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The map label for this gene is yfbS [C]

Identifier: 126175603

GI number: 126175603

Start: 3989039

End: 3990763

Strand: Reverse

Name: yfbS [C]

Synonym: Sbal_3406

Alternate gene names: 126175603

Gene position: 3990763-3989039 (Counterclockwise)

Preceding gene: 126175604

Following gene: 126175602

Centisome position: 77.83

GC content: 49.39

Gene sequence:

>1725_bases
GTGAGTGACTTGTGGCTGTTAGCGATTATTTTGTTAGGTCTTGTGGCTGGCTTAATTAGCGGCCGTATCAATCCCGCGGT
ATTGTTTTTATTTGCATTTTTGCTCTGTTATTTGCTTGGCATGGTTGCGCTCGATACCGCATTAACAAGCTTTACAAATA
TTGGCTTAGTCACGCTTGTTCTGTTGGTATTGGCCGCGACGGCGTTAGAAAAAACGTCCCTGCTGGGAAAGTTGAGTCAA
GTCATAGGCAATAGTTCTTTGCCTATGACAATGGCAAAGCTTGGGCTATCGACCGCCTTGCTGTCGTCCTTTACCAATAA
CACTGCGGTGGTGGCGTCGCTTATCGGGGTTGTGCGCCGTAATCAAGCACACGCACCCGCTAAGTTATTGTTGCCGTTAA
ATTATGCGGCAATTTTAGGTGGCACACTGACCCTGATTGGTACCTCGACCAACTTGATTGTGAACTCCTTTGTGGAGAAC
GCCGGCTTACCCGCCTTAGGATTCTTCGAGTTCACGCCGGTCGCGGTTGTGATCGTCGTCGCTGGCATCTTGTTATTGAT
CTTACTAGCGAACATTCTGCCCGACAGACGGGAAGAGTCGGGTGAAGAGGCGCTGCCTTACTTGCTCGAAGCCCATGTGG
CAAAAGGCTCATCCTTAGTCGGTCGCAGTGTGGTGGATAACAAACTCAGGGCGCTGAAGAAGTTATATCTGGTTGAACTA
GAACGCAGCGGCATTTGTATTTGCCCTGTGCCGCCCCAGTTAGTGCTGCAAGCGGACGACGTGCTGCGCTTCAGTGGCGC
GGTGGAATCGGTTGAGTTATTGCATCAATTCGATGGATTAGATTGGTTTGGTAAGCATCAAGCTAAGGGACAAAATTTAG
TTGAAGCTGTGCTCGCGCCATCATCTAGTTTAGTCGGCAGTTCGTTGAAAGAGTCACGTTTTCGTGAACAGTTCGATGCG
GCCGTGATGGCGATCCGCCGCGGCAATCATCCGCTGAAGGGCGGGCTTGGCGACATTATTCTGCAACCCGGTGATGTGTT
GTTATTGACGCCAGGCGATGGTTTCAGCAATAGCGCAAAATTGAGTTCAGAATTTGCGGCGATCAGCGGCTTAGATTTGA
ATGTGCGGTTAGACAGTCGCCGTGGTCGTTGGGTATTGCTCGGCTTTGCGGTCACGATCGTTTTGAGTGTCACCGGTGTA
TTGCCATTGGCTAAAGGTTTAGTGCTCCTGCTGCTGAGTTATTTTGTTATTGGCGCTGTCACTTTGGCTGAGCTTAAACG
CCGTTTTCCATTGGAATTAGTGGTGATAGTGGGGAGTGCGTTAGGGCTCGCTAACTTGATGATGAGCACCGGCCTTGCGG
ACAGTTTAGCCCAAGGATTACTCTCGGTTATCAATGGTTATGGGGTGTTTGGCGCGTTTGTTGGTGTGTATTTTATGACC
TTGTTGTTGACTGAATTGGTCACCAACAACGCCGCCGCAGCGTTGGCTTTCCCTATCGCCTACGCAATTGCGCTTAATTA
CGGTGTCGATGCAAGACCCTTTATTATGGCCGTGGTCTTTGGTGCCAGCGCGAGCTTTATTTCACCCTACGGCTATCAAA
CCAATTTGATGGTATTTAACGCGGGTAATTATCGCTTCAGTGACTTCGTCCGCCTAGGATTGCCGTTATCTGTGCTGTAT
TCCCTGATAGTGATATTTATGGTGCCGATCATCTTTCCTTTTTAG

Upstream 100 bases:

>100_bases
ATCACAATTTAGTGCCTTTGAAGTTGAGTTTAATGCCTTAGTGCGTAAACACTACCCACATTGGCAAGCGATAGATATCT
CTAAGCTTGGAGCTTAATTT

Downstream 100 bases:

>100_bases
TGATTAGCTTGAGTTTATTGCCCTTATGTTAGCCGTTTAACAGCATGGGGATTGAGGAGTTTTTATGACAAATATCTTGT
GGCATCAACATCCTGTAGAT

Product: TrkA domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 574; Mature: 573

Protein sequence:

>574_residues
MSDLWLLAIILLGLVAGLISGRINPAVLFLFAFLLCYLLGMVALDTALTSFTNIGLVTLVLLVLAATALEKTSLLGKLSQ
VIGNSSLPMTMAKLGLSTALLSSFTNNTAVVASLIGVVRRNQAHAPAKLLLPLNYAAILGGTLTLIGTSTNLIVNSFVEN
AGLPALGFFEFTPVAVVIVVAGILLLILLANILPDRREESGEEALPYLLEAHVAKGSSLVGRSVVDNKLRALKKLYLVEL
ERSGICICPVPPQLVLQADDVLRFSGAVESVELLHQFDGLDWFGKHQAKGQNLVEAVLAPSSSLVGSSLKESRFREQFDA
AVMAIRRGNHPLKGGLGDIILQPGDVLLLTPGDGFSNSAKLSSEFAAISGLDLNVRLDSRRGRWVLLGFAVTIVLSVTGV
LPLAKGLVLLLLSYFVIGAVTLAELKRRFPLELVVIVGSALGLANLMMSTGLADSLAQGLLSVINGYGVFGAFVGVYFMT
LLLTELVTNNAAAALAFPIAYAIALNYGVDARPFIMAVVFGASASFISPYGYQTNLMVFNAGNYRFSDFVRLGLPLSVLY
SLIVIFMVPIIFPF

Sequences:

>Translated_574_residues
MSDLWLLAIILLGLVAGLISGRINPAVLFLFAFLLCYLLGMVALDTALTSFTNIGLVTLVLLVLAATALEKTSLLGKLSQ
VIGNSSLPMTMAKLGLSTALLSSFTNNTAVVASLIGVVRRNQAHAPAKLLLPLNYAAILGGTLTLIGTSTNLIVNSFVEN
AGLPALGFFEFTPVAVVIVVAGILLLILLANILPDRREESGEEALPYLLEAHVAKGSSLVGRSVVDNKLRALKKLYLVEL
ERSGICICPVPPQLVLQADDVLRFSGAVESVELLHQFDGLDWFGKHQAKGQNLVEAVLAPSSSLVGSSLKESRFREQFDA
AVMAIRRGNHPLKGGLGDIILQPGDVLLLTPGDGFSNSAKLSSEFAAISGLDLNVRLDSRRGRWVLLGFAVTIVLSVTGV
LPLAKGLVLLLLSYFVIGAVTLAELKRRFPLELVVIVGSALGLANLMMSTGLADSLAQGLLSVINGYGVFGAFVGVYFMT
LLLTELVTNNAAAALAFPIAYAIALNYGVDARPFIMAVVFGASASFISPYGYQTNLMVFNAGNYRFSDFVRLGLPLSVLY
SLIVIFMVPIIFPF
>Mature_573_residues
SDLWLLAIILLGLVAGLISGRINPAVLFLFAFLLCYLLGMVALDTALTSFTNIGLVTLVLLVLAATALEKTSLLGKLSQV
IGNSSLPMTMAKLGLSTALLSSFTNNTAVVASLIGVVRRNQAHAPAKLLLPLNYAAILGGTLTLIGTSTNLIVNSFVENA
GLPALGFFEFTPVAVVIVVAGILLLILLANILPDRREESGEEALPYLLEAHVAKGSSLVGRSVVDNKLRALKKLYLVELE
RSGICICPVPPQLVLQADDVLRFSGAVESVELLHQFDGLDWFGKHQAKGQNLVEAVLAPSSSLVGSSLKESRFREQFDAA
VMAIRRGNHPLKGGLGDIILQPGDVLLLTPGDGFSNSAKLSSEFAAISGLDLNVRLDSRRGRWVLLGFAVTIVLSVTGVL
PLAKGLVLLLLSYFVIGAVTLAELKRRFPLELVVIVGSALGLANLMMSTGLADSLAQGLLSVINGYGVFGAFVGVYFMTL
LLTELVTNNAAAALAFPIAYAIALNYGVDARPFIMAVVFGASASFISPYGYQTNLMVFNAGNYRFSDFVRLGLPLSVLYS
LIVIFMVPIIFPF

Specific function: Unknown

COG id: COG0471

COG function: function code P; Di- and tricarboxylate transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 RCK C-terminal domains [H]

Homologues:

Organism=Escherichia coli, GI1788629, Length=612, Percent_Identity=27.7777777777778, Blast_Score=164, Evalue=1e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001898
- InterPro:   IPR006037 [H]

Pfam domain/function: PF00939 Na_sulph_symp; PF02080 TrkA_C [H]

EC number: NA

Molecular weight: Translated: 60964; Mature: 60833

Theoretical pI: Translated: 8.05; Mature: 8.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDLWLLAIILLGLVAGLISGRINPAVLFLFAFLLCYLLGMVALDTALTSFTNIGLVTLV
CCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLVLAATALEKTSLLGKLSQVIGNSSLPMTMAKLGLSTALLSSFTNNTAVVASLIGVVRR
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHC
NQAHAPAKLLLPLNYAAILGGTLTLIGTSTNLIVNSFVENAGLPALGFFEFTPVAVVIVV
CCCCCCEEEEEECCHHHHHCCCEEEEECCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
AGILLLILLANILPDRREESGEEALPYLLEAHVAKGSSLVGRSVVDNKLRALKKLYLVEL
HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHEE
ERSGICICPVPPQLVLQADDVLRFSGAVESVELLHQFDGLDWFGKHQAKGQNLVEAVLAP
CCCCEEEECCCHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCC
SSSLVGSSLKESRFREQFDAAVMAIRRGNHPLKGGLGDIILQPGDVLLLTPGDGFSNSAK
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCEEEECCCCCCCCCCH
LSSEFAAISGLDLNVRLDSRRGRWVLLGFAVTIVLSVTGVLPLAKGLVLLLLSYFVIGAV
HHHHHHHHCCCEEEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TLAELKRRFPLELVVIVGSALGLANLMMSTGLADSLAQGLLSVINGYGVFGAFVGVYFMT
HHHHHHHHCCCEEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
LLLTELVTNNAAAALAFPIAYAIALNYGVDARPFIMAVVFGASASFISPYGYQTNLMVFN
HHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCEEEEEEEE
AGNYRFSDFVRLGLPLSVLYSLIVIFMVPIIFPF
CCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SDLWLLAIILLGLVAGLISGRINPAVLFLFAFLLCYLLGMVALDTALTSFTNIGLVTLV
CHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLVLAATALEKTSLLGKLSQVIGNSSLPMTMAKLGLSTALLSSFTNNTAVVASLIGVVRR
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHC
NQAHAPAKLLLPLNYAAILGGTLTLIGTSTNLIVNSFVENAGLPALGFFEFTPVAVVIVV
CCCCCCEEEEEECCHHHHHCCCEEEEECCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
AGILLLILLANILPDRREESGEEALPYLLEAHVAKGSSLVGRSVVDNKLRALKKLYLVEL
HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHEE
ERSGICICPVPPQLVLQADDVLRFSGAVESVELLHQFDGLDWFGKHQAKGQNLVEAVLAP
CCCCEEEECCCHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCC
SSSLVGSSLKESRFREQFDAAVMAIRRGNHPLKGGLGDIILQPGDVLLLTPGDGFSNSAK
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCEEEECCCCCCCCCCH
LSSEFAAISGLDLNVRLDSRRGRWVLLGFAVTIVLSVTGVLPLAKGLVLLLLSYFVIGAV
HHHHHHHHCCCEEEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TLAELKRRFPLELVVIVGSALGLANLMMSTGLADSLAQGLLSVINGYGVFGAFVGVYFMT
HHHHHHHHCCCEEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
LLLTELVTNNAAAALAFPIAYAIALNYGVDARPFIMAVVFGASASFISPYGYQTNLMVFN
HHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCEEEEEEEE
AGNYRFSDFVRLGLPLSVLYSLIVIFMVPIIFPF
CCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]