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The map label for this gene is ygdL [H]

Identifier: 126175764

GI number: 126175764

Start: 4192539

End: 4193348

Strand: Reverse

Name: ygdL [H]

Synonym: Sbal_3568

Alternate gene names: 126175764

Gene position: 4193348-4192539 (Counterclockwise)

Preceding gene: 126175767

Following gene: 126175762

Centisome position: 81.78

GC content: 47.04

Gene sequence:

>810_bases
ATGACTGAGGCCTATCTAAATCGATTTGGCGGAATTGGCCGTTTGTATGGACAAAAGGCTCTGGCTAAATTTGCCACATC
CCACGTGGTGGTGATTGGTATTGGTGGCGTAGGTACTTGGGCGGCAGAGGCCTTAGCGCGAAGCGGCATCGGACAGATAA
GCTTGATGGATTTAGACGATATCTGTGTCACTAACACTAACCGTCAAATTCACGCGCTCAGTTCCACTATCGGCAGCTCT
AAAGTCGCTGTGATGGCGCAGCGGATCCGTGAAATTAATCCTGATTGCCAAGTGAATGAAATTGAAGATTTTATTACATT
GGATAATCTAGGCGAGTATTTGCTCGGGGCTAAAGAGGGCGGCAATATTGATTATGTTATTGACTGTATTGATGCCGTTA
AGCAAAAGGCCGCGTTAATTGCCTGGTGTAAACGTCAAAAAATCAAGATTGTTACGGTAGGCGGTGCGGGTGGTCAGACA
GATCCGACTCAAATTCAGTTAACTGATCTCGCTAAAACCTACCAAGATCCTTTGTTAGCCAAAGTGCGCAATATTTTGCG
CCGCGAATATAACTTCTCTAAAAACGTGCAACGCCGATTTTCTATCGATGCTGTTTTTTCCAGTGAGCAGTTAGTTTATC
CGCAAGCCGATGGCTCTGTTTGTGGTACTAAAGCGGCGGCCGATGGCAGCATGAGAATGGATTGTGCGTCAGGTTTTGGC
GCTGTCACTATGGTCACAGGGACATTTGGTTTTGTGGCGGCAAGCCGAGTATTAGCGCGCTTAGCGCTGCAGGCTCAAGA
AACGCTTTAA

Upstream 100 bases:

>100_bases
CGCACATTTCTGGTGTTGCTATTAAGCTGCCTCTGTTGGCATCCATTCGATGCTAGGGCAAGCGCTCCTGCTGTTATTGG
GTAATATAAGGTAAGTATTT

Downstream 100 bases:

>100_bases
AGGGTTAACGTTTTTCTACTGATGATTTCACCGCTCGTATGAGCGGTGAGTATCACTGCAATATTGTGTCATTCCACTGC
GTTATATCTAGATATAAAAA

Product: UBA/THIF-type NAD/FAD binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 269; Mature: 268

Protein sequence:

>269_residues
MTEAYLNRFGGIGRLYGQKALAKFATSHVVVIGIGGVGTWAAEALARSGIGQISLMDLDDICVTNTNRQIHALSSTIGSS
KVAVMAQRIREINPDCQVNEIEDFITLDNLGEYLLGAKEGGNIDYVIDCIDAVKQKAALIAWCKRQKIKIVTVGGAGGQT
DPTQIQLTDLAKTYQDPLLAKVRNILRREYNFSKNVQRRFSIDAVFSSEQLVYPQADGSVCGTKAAADGSMRMDCASGFG
AVTMVTGTFGFVAASRVLARLALQAQETL

Sequences:

>Translated_269_residues
MTEAYLNRFGGIGRLYGQKALAKFATSHVVVIGIGGVGTWAAEALARSGIGQISLMDLDDICVTNTNRQIHALSSTIGSS
KVAVMAQRIREINPDCQVNEIEDFITLDNLGEYLLGAKEGGNIDYVIDCIDAVKQKAALIAWCKRQKIKIVTVGGAGGQT
DPTQIQLTDLAKTYQDPLLAKVRNILRREYNFSKNVQRRFSIDAVFSSEQLVYPQADGSVCGTKAAADGSMRMDCASGFG
AVTMVTGTFGFVAASRVLARLALQAQETL
>Mature_268_residues
TEAYLNRFGGIGRLYGQKALAKFATSHVVVIGIGGVGTWAAEALARSGIGQISLMDLDDICVTNTNRQIHALSSTIGSSK
VAVMAQRIREINPDCQVNEIEDFITLDNLGEYLLGAKEGGNIDYVIDCIDAVKQKAALIAWCKRQKIKIVTVGGAGGQTD
PTQIQLTDLAKTYQDPLLAKVRNILRREYNFSKNVQRRFSIDAVFSSEQLVYPQADGSVCGTKAAADGSMRMDCASGFGA
VTMVTGTFGFVAASRVLARLALQAQETL

Specific function: Unknown

COG id: COG1179

COG function: function code H; Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hesA/moeB/thiF family [H]

Homologues:

Organism=Escherichia coli, GI1789177, Length=265, Percent_Identity=59.2452830188679, Blast_Score=338, Evalue=2e-94,
Organism=Escherichia coli, GI87082356, Length=147, Percent_Identity=35.3741496598639, Blast_Score=75, Evalue=4e-15,
Organism=Escherichia coli, GI1787048, Length=136, Percent_Identity=31.6176470588235, Blast_Score=69, Evalue=4e-13,
Organism=Saccharomyces cerevisiae, GI6322825, Length=194, Percent_Identity=34.020618556701, Blast_Score=100, Evalue=2e-22,
Organism=Saccharomyces cerevisiae, GI6321790, Length=248, Percent_Identity=25, Blast_Score=99, Evalue=6e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009036
- InterPro:   IPR016040
- InterPro:   IPR000594 [H]

Pfam domain/function: PF00899 ThiF [H]

EC number: NA

Molecular weight: Translated: 28919; Mature: 28787

Theoretical pI: Translated: 8.10; Mature: 8.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEAYLNRFGGIGRLYGQKALAKFATSHVVVIGIGGVGTWAAEALARSGIGQISLMDLDD
CCHHHHHHHCCHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHCCCCEEEEEECCC
ICVTNTNRQIHALSSTIGSSKVAVMAQRIREINPDCQVNEIEDFITLDNLGEYLLGAKEG
EEEECCCCEEEHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCC
GNIDYVIDCIDAVKQKAALIAWCKRQKIKIVTVGGAGGQTDPTQIQLTDLAKTYQDPLLA
CCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCEEEHHHHHHHHHCHHHH
KVRNILRREYNFSKNVQRRFSIDAVFSSEQLVYPQADGSVCGTKAAADGSMRMDCASGFG
HHHHHHHHHCCCCCCHHHHEEEEEEECCCEEEEECCCCCCCCCCCCCCCCCEEEHHCCCC
AVTMVTGTFGFVAASRVLARLALQAQETL
EEEEEHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TEAYLNRFGGIGRLYGQKALAKFATSHVVVIGIGGVGTWAAEALARSGIGQISLMDLDD
CHHHHHHHCCHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHCCCCEEEEEECCC
ICVTNTNRQIHALSSTIGSSKVAVMAQRIREINPDCQVNEIEDFITLDNLGEYLLGAKEG
EEEECCCCEEEHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCC
GNIDYVIDCIDAVKQKAALIAWCKRQKIKIVTVGGAGGQTDPTQIQLTDLAKTYQDPLLA
CCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCEEEHHHHHHHHHCHHHH
KVRNILRREYNFSKNVQRRFSIDAVFSSEQLVYPQADGSVCGTKAAADGSMRMDCASGFG
HHHHHHHHHCCCCCCHHHHEEEEEEECCCEEEEECCCCCCCCCCCCCCCCCEEEHHCCCC
AVTMVTGTFGFVAASRVLARLALQAQETL
EEEEEHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]