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The map label for this gene is fecD [C]

Identifier: 126175562

GI number: 126175562

Start: 3931060

End: 3932154

Strand: Reverse

Name: fecD [C]

Synonym: Sbal_3365

Alternate gene names: 126175562

Gene position: 3932154-3931060 (Counterclockwise)

Preceding gene: 126175563

Following gene: 126175561

Centisome position: 76.69

GC content: 53.24

Gene sequence:

>1095_bases
TTGGGGCGTATCGTGACACCTTTGACGAGACAACAACTGATGCTGGTCGCATTAGGCATAATCACTTTGATAACCCCCAT
TGCCGCCACGAGTTTTGGCGCGGCGAACATCAGCTTTATGGATGTTATCCAAGTGTTTATCAATAAAATGGCCAGCCTCA
CTCAAGCCAATGGCATGACGGAGCGCATCGTGATGGAGCTCAGACTGCCGCGTATTTTGCTGGCCTTTGTGGCGGGTGCG
GGTTTGTCCTTGGCGGGTAGTGTGCTGCAAACCGTGACCCGCAATCCGCTGGCCGACCCTTATCTGTTTGGCATTAGCTC
TGGCGCGTCCTTTGGCGCCGTGGTGATGTTGACGTTATTCACGGGCTCTGGATTTTTTGAAAATGCGGGCATGGCGGCGA
ACTCGGGGATTTTTAGTGGCTCGGGCGCCTTGTCGGGTTTGCTTTGGTTTAGCTTGCCCTTCGGCGCTTTTATTGGCGCC
AGTTTGTCGGTACTGATAGTGCTGGCCTTGTCTGGCCTTGGGCTCAATAGCCAAGTGGAGCGCATGTTGCTCTCAGGCGT
GGCGACCTCCTTTATGTTCGGCGCGCTAACGAGTCTGCTGCTGTATTTCGCCAGTCCGCAGGCGACGGCTTCTGTTTTGT
TTTGGAGTTTAGGCAGTTTTGCCAAGGCCAGTTGGTCCTTATTAGTGCTGCCGACACTGGTGATTGGCGCGAGTTTGTTC
ATTATTTTAGGCATGAAACGGCAGATCATGGCGTTGCAAGCGGGGGATGAAACGGCGCATACCTTAGGGGTGAATGTGCC
TAAGTTGCGACTCAATATGTTGCTGCTCTGCTCCTTGATTACCGCGATTTTGGTCGCCACCTGCGGCGGGATTGGCTTTG
TCGGTTTGATGATCCCCCACACAGTGCGCATGCTGTTTCCCGGTCGTCAGCCGATTCTATTAACGGCGCTGGTGGGCGGA
TTATTTATGGTGTGGATTGATGTGCTGGCGCGCTGTTTGTTGGGCAATCAAGAGTTGCCTGTGGGCATTATCACAGCGGC
CATAGGTAGCATGTTCTTTTTGCTGATTTTGCGTAAACGCAGAGTCATGGCGTAA

Upstream 100 bases:

>100_bases
TTCTATGGCTACCATGATTCGACGCACAACATGGCTGATGCTTTGGCTGAGCGAGGCGAGGGCGGATGATTCAGGGAGTA
AACAGCATTTCATCTCACAT

Downstream 100 bases:

>100_bases
GCACCTAGTCAGAACGTAATCCTAGAGTCATCTAGCAAGCGCAGACTGGCGAGATAATCAGCATTTTTGTTGATATCTGC
TCCGCGATTGGAAATGCAAA

Product: transport system permease

Products: ADP; phosphate; iron dicitrate [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 364; Mature: 363

Protein sequence:

>364_residues
MGRIVTPLTRQQLMLVALGIITLITPIAATSFGAANISFMDVIQVFINKMASLTQANGMTERIVMELRLPRILLAFVAGA
GLSLAGSVLQTVTRNPLADPYLFGISSGASFGAVVMLTLFTGSGFFENAGMAANSGIFSGSGALSGLLWFSLPFGAFIGA
SLSVLIVLALSGLGLNSQVERMLLSGVATSFMFGALTSLLLYFASPQATASVLFWSLGSFAKASWSLLVLPTLVIGASLF
IILGMKRQIMALQAGDETAHTLGVNVPKLRLNMLLLCSLITAILVATCGGIGFVGLMIPHTVRMLFPGRQPILLTALVGG
LFMVWIDVLARCLLGNQELPVGIITAAIGSMFFLLILRKRRVMA

Sequences:

>Translated_364_residues
MGRIVTPLTRQQLMLVALGIITLITPIAATSFGAANISFMDVIQVFINKMASLTQANGMTERIVMELRLPRILLAFVAGA
GLSLAGSVLQTVTRNPLADPYLFGISSGASFGAVVMLTLFTGSGFFENAGMAANSGIFSGSGALSGLLWFSLPFGAFIGA
SLSVLIVLALSGLGLNSQVERMLLSGVATSFMFGALTSLLLYFASPQATASVLFWSLGSFAKASWSLLVLPTLVIGASLF
IILGMKRQIMALQAGDETAHTLGVNVPKLRLNMLLLCSLITAILVATCGGIGFVGLMIPHTVRMLFPGRQPILLTALVGG
LFMVWIDVLARCLLGNQELPVGIITAAIGSMFFLLILRKRRVMA
>Mature_363_residues
GRIVTPLTRQQLMLVALGIITLITPIAATSFGAANISFMDVIQVFINKMASLTQANGMTERIVMELRLPRILLAFVAGAG
LSLAGSVLQTVTRNPLADPYLFGISSGASFGAVVMLTLFTGSGFFENAGMAANSGIFSGSGALSGLLWFSLPFGAFIGAS
LSVLIVLALSGLGLNSQVERMLLSGVATSFMFGALTSLLLYFASPQATASVLFWSLGSFAKASWSLLVLPTLVIGASLFI
ILGMKRQIMALQAGDETAHTLGVNVPKLRLNMLLLCSLITAILVATCGGIGFVGLMIPHTVRMLFPGRQPILLTALVGGL
FMVWIDVLARCLLGNQELPVGIITAAIGSMFFLLILRKRRVMA

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0609

COG function: function code P; ABC-type Fe3+-siderophore transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790740, Length=325, Percent_Identity=35.0769230769231, Blast_Score=131, Evalue=5e-32,
Organism=Escherichia coli, GI1786347, Length=355, Percent_Identity=34.0845070422535, Blast_Score=127, Evalue=2e-30,
Organism=Escherichia coli, GI1790741, Length=305, Percent_Identity=33.7704918032787, Blast_Score=125, Evalue=5e-30,
Organism=Escherichia coli, GI1788004, Length=303, Percent_Identity=30.6930693069307, Blast_Score=98, Evalue=8e-22,
Organism=Escherichia coli, GI1786805, Length=305, Percent_Identity=31.4754098360656, Blast_Score=93, Evalue=3e-20,
Organism=Escherichia coli, GI1786804, Length=333, Percent_Identity=29.4294294294294, Blast_Score=89, Evalue=4e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000522 [H]

Pfam domain/function: PF01032 FecCD [H]

EC number: NA

Molecular weight: Translated: 38350; Mature: 38219

Theoretical pI: Translated: 11.17; Mature: 11.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRIVTPLTRQQLMLVALGIITLITPIAATSFGAANISFMDVIQVFINKMASLTQANGMT
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHH
ERIVMELRLPRILLAFVAGAGLSLAGSVLQTVTRNPLADPYLFGISSGASFGAVVMLTLF
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCEEECCCCCCHHHHHHHHHH
TGSGFFENAGMAANSGIFSGSGALSGLLWFSLPFGAFIGASLSVLIVLALSGLGLNSQVE
HCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
RMLLSGVATSFMFGALTSLLLYFASPQATASVLFWSLGSFAKASWSLLVLPTLVIGASLF
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
IILGMKRQIMALQAGDETAHTLGVNVPKLRLNMLLLCSLITAILVATCGGIGFVGLMIPH
HHHCCHHHHHHEECCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
TVRMLFPGRQPILLTALVGGLFMVWIDVLARCLLGNQELPVGIITAAIGSMFFLLILRKR
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
RVMA
HCCC
>Mature Secondary Structure 
GRIVTPLTRQQLMLVALGIITLITPIAATSFGAANISFMDVIQVFINKMASLTQANGMT
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHH
ERIVMELRLPRILLAFVAGAGLSLAGSVLQTVTRNPLADPYLFGISSGASFGAVVMLTLF
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCEEECCCCCCHHHHHHHHHH
TGSGFFENAGMAANSGIFSGSGALSGLLWFSLPFGAFIGASLSVLIVLALSGLGLNSQVE
HCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
RMLLSGVATSFMFGALTSLLLYFASPQATASVLFWSLGSFAKASWSLLVLPTLVIGASLF
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
IILGMKRQIMALQAGDETAHTLGVNVPKLRLNMLLLCSLITAILVATCGGIGFVGLMIPH
HHHCCHHHHHHEECCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
TVRMLFPGRQPILLTALVGGLFMVWIDVLARCLLGNQELPVGIITAAIGSMFFLLILRKR
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
RVMA
HCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; iron dicitrate [Periplasm]; H2O [C]

Specific reaction: ATP + iron dicitrate [Periplasm] + H2O = ADP + phosphate + iron dicitrate [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]