| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126175466
Identifier: 126175466
GI number: 126175466
Start: 3828511
End: 3829014
Strand: Direct
Name: 126175466
Synonym: Sbal_3266
Alternate gene names: NA
Gene position: 3828511-3829014 (Clockwise)
Preceding gene: 126175465
Following gene: 126175467
Centisome position: 74.67
GC content: 46.83
Gene sequence:
>504_bases ATGTGTTACCCAATCAATAAACAAGATGCGGCTGGCTTTACCTTGATAGAACTGGTCGTGGTGATTATTGTACTTGGGAT CTTGGCAGTGATTGCCGCGCCTAAATTTATCGGTTTGAGTAAAGAGGCTCGGCTACAAACCCTGAGCCAATTACAGGCCA GCGTAAAAACCGCCAACACACTGGCCTACTCCAAAACGCAAATGCCCAGCCTGCGAAGCCAAGCCGTTGCAGGCCGCGAC GATATTATTGATATCGACCTCAATGGTGATGGCACGCCCGATACCAGATTGAAATGGGGTTACCTCGATAATACCGATGT GGAAAACTGGATCACCTCAGATGATAAGCTCATCATTCAATATCAAGGCGTTGATATCACTTACATAGGTTACGATCTTA ACAACAATACCTTAGTAGATGACGATCAATGCTATTTCCGCTACACCCAAGCCAGCGATGCCAACACCCCGCCGCTATAT GATATCAACGCCCAAGGTTGTTAG
Upstream 100 bases:
>100_bases TGGTTCGCAAAATTAGGTCAAACACCCCTGCTGCTACTCTCTGGATTACTGGTATTACTCGGCTTTGGCCGACGTGTAAA AGCGCAATAGGATCAAGACC
Downstream 100 bases:
>100_bases GCTGACACTCAGTTAACCTGTGTTATCCCGCAATTGTCTGCGAATAGATTAGGCTGATTGCGCGTTCCACGTTAAGGTGA ACGATTAGACGTGGCCTTAT
Product: methylation site containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 167; Mature: 167
Protein sequence:
>167_residues MCYPINKQDAAGFTLIELVVVIIVLGILAVIAAPKFIGLSKEARLQTLSQLQASVKTANTLAYSKTQMPSLRSQAVAGRD DIIDIDLNGDGTPDTRLKWGYLDNTDVENWITSDDKLIIQYQGVDITYIGYDLNNNTLVDDDQCYFRYTQASDANTPPLY DINAQGC
Sequences:
>Translated_167_residues MCYPINKQDAAGFTLIELVVVIIVLGILAVIAAPKFIGLSKEARLQTLSQLQASVKTANTLAYSKTQMPSLRSQAVAGRD DIIDIDLNGDGTPDTRLKWGYLDNTDVENWITSDDKLIIQYQGVDITYIGYDLNNNTLVDDDQCYFRYTQASDANTPPLY DINAQGC >Mature_167_residues MCYPINKQDAAGFTLIELVVVIIVLGILAVIAAPKFIGLSKEARLQTLSQLQASVKTANTLAYSKTQMPSLRSQAVAGRD DIIDIDLNGDGTPDTRLKWGYLDNTDVENWITSDDKLIIQYQGVDITYIGYDLNNNTLVDDDQCYFRYTQASDANTPPLY DINAQGC
Specific function: Unknown
COG id: COG2165
COG function: function code NU; Type II secretory pathway, pseudopilin PulG
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18445; Mature: 18445
Theoretical pI: Translated: 4.08; Mature: 4.08
Prosite motif: PS00409 PROKAR_NTER_METHYL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCYPINKQDAAGFTLIELVVVIIVLGILAVIAAPKFIGLSKEARLQTLSQLQASVKTANT CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHHHHHHH LAYSKTQMPSLRSQAVAGRDDIIDIDLNGDGTPDTRLKWGYLDNTDVENWITSDDKLIIQ HEECCCCCCCHHHHHCCCCCCEEEEEECCCCCCCCEEEECCCCCCCCHHHCCCCCEEEEE YQGVDITYIGYDLNNNTLVDDDQCYFRYTQASDANTPPLYDINAQGC ECCCEEEEEEEECCCCEEECCCCEEEEEEECCCCCCCCEEECCCCCC >Mature Secondary Structure MCYPINKQDAAGFTLIELVVVIIVLGILAVIAAPKFIGLSKEARLQTLSQLQASVKTANT CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHHHHHHH LAYSKTQMPSLRSQAVAGRDDIIDIDLNGDGTPDTRLKWGYLDNTDVENWITSDDKLIIQ HEECCCCCCCHHHHHCCCCCCEEEEEECCCCCCCCEEEECCCCCCCCHHHCCCCCEEEEE YQGVDITYIGYDLNNNTLVDDDQCYFRYTQASDANTPPLYDINAQGC ECCCEEEEEEEECCCCEEECCCCEEEEEEECCCCCCCCEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA