| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126175550
Identifier: 126175550
GI number: 126175550
Start: 3918674
End: 3919057
Strand: Reverse
Name: 126175550
Synonym: Sbal_3353
Alternate gene names: NA
Gene position: 3919057-3918674 (Counterclockwise)
Preceding gene: 126175551
Following gene: 126175548
Centisome position: 76.43
GC content: 52.08
Gene sequence:
>384_bases ATGAATACTTTACTTATTTGCCTATTTGTCGCCATGTTATTGCCGTATCTGGCGAAAGGCCCCGTCGCTTGGGCGATGGC CAAGGCGGGCGGTTATGACAATAATCATCCCCGCGCCCAGCAAGCACAGCTAACCGGTTTTGGTGCTCGCGCCTTGGCGG GGCATCAAAATGCCTTCGAGTCCCTGTTAGTGTTTGGTCTGGCGGTATTAGTGGTTATCGCCACGGGCAAAGTGAACCCC ACCACTGAGTGGTTGGCAATTACCCATGTCGCCGCCCGCTTTGTGTATCACATCCTATACCTTGCCAATAAAGGCACCCT ACGATCCCTCTCATGGTTTGTCGCTATCTTCAGCGCCTTCGGGATTTTCTTTCAGGCTTTTTAA
Upstream 100 bases:
>100_bases TCGCAGTAGCAGAGCTAAAACAGCAGAACTAAAACAGCAGAACTAAAACAGTAGAGCTTGAATAACAGAACTCGAACAAC AATCAAAGGAAGCTTAACCT
Downstream 100 bases:
>100_bases TGCTTGATATTAAAGGTTCTGGGCGAGCTTTTTAATATTTTCCCGCAGCTCATCGGGCGTATGGGCCGCATAACCCAGTA AGATCGCTTGCCTTGGATAG
Product: hypothetical protein
Products: NA
Alternate protein names: Signal Peptide
Number of amino acids: Translated: 127; Mature: 127
Protein sequence:
>127_residues MNTLLICLFVAMLLPYLAKGPVAWAMAKAGGYDNNHPRAQQAQLTGFGARALAGHQNAFESLLVFGLAVLVVIATGKVNP TTEWLAITHVAARFVYHILYLANKGTLRSLSWFVAIFSAFGIFFQAF
Sequences:
>Translated_127_residues MNTLLICLFVAMLLPYLAKGPVAWAMAKAGGYDNNHPRAQQAQLTGFGARALAGHQNAFESLLVFGLAVLVVIATGKVNP TTEWLAITHVAARFVYHILYLANKGTLRSLSWFVAIFSAFGIFFQAF >Mature_127_residues MNTLLICLFVAMLLPYLAKGPVAWAMAKAGGYDNNHPRAQQAQLTGFGARALAGHQNAFESLLVFGLAVLVVIATGKVNP TTEWLAITHVAARFVYHILYLANKGTLRSLSWFVAIFSAFGIFFQAF
Specific function: Unknown
COG id: COG3686
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13831; Mature: 13831
Theoretical pI: Translated: 10.20; Mature: 10.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTLLICLFVAMLLPYLAKGPVAWAMAKAGGYDNNHPRAQQAQLTGFGARALAGHQNAFE CCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCHHHHHHHCCCHHHHHCCHHHHH SLLVFGLAVLVVIATGKVNPTTEWLAITHVAARFVYHILYLANKGTLRSLSWFVAIFSAF HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH GIFFQAF HHHHHCC >Mature Secondary Structure MNTLLICLFVAMLLPYLAKGPVAWAMAKAGGYDNNHPRAQQAQLTGFGARALAGHQNAFE CCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCHHHHHHHCCCHHHHHCCHHHHH SLLVFGLAVLVVIATGKVNPTTEWLAITHVAARFVYHILYLANKGTLRSLSWFVAIFSAF HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH GIFFQAF HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA