| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
Click here to switch to the map view.
The map label for this gene is 126175662
Identifier: 126175662
GI number: 126175662
Start: 4064094
End: 4065140
Strand: Reverse
Name: 126175662
Synonym: Sbal_3465
Alternate gene names: NA
Gene position: 4065140-4064094 (Counterclockwise)
Preceding gene: 126175664
Following gene: 126175660
Centisome position: 79.28
GC content: 50.33
Gene sequence:
>1047_bases ATGACAGCGATACAGCATATTGAACGCCTTGCTCGAGGTCGCAGTGAACAGGCCGTCGCTGTGATTAAAAATGTGCAGCA GATGTCGAACATCCCCATGCATGAGATGCAACTCGCCCTCAAACAATTGCTCAACTGCGGCCGAATTGCGCTGCATTTTC ACCCCGATAGAATCGACAGCCGTGGTATGACAGTGGCCGAAGGTTTGCTGCGCGATGGTCAATACCGCAGTCAGTTTGAG ACCCATATTTCCAACGGTCAGTTATCCCCTGAATTAGGTGGCCCAAGGGATCACTGGGAAAATCAGCTGTTTGGTGATGT ATACAAGGGCACTAAATCTCGGCCTAAATATGGCGCACTTGATCTGGGGATGTGGCAGGACGGTCCCGCGCCGCGTTTTG GTAGCTGCTATTTGCTGACCCACGCCAGTGTGATGGCACGTTCAACCTTTTGTTATCTCGACTCGTACCGCAATCCGAAA GAGAAGGGCACACTGTCATGTTTCGATGATGTGTTAGCGGCGCTGCTGACCGAGAGTTTTGAGCGTCACTATGCCTTAGG CAAATCCGACTTTAAGCCGCTGAATGTGATTCATTATTTGGGGCATCAACTCAATGCTTCCTTGCTGTCACGTTTTGAGC GGCCGTTATCGAATAATCTCGATCATTATATCGAGGCGCAGATCCACGGTGATGTTTCCCTCGATGAAGATATCGCCATG CTGGTGGCCGATCCAAGTTTTAAAGGCACTGATATTGGCGCCAGCTTAAGTAAGATTTGCGACAGATATGATATTGAGCT GCAATATCATGATGGTTTTAGCCTACATACGGCGCAGATCCCCAGTGATTTTCGCGGGCCGACTATGCCATCGCAGGCTA ATCGTATCGCCATAGAAGACAGAGTCGATGCCTATGCCATAGGTGTGGCAGCGCGGGATTTATATCATTCACCCCAGCAT TGGCGTGACCGCGGTAATCGTGCGCAAGTCGCCCATGAACTTAAGTTGCTCTGGCATGTGTTAGTGAAATACGGCGCAGT GCAGTGA
Upstream 100 bases:
>100_bases ATCAATATCTATTCTCTGCATGCTTGCGATTACTCTCGTGTTTATTTTAGGATGAGCTAACGCGGGAAACGGTTAAACGC CTCTCATTTATAGGTGGATT
Downstream 100 bases:
>100_bases GGGTTACGTTTTTAAAAAAACGTTTGATTGTAAAATGTGGCGCTAACAAAAACAGCGAGATAACCTCAGGTTAGCTCGCT GTTTTTCTATTATATTTCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 348; Mature: 347
Protein sequence:
>348_residues MTAIQHIERLARGRSEQAVAVIKNVQQMSNIPMHEMQLALKQLLNCGRIALHFHPDRIDSRGMTVAEGLLRDGQYRSQFE THISNGQLSPELGGPRDHWENQLFGDVYKGTKSRPKYGALDLGMWQDGPAPRFGSCYLLTHASVMARSTFCYLDSYRNPK EKGTLSCFDDVLAALLTESFERHYALGKSDFKPLNVIHYLGHQLNASLLSRFERPLSNNLDHYIEAQIHGDVSLDEDIAM LVADPSFKGTDIGASLSKICDRYDIELQYHDGFSLHTAQIPSDFRGPTMPSQANRIAIEDRVDAYAIGVAARDLYHSPQH WRDRGNRAQVAHELKLLWHVLVKYGAVQ
Sequences:
