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The map label for this gene is yaaJ [C]

Identifier: 126175703

GI number: 126175703

Start: 4110781

End: 4112139

Strand: Reverse

Name: yaaJ [C]

Synonym: Sbal_3506

Alternate gene names: 126175703

Gene position: 4112139-4110781 (Counterclockwise)

Preceding gene: 126175710

Following gene: 126175702

Centisome position: 80.2

GC content: 50.92

Gene sequence:

>1359_bases
ATGAGTTTTCAAGCTTTTCTTGCCAGCATTAATGGCATCGTCTGGGGCCCAATCACCCTTTGTTTGCTGGTGGGCACGGG
GATTTATCTCACTGCACGCCTCAAGCTTATCCAAGTTATCCGTCTGCCTATGGCGCTGGGATTATTATTCAAACCGGCAA
AAGGTCATGGGGATTTATCTTCCTTCGCAGCGCTCTGTACTGCGCTGTCCGCCACTATCGGTACCGGTAATATTGTCGGT
GTAGCGACAGCCATCAAAATGGGTGGACCAGGCGCATTATTTTGGATGTGGCTGGCGGCATTTTTTGGCATGGCGACTAA
ATATGCCGAGTGTATGTTGGCGGTAAAATATCGCACGACCGATGCGCGCGGGCAGATTGCGGGTGGCCCAATGTACTATA
TCGAGCGCGGACTTGGTCTGCCTTGGATGGCGAAATTGTTCGCTATCTTCGGGGTTGGTGTGGCCTTTTTCGGCATAGGT
ACTTTTGCACAAGTTAACGCCATCAGCGATGCGCTGACGATTGCCTTTGAGGTGCCGACTTGGTTGACCGCGACTGTGTT
GACTGTGTTAGTTGCTGCTGTCACTTTAGGTGGGGTTAAGCGCATTTCGAATGTGGCGCAAAAGCTAGTGCCTGCCATGT
CGATTGGTTATGTGCTGGCCTGCGTGTGGATTTTAGTGGGATTTTCTGAGCAAATTTTACCCGCCTTAGGTTTAGTGATT
GAATCGGCCTTTACGCCACTCTCGGCAGCGGGAGGTTTTTTAGGGGCGACAGTGGCGCAGGCGATTCAAATCGGTATCGC
TCGCGGCGTGTTCTCCAATGAATCAGGTCTTGGTAGTGCGCCCATTGCTGCGGCAGCCGCTAAGACCAATGAACCCGTTG
AGCAAGGTTTAGTCAGCATGACGGGCACCTTCTTCGATACGATCATTATTTGTACTATGACGGGCTTAGTGCTGATCATC
ACAGGTGTGTGGAGTGGTGAAACTGCGGGCGCGGCAATGACGAGCGCGGCGTTTGCCCTCGGTGGCTCTGCGGTTGTGGG
TCAGTATCTGGTGACCATTGCGCTGGTGTGTTTTGCATTCACGACGATTCTAGGCTGGCATTATTACGGTGAACGCTGTT
GGTATTACTTGGTCGGCGAGCGCGGTTTACGCTTGTATCAAGTGGTGTTTTTAGTACTGATCGCAGGTGGTGCTTTTATC
AAGCTCGATGTGATTTGGTTGTTGGCCGATACGGTTAATGGCTTGATGGCGATTCCAAACTTGATCGCGATTGTAGGCTT
GAGGCATATCATTATCGCCGAAACCCAAAGCTATTTTGCCCGTATCTTACCGAATCAAACCTTAGATACCGTTTATTAG

Upstream 100 bases:

>100_bases
GCTAGAAATAGTTTGCAATAGCGTCCGACTGCGGCGCGTCACAGCCATTTCTTTTCCTCCTCCGTTTATTAATTTTGTTG
TTTAATATTCGAGGAATATC

Downstream 100 bases:

>100_bases
TGTTTTTAAAACAATAAATTACTTCACATTATTTTAACTTTGACATTGTCGCCACTGGATTCTTCGTTTACTTTATATGC
ACTATTTAAAAAATAGTGCA

Product: amino acid carrier protein

Products: Na (I) [Cytoplasm]; L-alanine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 452; Mature: 451

Protein sequence:

>452_residues
MSFQAFLASINGIVWGPITLCLLVGTGIYLTARLKLIQVIRLPMALGLLFKPAKGHGDLSSFAALCTALSATIGTGNIVG
VATAIKMGGPGALFWMWLAAFFGMATKYAECMLAVKYRTTDARGQIAGGPMYYIERGLGLPWMAKLFAIFGVGVAFFGIG
TFAQVNAISDALTIAFEVPTWLTATVLTVLVAAVTLGGVKRISNVAQKLVPAMSIGYVLACVWILVGFSEQILPALGLVI
ESAFTPLSAAGGFLGATVAQAIQIGIARGVFSNESGLGSAPIAAAAAKTNEPVEQGLVSMTGTFFDTIIICTMTGLVLII
TGVWSGETAGAAMTSAAFALGGSAVVGQYLVTIALVCFAFTTILGWHYYGERCWYYLVGERGLRLYQVVFLVLIAGGAFI
KLDVIWLLADTVNGLMAIPNLIAIVGLRHIIIAETQSYFARILPNQTLDTVY

