| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126175486
Identifier: 126175486
GI number: 126175486
Start: 3846930
End: 3848210
Strand: Reverse
Name: 126175486
Synonym: Sbal_3286
Alternate gene names: NA
Gene position: 3848210-3846930 (Counterclockwise)
Preceding gene: 126175487
Following gene: 126175484
Centisome position: 75.05
GC content: 47.15
Gene sequence:
>1281_bases ATGAGTTCTAACATTTCTAATAACAGCTCTAACATCAGTTCGAGCATAAACACAAGTCCTGAGTTACCGTCAGGTTTTGC CGAGCAAGAACTGAGTCGTTCTATTGGCCGTAGCCGTATCAATAGTATCGATATGATGCGCGGCCTGGTGATGCTTATCA TGCTGCTCGACCATGTGCGGGAACGGTTTTTCCTGCATATGCAGGTGAGCGACCCCATGGATTTGAGTTCGACCTCTTGG GGGCTTTTTCTAAGCCGCTTTGCAGCGCATTTTTGTGCGCCAGTGTTTGTGTTTTTAACAGGGGTTTCTGCATGGCTTTA TGCCAATCGCAGTCATGGACAGCCGCGTTCAGCGCGGGCGTTTTTGATTAAACGTGGCTTATTTTTAATCGCGCTCGAAA TCTTAGTGATCAACATCTCTTGGATGGGCAACTACCATACGCTTTGGTTGCAGGTCATTTGGGTGATCGGCCTGAGTATG TTAACGCTCGCTGCGCTGATAAACCTGCCTAGACCTTGGATGGCTGTTTTAGGTTTCGCGATTGTCTTTGGTCATAATCT GTTGACGCCAATTCATTTTCAACCCAATGATTGGGCTTACGGTCTGTGGACCATATTGCACGACCGTGGATATCTGATAA GCGAAGGTGCGCTTAAGATCAAAGTGAGTTATCCCGCGCTGCCTTGGATGGGCGTGATATTGTTGGGTTATGTGGCTGGG CCCATTTTCAGTCAGAAGCCGAATGCTAACCCGCTTGAAGCTACGCAGCGCCAGCAAACACTGCTGAAGTTAGGGATAAG CTGCTGGGTACTTTTTGCGTTGCTGCGCGGGTTTAACATCTATGGCGAAACCTTGCCTTGGCAGGCGGGGGCACATTTGG GTGAAACCTTAATGTCGGTACTCAACTTAACCAAATACCCGCCATCATTAAGCTTTTTACTGGTGACCTTAGGCGGCATG TTCTTTTGCTTAGTGGCCTTTGAGCGGTATTTTGCATCAAGTGGGAAAGTAGAGGGGAGATTAGCGCGAGTCGGCCATGG GTTATCTGTGTTTGGCTCAGTCCCTATGTTCTTCTATATCTTACATTTGTACGTGTTATTACTGCTTTATAGCTTAGCGA AATTCATTTTTGATGCGAACAATGGTGAGTACTTTGGGGTGAATAGTATGGGATGGATTTGGTTCATCGCGGGCGTGTTA GCTATCGCGCTGTATTATCCCGTTAAGCGGTTTAGCGAGTATAAAAAACACAGCACTCAGGCTTGGATTAAGTACCTCTA A
Upstream 100 bases:
>100_bases AATCTGGAAAACTTATTGGATGAGCACTATATCGCCAGTAGTTATTCAGCGCTCTGGGCGGTACCCGGTGAGCCACGTAG CATTAGAGTGAGTGTCAGCT
Downstream 100 bases:
>100_bases ATTTAAGTGCTTCTAAATCTAAGCGCCTCTAAATCTAAGCACTTCTAAACTTGAGTCATGTCGCTTTAAAGGAAAAGTCG CCAAGCATAAGCGCTTGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 426; Mature: 425
Protein sequence:
>426_residues MSSNISNNSSNISSSINTSPELPSGFAEQELSRSIGRSRINSIDMMRGLVMLIMLLDHVRERFFLHMQVSDPMDLSSTSW GLFLSRFAAHFCAPVFVFLTGVSAWLYANRSHGQPRSARAFLIKRGLFLIALEILVINISWMGNYHTLWLQVIWVIGLSM LTLAALINLPRPWMAVLGFAIVFGHNLLTPIHFQPNDWAYGLWTILHDRGYLISEGALKIKVSYPALPWMGVILLGYVAG PIFSQKPNANPLEATQRQQTLLKLGISCWVLFALLRGFNIYGETLPWQAGAHLGETLMSVLNLTKYPPSLSFLLVTLGGM FFCLVAFERYFASSGKVEGRLARVGHGLSVFGSVPMFFYILHLYVLLLLYSLAKFIFDANNGEYFGVNSMGWIWFIAGVL AIALYYPVKRFSEYKKHSTQAWIKYL
Sequences:
>Translated_426_residues MSSNISNNSSNISSSINTSPELPSGFAEQELSRSIGRSRINSIDMMRGLVMLIMLLDHVRERFFLHMQVSDPMDLSSTSW GLFLSRFAAHFCAPVFVFLTGVSAWLYANRSHGQPRSARAFLIKRGLFLIALEILVINISWMGNYHTLWLQVIWVIGLSM LTLAALINLPRPWMAVLGFAIVFGHNLLTPIHFQPNDWAYGLWTILHDRGYLISEGALKIKVSYPALPWMGVILLGYVAG PIFSQKPNANPLEATQRQQTLLKLGISCWVLFALLRGFNIYGETLPWQAGAHLGETLMSVLNLTKYPPSLSFLLVTLGGM FFCLVAFERYFASSGKVEGRLARVGHGLSVFGSVPMFFYILHLYVLLLLYSLAKFIFDANNGEYFGVNSMGWIWFIAGVL AIALYYPVKRFSEYKKHSTQAWIKYL >Mature_425_residues SSNISNNSSNISSSINTSPELPSGFAEQELSRSIGRSRINSIDMMRGLVMLIMLLDHVRERFFLHMQVSDPMDLSSTSWG LFLSRFAAHFCAPVFVFLTGVSAWLYANRSHGQPRSARAFLIKRGLFLIALEILVINISWMGNYHTLWLQVIWVIGLSML TLAALINLPRPWMAVLGFAIVFGHNLLTPIHFQPNDWAYGLWTILHDRGYLISEGALKIKVSYPALPWMGVILLGYVAGP IFSQKPNANPLEATQRQQTLLKLGISCWVLFALLRGFNIYGETLPWQAGAHLGETLMSVLNLTKYPPSLSFLLVTLGGMF FCLVAFERYFASSGKVEGRLARVGHGLSVFGSVPMFFYILHLYVLLLLYSLAKFIFDANNGEYFGVNSMGWIWFIAGVLA IALYYPVKRFSEYKKHSTQAWIKYL
Specific function: Unknown
COG id: COG3503
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48002; Mature: 47871
Theoretical pI: Translated: 9.83; Mature: 9.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSNISNNSSNISSSINTSPELPSGFAEQELSRSIGRSRINSIDMMRGLVMLIMLLDHVR CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ERFFLHMQVSDPMDLSSTSWGLFLSRFAAHFCAPVFVFLTGVSAWLYANRSHGQPRSARA HHHEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHH FLIKRGLFLIALEILVINISWMGNYHTLWLQVIWVIGLSMLTLAALINLPRPWMAVLGFA HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH IVFGHNLLTPIHFQPNDWAYGLWTILHDRGYLISEGALKIKVSYPALPWMGVILLGYVAG HHHHCCCCCCEEECCCCCHHHHHHHHHCCCCEEECCCEEEEEECCCCHHHHHHHHHHHHC PIFSQKPNANPLEATQRQQTLLKLGISCWVLFALLRGFNIYGETLPWQAGAHLGETLMSV CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCHHHHHHHHHH LNLTKYPPSLSFLLVTLGGMFFCLVAFERYFASSGKVEGRLARVGHGLSVFGSVPMFFYI HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHHHH LHLYVLLLLYSLAKFIFDANNGEYFGVNSMGWIWFIAGVLAIALYYPVKRFSEYKKHSTQ HHHHHHHHHHHHHHHHEECCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AWIKYL HHHHCC >Mature Secondary Structure SSNISNNSSNISSSINTSPELPSGFAEQELSRSIGRSRINSIDMMRGLVMLIMLLDHVR CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ERFFLHMQVSDPMDLSSTSWGLFLSRFAAHFCAPVFVFLTGVSAWLYANRSHGQPRSARA HHHEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHH FLIKRGLFLIALEILVINISWMGNYHTLWLQVIWVIGLSMLTLAALINLPRPWMAVLGFA HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH IVFGHNLLTPIHFQPNDWAYGLWTILHDRGYLISEGALKIKVSYPALPWMGVILLGYVAG HHHHCCCCCCEEECCCCCHHHHHHHHHCCCCEEECCCEEEEEECCCCHHHHHHHHHHHHC PIFSQKPNANPLEATQRQQTLLKLGISCWVLFALLRGFNIYGETLPWQAGAHLGETLMSV CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCHHHHHHHHHH LNLTKYPPSLSFLLVTLGGMFFCLVAFERYFASSGKVEGRLARVGHGLSVFGSVPMFFYI HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHHHH LHLYVLLLLYSLAKFIFDANNGEYFGVNSMGWIWFIAGVLAIALYYPVKRFSEYKKHSTQ HHHHHHHHHHHHHHHHEECCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AWIKYL HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA