| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is yqiA [H]
Identifier: 126175770
GI number: 126175770
Start: 4201952
End: 4202527
Strand: Reverse
Name: yqiA [H]
Synonym: Sbal_3574
Alternate gene names: 126175770
Gene position: 4202527-4201952 (Counterclockwise)
Preceding gene: 126175771
Following gene: 126175769
Centisome position: 81.96
GC content: 45.49
Gene sequence:
>576_bases ATGCTGCTTTATATTCACGGATTTAATAGCTCACCCTTTTCAGATAAAGCTGTGATAACGGCTAAGTACATGGCGCAGCA TCACCCTAGTGTGATCTTTCATCAGCCGCAATTGCCCAATACACCCAAGGCAGCCATGGCGCTGTTAACCACTTATGTTG AGGCGGCTATCGATGCCAAAGAGCCATTAGCTTACATAGGCTCATCGTTAGGCGGATATTTTGCCAGCTATTTAGCCGAA ACCTATGGCGGCAAAGCTGTGTTAGTCAATCCAGCGGTAAAACCCTTTGAATTGTTTGATGAGTTTATGGGGCCGCAATT TAATCCCTATACCGAACAGCATTATCTTGTCGTGCCCGAGCATAAGCGGGAAGTTGCTGAATTTAATACGGCTGTTATCC GCAATCCGGATCGTTTTTTGGTATTATTGCAGACGGGTGATGAAGTGCTGGATTATCGCGAAGCGGTCAATAAGTACCAT CACTGCCAATTGCGAATTGAAGCGGGAGGCGATCACAGTTTTGTTGGCTACGAATCGCATCTGCAAACTGTAAGCCAATT TTTACACTTACCTTGA
Upstream 100 bases:
>100_bases GTAGCATCAACACTAAAGTGTATCGCGTTCCGGGTAACCATTTTTCCCCCGACAACAACTCTAGCGGTTATTAACGCGAA TAACCGCAGCCTGAGGAAAT
Downstream 100 bases:
>100_bases CAAACAGACATGCCGAGCCGCAACATGGCCGGATATAACAACCTATAGCGTGCCCTATGACGAATCAATACACCTCTGAC GCCATTGAAGTTCTCAACGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 191; Mature: 191
Protein sequence:
>191_residues MLLYIHGFNSSPFSDKAVITAKYMAQHHPSVIFHQPQLPNTPKAAMALLTTYVEAAIDAKEPLAYIGSSLGGYFASYLAE TYGGKAVLVNPAVKPFELFDEFMGPQFNPYTEQHYLVVPEHKREVAEFNTAVIRNPDRFLVLLQTGDEVLDYREAVNKYH HCQLRIEAGGDHSFVGYESHLQTVSQFLHLP
Sequences:
>Translated_191_residues MLLYIHGFNSSPFSDKAVITAKYMAQHHPSVIFHQPQLPNTPKAAMALLTTYVEAAIDAKEPLAYIGSSLGGYFASYLAE TYGGKAVLVNPAVKPFELFDEFMGPQFNPYTEQHYLVVPEHKREVAEFNTAVIRNPDRFLVLLQTGDEVLDYREAVNKYH HCQLRIEAGGDHSFVGYESHLQTVSQFLHLP >Mature_191_residues MLLYIHGFNSSPFSDKAVITAKYMAQHHPSVIFHQPQLPNTPKAAMALLTTYVEAAIDAKEPLAYIGSSLGGYFASYLAE TYGGKAVLVNPAVKPFELFDEFMGPQFNPYTEQHYLVVPEHKREVAEFNTAVIRNPDRFLVLLQTGDEVLDYREAVNKYH HCQLRIEAGGDHSFVGYESHLQTVSQFLHLP
Specific function: Displays esterase activity toward palmitoyl-CoA and pNP- butyrate [H]
COG id: COG3150
COG function: function code R; Predicted esterase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789409, Length=189, Percent_Identity=43.3862433862434, Blast_Score=160, Evalue=4e-41,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008886 [H]
Pfam domain/function: PF05728 UPF0227 [H]
EC number: NA
Molecular weight: Translated: 21501; Mature: 21501
Theoretical pI: Translated: 6.27; Mature: 6.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLYIHGFNSSPFSDKAVITAKYMAQHHPSVIFHQPQLPNTPKAAMALLTTYVEAAIDAK CEEEEECCCCCCCCCCEEEHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCC EPLAYIGSSLGGYFASYLAETYGGKAVLVNPAVKPFELFDEFMGPQFNPYTEQHYLVVPE CHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHCCCCCCCCCCEEEEECH HKREVAEFNTAVIRNPDRFLVLLQTGDEVLDYREAVNKYHHCQLRIEAGGDHSFVGYESH HHHHHHHHHHHEEECCCCEEEEEECCCHHHHHHHHHCHHEEEEEEEEECCCCCCCCHHHH LQTVSQFLHLP HHHHHHHHCCC >Mature Secondary Structure MLLYIHGFNSSPFSDKAVITAKYMAQHHPSVIFHQPQLPNTPKAAMALLTTYVEAAIDAK CEEEEECCCCCCCCCCEEEHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCC EPLAYIGSSLGGYFASYLAETYGGKAVLVNPAVKPFELFDEFMGPQFNPYTEQHYLVVPE CHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHCCCCCCCCCCEEEEECH HKREVAEFNTAVIRNPDRFLVLLQTGDEVLDYREAVNKYHHCQLRIEAGGDHSFVGYESH HHHHHHHHHHHEEECCCCEEEEEECCCHHHHHHHHHCHHEEEEEEEEECCCCCCCCHHHH LQTVSQFLHLP HHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]