Sequences:

>Translated_452_residues
MSFQAFLASINGIVWGPITLCLLVGTGIYLTARLKLIQVIRLPMALGLLFKPAKGHGDLSSFAALCTALSATIGTGNIVG
VATAIKMGGPGALFWMWLAAFFGMATKYAECMLAVKYRTTDARGQIAGGPMYYIERGLGLPWMAKLFAIFGVGVAFFGIG
TFAQVNAISDALTIAFEVPTWLTATVLTVLVAAVTLGGVKRISNVAQKLVPAMSIGYVLACVWILVGFSEQILPALGLVI
ESAFTPLSAAGGFLGATVAQAIQIGIARGVFSNESGLGSAPIAAAAAKTNEPVEQGLVSMTGTFFDTIIICTMTGLVLII
TGVWSGETAGAAMTSAAFALGGSAVVGQYLVTIALVCFAFTTILGWHYYGERCWYYLVGERGLRLYQVVFLVLIAGGAFI
KLDVIWLLADTVNGLMAIPNLIAIVGLRHIIIAETQSYFARILPNQTLDTVY
>Mature_451_residues
SFQAFLASINGIVWGPITLCLLVGTGIYLTARLKLIQVIRLPMALGLLFKPAKGHGDLSSFAALCTALSATIGTGNIVGV
ATAIKMGGPGALFWMWLAAFFGMATKYAECMLAVKYRTTDARGQIAGGPMYYIERGLGLPWMAKLFAIFGVGVAFFGIGT
FAQVNAISDALTIAFEVPTWLTATVLTVLVAAVTLGGVKRISNVAQKLVPAMSIGYVLACVWILVGFSEQILPALGLVIE
SAFTPLSAAGGFLGATVAQAIQIGIARGVFSNESGLGSAPIAAAAAKTNEPVEQGLVSMTGTFFDTIIICTMTGLVLIIT
GVWSGETAGAAMTSAAFALGGSAVVGQYLVTIALVCFAFTTILGWHYYGERCWYYLVGERGLRLYQVVFLVLIAGGAFIK
LDVIWLLADTVNGLMAIPNLIAIVGLRHIIIAETQSYFARILPNQTLDTVY

Specific function: Unknown

COG id: COG1115

COG function: function code E; Na+/alanine symporter

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:alanine (SAF) symporter family [H]

Homologues:

Organism=Escherichia coli, GI1786188, Length=450, Percent_Identity=37.1111111111111, Blast_Score=246, Evalue=2e-66,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001463 [H]

Pfam domain/function: PF01235 Na_Ala_symp [H]

EC number: NA

Molecular weight: Translated: 47558; Mature: 47427

Theoretical pI: Translated: 8.44; Mature: 8.44

Prosite motif: PS00873 NA_ALANINE_SYMP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFQAFLASINGIVWGPITLCLLVGTGIYLTARLKLIQVIRLPMALGLLFKPAKGHGDLS
CCHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH
SFAALCTALSATIGTGNIVGVATAIKMGGPGALFWMWLAAFFGMATKYAECMLAVKYRTT
HHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECC
DARGQIAGGPMYYIERGLGLPWMAKLFAIFGVGVAFFGIGTFAQVNAISDALTIAFEVPT
CCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCH
WLTATVLTVLVAAVTLGGVKRISNVAQKLVPAMSIGYVLACVWILVGFSEQILPALGLVI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
ESAFTPLSAAGGFLGATVAQAIQIGIARGVFSNESGLGSAPIAAAAAKTNEPVEQGLVSM
HHHCCCHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHH
TGTFFDTIIICTMTGLVLIITGVWSGETAGAAMTSAAFALGGSAVVGQYLVTIALVCFAF
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
TTILGWHYYGERCWYYLVGERGLRLYQVVFLVLIAGGAFIKLDVIWLLADTVNGLMAIPN
HHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
LIAIVGLRHIIIAETQSYFARILPNQTLDTVY
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCC
>Mature Secondary Structure 
SFQAFLASINGIVWGPITLCLLVGTGIYLTARLKLIQVIRLPMALGLLFKPAKGHGDLS
CHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH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HHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Na (I) [Periplasm]; L-alanine [Periplasm] [C]

Specific reaction: Na (I) [Periplasm] + L-alanine [Periplasm] = Na (I) [Cytoplasm] + L-alanine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]