>Translated_348_residues MTAIQHIERLARGRSEQAVAVIKNVQQMSNIPMHEMQLALKQLLNCGRIALHFHPDRIDSRGMTVAEGLLRDGQYRSQFE THISNGQLSPELGGPRDHWENQLFGDVYKGTKSRPKYGALDLGMWQDGPAPRFGSCYLLTHASVMARSTFCYLDSYRNPK EKGTLSCFDDVLAALLTESFERHYALGKSDFKPLNVIHYLGHQLNASLLSRFERPLSNNLDHYIEAQIHGDVSLDEDIAM LVADPSFKGTDIGASLSKICDRYDIELQYHDGFSLHTAQIPSDFRGPTMPSQANRIAIEDRVDAYAIGVAARDLYHSPQH WRDRGNRAQVAHELKLLWHVLVKYGAVQ >Mature_347_residues TAIQHIERLARGRSEQAVAVIKNVQQMSNIPMHEMQLALKQLLNCGRIALHFHPDRIDSRGMTVAEGLLRDGQYRSQFET HISNGQLSPELGGPRDHWENQLFGDVYKGTKSRPKYGALDLGMWQDGPAPRFGSCYLLTHASVMARSTFCYLDSYRNPKE KGTLSCFDDVLAALLTESFERHYALGKSDFKPLNVIHYLGHQLNASLLSRFERPLSNNLDHYIEAQIHGDVSLDEDIAML VADPSFKGTDIGASLSKICDRYDIELQYHDGFSLHTAQIPSDFRGPTMPSQANRIAIEDRVDAYAIGVAARDLYHSPQHW RDRGNRAQVAHELKLLWHVLVKYGAVQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39297; Mature: 39166
Theoretical pI: Translated: 7.02; Mature: 7.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAIQHIERLARGRSEQAVAVIKNVQQMSNIPMHEMQLALKQLLNCGRIALHFHPDRIDS CCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEEEECCCCCCC RGMTVAEGLLRDGQYRSQFETHISNGQLSPELGGPRDHWENQLFGDVYKGTKSRPKYGAL CCCHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCE DLGMWQDGPAPRFGSCYLLTHASVMARSTFCYLDSYRNPKEKGTLSCFDDVLAALLTESF ECCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH ERHYALGKSDFKPLNVIHYLGHQLNASLLSRFERPLSNNLDHYIEAQIHGDVSLDEDIAM HHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEE LVADPSFKGTDIGASLSKICDRYDIELQYHDGFSLHTAQIPSDFRGPTMPSQANRIAIED EEECCCCCCCCCCHHHHHHHHHHCEEEEECCCCEEEEECCCCCCCCCCCCCCCCEEEEHH RVDAYAIGVAARDLYHSPQHWRDRGNRAQVAHELKLLWHVLVKYGAVQ CCCHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TAIQHIERLARGRSEQAVAVIKNVQQMSNIPMHEMQLALKQLLNCGRIALHFHPDRIDS CHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEEEECCCCCCC RGMTVAEGLLRDGQYRSQFETHISNGQLSPELGGPRDHWENQLFGDVYKGTKSRPKYGAL CCCHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCE DLGMWQDGPAPRFGSCYLLTHASVMARSTFCYLDSYRNPKEKGTLSCFDDVLAALLTESF ECCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH ERHYALGKSDFKPLNVIHYLGHQLNASLLSRFERPLSNNLDHYIEAQIHGDVSLDEDIAM HHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEE LVADPSFKGTDIGASLSKICDRYDIELQYHDGFSLHTAQIPSDFRGPTMPSQANRIAIED EEECCCCCCCCCCHHHHHHHHHHCEEEEECCCCEEEEECCCCCCCCCCCCCCCCEEEEHH RVDAYAIGVAARDLYHSPQHWRDRGNRAQVAHELKLLWHVLVKYGAVQ CCCHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA