTGGGTTTAGCCGCATGCGGTAGCGATGGTGATAACGGTAC CGCGGGAACACCGGGTAGCAATGGATCAAATGGGTCTAACGGTAGCAATGGCAAAGATTGGACTGCTGTGAATCAGTGGT ATGTCGATGCACAAGCTCGCGTGACCAAAGCCGAAGGCTTAACGGTTAACAATGATGTTGGCGCCGCGAAAAACGTGATC CTGTTTGTGGGTGACGGTATGGGTGTATCGACCATTACTGCCGCACGTATTTTAGAAGGCCAGCTAAAAGGCAAAACGGG TGAAGAAAACTCGTTATCTTTCGAAACTCTGCCGTATGTGGGTCTTTCTAAAACCTATAACGTCGACGGCCAAACGCCCG ATTCTGCAGGCACTATGTCGGCGATGATGACAGGTGTAAAAACTGACGTGGGCGTGATTTCACAAGCTGAAGGCGTAGTA CGTGCTAACTGTGCTTCGACTAAAGATCAAAATCTTGTGACATCACTTGAGCTTGCCGCAATGGCGGGAATGGCAACGGG CGTGGTAACGACTGCGCGTTTAACCCACGCAACTCCTGCGGCGACTTACGCCCATGTGCCAGAACGTGATTGGGAAGCCG ATTCAAACCTACCTGCAGAAGCTGTGACTAACGGCTGTAAAGATATCGCCGCGCAAATGCTCGACTTTAACTACGGCAGC GGTCTTAACGTGATGATGGGTGGCGGTCGCCGCGCCTTTATTCCTAAGACGACCGTTGATCCAGAAGGTAAAGCCGGTAA GCGTAACGATGGTCGCGATCTCACTGCTGAGTGGATGAGCAAATACACTAACGCCGCTTACGTGCAAGACAGAGACGGTT TCCTCAGTGTGGATGCAGCAAGCACAGATCATTTGCTTGGCCTATTCAACTCATCGCACATGGAATACGACTACGACCGT AAAGAAGCTGGCGTGACTGGTGAGCCATCATTGGCGGAAATGACGGCTAAGTCGATTGATATTCTGAAGAAAAACTCAAA AGGCTTCGTGCTGATTGTTGAAGCAGGCCGTATCGACCATGCTCACCATGCGGGTAACGCAGCGCGTGCGCTGTATGACA CAGTGGCATTGTCTGAAGCGGTACGCGTGGCGATGGAAAAAACCTCGGCTAACGATACCTTGTTAATGGTTACAGCGGAT CACAGCCATGTGTTCACCATCGCAGGTTATCCAACTCGCGGTAACCCTATCCTAGGTCTAGTGAAGTCGAACGACGCCAA CGGCGTTGCTGAAGTGACTAACTCTACCGATGCTAACGGTTTGCCATATACCACAGTCGGTTACGCTAACGGCATGGGCT ATGCGTCATTAGCAACAGGTGGCGATGAGCGTTACAACTTCCCAGTGGACGCAGGCCGTAAGGACTTGAACTTTGTTGAT ACCCAAAGTGCCGGATTCCACCAAGAAGCCCTAGTGCCATTAAGCGATGAGACCCATGCTGGGGAAGACGTAGCGATTTT CGCCCGCGGTCCAAGTTCGGATCTTATCCAAGGTACGGTTGAGCAGAACCACATTTTCCACGTGATGAACCGCGCGGCAA ATTTAGTGGTTAAAGCTGAAGCGGCTGCCGTTAAGTAA
Upstream 100 bases:
>100_bases CAGAACGTGATCTTCCACATTATCAACCAAGCGCAGCAGCTTGGCGGCACTAAGTACTAATCACGTATTAGTTACTGAGT CCTCACTTTTGGAGCAAAAA
Downstream 100 bases:
>100_bases GACCCGCTTAGTCTCTGCATAAGTGAAGTCAGAAATAGTGCACTAAGAAATAGTGCACTAAGACATAGTGCAGTAGTAGC TAAGTAAAAGCAGTGCCGAT
Product: alkaline phosphatase
Products: NA
Alternate protein names: APase [H]
Number of amino acids: Translated: 545; Mature: 545
Protein sequence:
>545_residues MNKKLLVVAISAMLGLAACGSDGDNGTAGTPGSNGSNGSNGSNGKDWTAVNQWYVDAQARVTKAEGLTVNNDVGAAKNVI LFVGDGMGVSTITAARILEGQLKGKTGEENSLSFETLPYVGLSKTYNVDGQTPDSAGTMSAMMTGVKTDVGVISQAEGVV RANCASTKDQNLVTSLELAAMAGMATGVVTTARLTHATPAATYAHVPERDWEADSNLPAEAVTNGCKDIAAQMLDFNYGS GLNVMMGGGRRAFIPKTTVDPEGKAGKRNDGRDLTAEWMSKYTNAAYVQDRDGFLSVDAASTDHLLGLFNSSHMEYDYDR KEAGVTGEPSLAEMTAKSIDILKKNSKGFVLIVEAGRIDHAHHAGNAARALYDTVALSEAVRVAMEKTSANDTLLMVTAD HSHVFTIAGYPTRGNPILGLVKSNDANGVAEVTNSTDANGLPYTTVGYANGMGYASLATGGDERYNFPVDAGRKDLNFVD TQSAGFHQEALVPLSDETHAGEDVAIFARGPSSDLIQGTVEQNHIFHVMNRAANLVVKAEAAAVK
Sequences:
>Translated_545_residues MNKKLLVVAISAMLGLAACGSDGDNGTAGTPGSNGSNGSNGSNGKDWTAVNQWYVDAQARVTKAEGLTVNNDVGAAKNVI LFVGDGMGVSTITAARILEGQLKGKTGEENSLSFETLPYVGLSKTYNVDGQTPDSAGTMSAMMTGVKTDVGVISQAEGVV RANCASTKDQNLVTSLELAAMAGMATGVVTTARLTHATPAATYAHVPERDWEADSNLPAEAVTNGCKDIAAQMLDFNYGS GLNVMMGGGRRAFIPKTTVDPEGKAGKRNDGRDLTAEWMSKYTNAAYVQDRDGFLSVDAASTDHLLGLFNSSHMEYDYDR KEAGVTGEPSLAEMTAKSIDILKKNSKGFVLIVEAGRIDHAHHAGNAARALYDTVALSEAVRVAMEKTSANDTLLMVTAD HSHVFTIAGYPTRGNPILGLVKSNDANGVAEVTNSTDANGLPYTTVGYANGMGYASLATGGDERYNFPVDAGRKDLNFVD TQSAGFHQEALVPLSDETHAGEDVAIFARGPSSDLIQGTVEQNHIFHVMNRAANLVVKAEAAAVK >Mature_545_residues MNKKLLVVAISAMLGLAACGSDGDNGTAGTPGSNGSNGSNGSNGKDWTAVNQWYVDAQARVTKAEGLTVNNDVGAAKNVI LFVGDGMGVSTITAARILEGQLKGKTGEENSLSFETLPYVGLSKTYNVDGQTPDSAGTMSAMMTGVKTDVGVISQAEGVV RANCASTKDQNLVTSLELAAMAGMATGVVTTARLTHATPAATYAHVPERDWEADSNLPAEAVTNGCKDIAAQMLDFNYGS GLNVMMGGGRRAFIPKTTVDPEGKAGKRNDGRDLTAEWMSKYTNAAYVQDRDGFLSVDAASTDHLLGLFNSSHMEYDYDR KEAGVTGEPSLAEMTAKSIDILKKNSKGFVLIVEAGRIDHAHHAGNAARALYDTVALSEAVRVAMEKTSANDTLLMVTAD HSHVFTIAGYPTRGNPILGLVKSNDANGVAEVTNSTDANGLPYTTVGYANGMGYASLATGGDERYNFPVDAGRKDLNFVD TQSAGFHQEALVPLSDETHAGEDVAIFARGPSSDLIQGTVEQNHIFHVMNRAANLVVKAEAAAVK
Specific function: Unknown
COG id: COG1785
COG function: function code P; Alkaline phosphatase
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the alkaline phosphatase family [H]
Homologues:
Organism=Homo sapiens, GI116734717, Length=491, Percent_Identity=42.7698574338086, Blast_Score=385, Evalue=1e-107, Organism=Homo sapiens, GI294660770, Length=463, Percent_Identity=43.4125269978402, Blast_Score=374, Evalue=1e-104, Organism=Homo sapiens, GI157266292, Length=467, Percent_Identity=43.254817987152, Blast_Score=369, Evalue=1e-102, Organism=Homo sapiens, GI157266296, Length=468, Percent_Identity=42.9487179487179, Blast_Score=367, Evalue=1e-101, Organism=Homo sapiens, GI94721246, Length=468, Percent_Identity=42.9487179487179, Blast_Score=366, Evalue=1e-101, Organism=Homo sapiens, GI294660772, Length=419, Percent_Identity=41.527446300716, Blast_Score=318, Evalue=1e-86, Organism=Escherichia coli, GI48994877, Length=381, Percent_Identity=34.1207349081365, Blast_Score=134, Evalue=2e-32, Organism=Saccharomyces cerevisiae, GI6320689, Length=344, Percent_Identity=32.5581395348837, Blast_Score=130, Evalue=6e-31, Organism=Drosophila melanogaster, GI21358067, Length=490, Percent_Identity=42.4489795918367, Blast_Score=348, Evalue=8e-96, Organism=Drosophila melanogaster, GI21355149, Length=553, Percent_Identity=39.9638336347197, Blast_Score=344, Evalue=9e-95, Organism=Drosophila melanogaster, GI85725200, Length=471, Percent_Identity=42.2505307855626, Blast_Score=336, Evalue=3e-92, Organism=Drosophila melanogaster, GI85815833, Length=471, Percent_Identity=42.2505307855626, Blast_Score=336, Evalue=3e-92, Organism=Drosophila melanogaster, GI19921912, Length=533, Percent_Identity=39.5872420262664, Blast_Score=335, Evalue=7e-92, Organism=Drosophila melanogaster, GI24651554, Length=491, Percent_Identity=40.9368635437882, Blast_Score=334, Evalue=9e-92, Organism=Drosophila melanogaster, GI21355151, Length=501, Percent_Identity=39.3213572854291, Blast_Score=324, Evalue=8e-89, Organism=Drosophila melanogaster, GI24585213, Length=498, Percent_Identity=39.1566265060241, Blast_Score=317, Evalue=1e-86, Organism=Drosophila melanogaster, GI24651556, Length=465, Percent_Identity=41.505376344086, Blast_Score=314, Evalue=9e-86, Organism=Drosophila melanogaster, GI21355981, Length=466, Percent_Identity=41.6309012875536, Blast_Score=314, Evalue=1e-85, Organism=Drosophila melanogaster, GI24657835, Length=484, Percent_Identity=39.2561983471074, Blast_Score=308, Evalue=6e-84, Organism=Drosophila melanogaster, GI24657842, Length=487, Percent_Identity=38.6036960985626, Blast_Score=308, Evalue=8e-84, Organism=Drosophila melanogaster, GI24657827, Length=475, Percent_Identity=39.3684210526316, Blast_Score=300, Evalue=1e-81, Organism=Drosophila melanogaster, GI18859923, Length=492, Percent_Identity=37.6016260162602, Blast_Score=278, Evalue=1e-74, Organism=Drosophila melanogaster, GI24645593, Length=328, Percent_Identity=29.2682926829268, Blast_Score=104, Evalue=2e-22,
Paralogues:
None
Copy number: 340 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017849 - InterPro: IPR001952 - InterPro: IPR018299 - InterPro: IPR017850 [H]
Pfam domain/function: PF00245 Alk_phosphatase [H]
EC number: =3.1.3.1 [H]
Molecular weight: Translated: 57102; Mature: 57102
Theoretical pI: Translated: 4.95; Mature: 4.95
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKKLLVVAISAMLGLAACGSDGDNGTAGTPGSNGSNGSNGSNGKDWTAVNQWYVDAQAR CCCCEEEEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCE VTKAEGLTVNNDVGAAKNVILFVGDGMGVSTITAARILEGQLKGKTGEENSLSFETLPYV EEECCCEEECCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCC GLSKTYNVDGQTPDSAGTMSAMMTGVKTDVGVISQAEGVVRANCASTKDQNLVTSLELAA CCCCEEECCCCCCCCCHHHHHHHHCCCCCCCHHHCCCCEEEECCCCCCCCHHHHHHHHHH MAGMATGVVTTARLTHATPAATYAHVPERDWEADSNLPAEAVTNGCKDIAAQMLDFNYGS HHHHHHHHEEEEHCCCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCC GLNVMMGGGRRAFIPKTTVDPEGKAGKRNDGRDLTAEWMSKYTNAAYVQDRDGFLSVDAA CCEEEECCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCEEEEECCCCEEEEECC STDHLLGLFNSSHMEYDYDRKEAGVTGEPSLAEMTAKSIDILKKNSKGFVLIVEAGRIDH CCCCEEEEECCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHEEECCCCEEEEEECCCCCC AHHAGNAARALYDTVALSEAVRVAMEKTSANDTLLMVTADHSHVFTIAGYPTRGNPILGL HHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCEEEEEECCCCCCCCEEEE VKSNDANGVAEVTNSTDANGLPYTTVGYANGMGYASLATGGDERYNFPVDAGRKDLNFVD EECCCCCCEEEECCCCCCCCCCEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEE TQSAGFHQEALVPLSDETHAGEDVAIFARGPSSDLIQGTVEQNHIFHVMNRAANLVVKAE CCCCCCCCCCEEECCCCCCCCCCEEEEEECCCCHHHCCCHHHHHHHHHHHHHCCEEEEEC AAAVK CCCCC >Mature Secondary Structure MNKKLLVVAISAMLGLAACGSDGDNGTAGTPGSNGSNGSNGSNGKDWTAVNQWYVDAQAR CCCCEEEEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCE VTKAEGLTVNNDVGAAKNVILFVGDGMGVSTITAARILEGQLKGKTGEENSLSFETLPYV EEECCCEEECCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCC GLSKTYNVDGQTPDSAGTMSAMMTGVKTDVGVISQAEGVVRANCASTKDQNLVTSLELAA CCCCEEECCCCCCCCCHHHHHHHHCCCCCCCHHHCCCCEEEECCCCCCCCHHHHHHHHHH MAGMATGVVTTARLTHATPAATYAHVPERDWEADSNLPAEAVTNGCKDIAAQMLDFNYGS HHHHHHHHEEEEHCCCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCC GLNVMMGGGRRAFIPKTTVDPEGKAGKRNDGRDLTAEWMSKYTNAAYVQDRDGFLSVDAA CCEEEECCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCEEEEECCCCEEEEECC STDHLLGLFNSSHMEYDYDRKEAGVTGEPSLAEMTAKSIDILKKNSKGFVLIVEAGRIDH CCCCEEEEECCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHEEECCCCEEEEEECCCCCC AHHAGNAARALYDTVALSEAVRVAMEKTSANDTLLMVTADHSHVFTIAGYPTRGNPILGL HHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCEEEEEECCCCCCCCEEEE VKSNDANGVAEVTNSTDANGLPYTTVGYANGMGYASLATGGDERYNFPVDAGRKDLNFVD EECCCCCCEEEECCCCCCCCCCEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEE TQSAGFHQEALVPLSDETHAGEDVAIFARGPSSDLIQGTVEQNHIFHVMNRAANLVVKAE CCCCCCCCCCEEECCCCCCCCCCEEEEEECCCCHHHCCCHHHHHHHHHHHHHCCEEEEEC AAAVK CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2129542 [H]