Click here to switch to the map view.

The map label for this gene is motX [H]

Identifier: 126175843

GI number: 126175843

Start: 4271344

End: 4272000

Strand: Reverse

Name: motX [H]

Synonym: Sbal_3648

Alternate gene names: 126175843

Gene position: 4272000-4271344 (Counterclockwise)

Preceding gene: 126175844

Following gene: 126175842

Centisome position: 83.32

GC content: 45.66

Gene sequence:

>657_bases
ATGCAAGTATTCACCCTATTGTCATTGAGAGTCGTTATGCTACGTACAGCACTAGTTGCGCTACTGCCCTTAGTATCTTC
AATGTGCTTTGCTGAAACGCAGGCGGTGGATATTTATAGCCAAGATCAATTGCTTGATTTGATCCGAAGTGATCAATATT
TAGCGAAAGTGAAGCGTGATGATTGCCAGTTAGTCCAAGACATTGAGGCGCGAGCCCAAGTCTTAAAACAGCCTTTATAT
CAATTCCTGTGGGGCGAAATGCTCAATTATGGAACCTGTGTAAAGGCAAATCCTGTGAAGGGTATTGCTTTGTTACGTGA
CTCGGCCGAACAAGGTAGCTCAGAAGCGATGTTAAAGCTTGCCGAGTATTATCAGAGTGGGAAATTTGTCATCCGCAATA
AAGACAGAGCAGTGCATTATTTACTGCCTGCGGCTGCAAGTGGTGATTTACCCGCTCGTATGATGTTAGTGCGTTTATTC
GGTGAGGGTTATGGTAGTCCTAGGGATTACGAGATGGCCTATCACTGGTTATATAACGATGTATTTGCGGACGAGGCGAC
GAAGAAAAAAGCCTTGTCTTTACTGCAGGTGTTAGCAGCTAAAATGCCCCCCAGTGCAGTGGCGCGAGCCCAGCAAGAAC
AGTTGCGAACCCGTTAA

Upstream 100 bases:

>100_bases
CCGTGTTTCACGGCCTTTTTCTCTGCTTCTTTATGCCTTTCTCTGTTTAATTCTGCGGTTAGAAATTCAGCTCAAGCTCA
AGAAATAGGTTATACTGCCG

Downstream 100 bases:

>100_bases
GTGGTCTCTTAATCTAGAGACACATTATTTGGATATTGAATGATCAAAGACCCTCATTTTGAGCGTGAACAGGATAAGTA
CGAAAACCCTATCCCAAGCC

Product: Sel1 domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 218; Mature: 218

Protein sequence:

>218_residues
MQVFTLLSLRVVMLRTALVALLPLVSSMCFAETQAVDIYSQDQLLDLIRSDQYLAKVKRDDCQLVQDIEARAQVLKQPLY
QFLWGEMLNYGTCVKANPVKGIALLRDSAEQGSSEAMLKLAEYYQSGKFVIRNKDRAVHYLLPAAASGDLPARMMLVRLF
GEGYGSPRDYEMAYHWLYNDVFADEATKKKALSLLQVLAAKMPPSAVARAQQEQLRTR

Sequences:

>Translated_218_residues
MQVFTLLSLRVVMLRTALVALLPLVSSMCFAETQAVDIYSQDQLLDLIRSDQYLAKVKRDDCQLVQDIEARAQVLKQPLY
QFLWGEMLNYGTCVKANPVKGIALLRDSAEQGSSEAMLKLAEYYQSGKFVIRNKDRAVHYLLPAAASGDLPARMMLVRLF
GEGYGSPRDYEMAYHWLYNDVFADEATKKKALSLLQVLAAKMPPSAVARAQQEQLRTR
>Mature_218_residues
MQVFTLLSLRVVMLRTALVALLPLVSSMCFAETQAVDIYSQDQLLDLIRSDQYLAKVKRDDCQLVQDIEARAQVLKQPLY
QFLWGEMLNYGTCVKANPVKGIALLRDSAEQGSSEAMLKLAEYYQSGKFVIRNKDRAVHYLLPAAASGDLPARMMLVRLF
GEGYGSPRDYEMAYHWLYNDVFADEATKKKALSLLQVLAAKMPPSAVARAQQEQLRTR

Specific function: The power to drive the polar flagellar rotary motor of V.parahaemolyticus is derived from the transmembrane potential of sodium ions. Force is generated by the motor on coupling of the movement of ions across the membrane to rotation of the flagellum. Mot

COG id: COG0790

COG function: function code R; FOG: TPR repeat, SEL1 subfamily

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 3 Sel1-like repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006597
- InterPro:   IPR011990 [H]

Pfam domain/function: PF08238 Sel1 [H]

EC number: NA

Molecular weight: Translated: 24601; Mature: 24601

Theoretical pI: Translated: 8.73; Mature: 8.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQVFTLLSLRVVMLRTALVALLPLVSSMCFAETQAVDIYSQDQLLDLIRSDQYLAKVKRD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHH
DCQLVQDIEARAQVLKQPLYQFLWGEMLNYGTCVKANPVKGIALLRDSAEQGSSEAMLKL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCHHCCHHHHHHHH
AEYYQSGKFVIRNKDRAVHYLLPAAASGDLPARMMLVRLFGEGYGSPRDYEMAYHWLYND
HHHHHCCCEEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
VFADEATKKKALSLLQVLAAKMPPSAVARAQQEQLRTR
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQVFTLLSLRVVMLRTALVALLPLVSSMCFAETQAVDIYSQDQLLDLIRSDQYLAKVKRD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHH
DCQLVQDIEARAQVLKQPLYQFLWGEMLNYGTCVKANPVKGIALLRDSAEQGSSEAMLKL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCHHCCHHHHHHHH
AEYYQSGKFVIRNKDRAVHYLLPAAASGDLPARMMLVRLFGEGYGSPRDYEMAYHWLYND
HHHHHCCCEEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
VFADEATKKKALSLLQVLAAKMPPSAVARAQQEQLRTR
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7928960; 12620739 [H]