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The map label for this gene is rimP

Identifier: 126175441

GI number: 126175441

Start: 3801127

End: 3801582

Strand: Reverse

Name: rimP

Synonym: Sbal_3241

Alternate gene names: 126175441

Gene position: 3801582-3801127 (Counterclockwise)

Preceding gene: 126175442

Following gene: 126175440

Centisome position: 74.14

GC content: 44.74

Gene sequence:

>456_bases
TTGGCAACGTTAGAATTCAGACTGGCAGAAATGCTCAAAGTACCTGTGGAAGCATTAGGCTTTCAGCTATGGGGCATTGA
ATATGTTCAAGCGGGTAAGCATTCCACACTGCGAGTGTTCATTGATGGTGAGAATGGTATCAATATTGAAGATTGTGCCA
ATGCAAGTCGCCAAGTCAGTGCTGTACTCGATGTTGAAGATCCTATTTCTACAGAATATACCCTAGAGGTTTCTTCGCCA
GGCGTTGATAGACCCTTATTTACTGCTGAGCAGTATGCGGGCTATGTGGGCGAGGATGTAAAGCTTCAATTGACTATGCC
GGTTGACGGCAGTCGTAATTTAAAAGGCGCCATCACTGCGGTCGACGGGCAAATGCTCTCACTGAAAGTGAATGGTAAAG
AGTTAGTTGTCGCATTGGATAATATCCGCAAAGGCAACTTAATCGCTAAGTTTTGA

Upstream 100 bases:

>100_bases
GGGTTTTTTGTTATCTGGGACTTTTAAATTTGTCGCATGCTTCGTATGTGGCGTTGTACTAGGGCTATTAAGCCCTTTTT
TGTTTTTTCGGGGGTCAATC

Downstream 100 bases:

>100_bases
TGGTTTCAAGGTGAACGAGGCAAGACGAGATGAATAAAGAGATTCTGCTAGTCGCTGAGGCGGTTTCAAATGAAAAGGCC
GTTCCACGCGAGAAAATTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 151; Mature: 150

Protein sequence:

>151_residues
MATLEFRLAEMLKVPVEALGFQLWGIEYVQAGKHSTLRVFIDGENGINIEDCANASRQVSAVLDVEDPISTEYTLEVSSP
GVDRPLFTAEQYAGYVGEDVKLQLTMPVDGSRNLKGAITAVDGQMLSLKVNGKELVVALDNIRKGNLIAKF

Sequences:

>Translated_151_residues
MATLEFRLAEMLKVPVEALGFQLWGIEYVQAGKHSTLRVFIDGENGINIEDCANASRQVSAVLDVEDPISTEYTLEVSSP
GVDRPLFTAEQYAGYVGEDVKLQLTMPVDGSRNLKGAITAVDGQMLSLKVNGKELVVALDNIRKGNLIAKF
>Mature_150_residues
ATLEFRLAEMLKVPVEALGFQLWGIEYVQAGKHSTLRVFIDGENGINIEDCANASRQVSAVLDVEDPISTEYTLEVSSPG
VDRPLFTAEQYAGYVGEDVKLQLTMPVDGSRNLKGAITAVDGQMLSLKVNGKELVVALDNIRKGNLIAKF

Specific function: Required for maturation of 30S ribosomal subunits

COG id: COG0779

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rimP family

Homologues:

Organism=Escherichia coli, GI226510978, Length=151, Percent_Identity=60.2649006622517, Blast_Score=190, Evalue=3e-50,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RIMP_SHEB2 (B8E6N0)

Other databases:

- EMBL:   CP001252
- RefSeq:   YP_002357064.1
- ProteinModelPortal:   B8E6N0
- SMR:   B8E6N0
- GeneID:   7087579
- GenomeReviews:   CP001252_GR
- KEGG:   sbp:Sbal223_1126
- HOGENOM:   HBG668072
- OMA:   VMDVEDP
- ProtClustDB:   PRK00092
- GO:   GO:0005737
- HAMAP:   MF_01077
- InterPro:   IPR003728

Pfam domain/function: PF02576 DUF150

EC number: NA

Molecular weight: Translated: 16444; Mature: 16313

Theoretical pI: Translated: 4.43; Mature: 4.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATLEFRLAEMLKVPVEALGFQLWGIEYVQAGKHSTLRVFIDGENGINIEDCANASRQVS
CCCHHHHHHHHHHCCHHHCCEEEECEEEEECCCCCEEEEEEECCCCCCHHHHCCCCCEEE
AVLDVEDPISTEYTLEVSSPGVDRPLFTAEQYAGYVGEDVKLQLTMPVDGSRNLKGAITA
EEEECCCCCCCEEEEEECCCCCCCCCCCHHHHCCCCCCCEEEEEEECCCCCCCCCEEEEE
VDGQMLSLKVNGKELVVALDNIRKGNLIAKF
ECCEEEEEEECCCEEEEEECCCCCCCEEEEC
>Mature Secondary Structure 
ATLEFRLAEMLKVPVEALGFQLWGIEYVQAGKHSTLRVFIDGENGINIEDCANASRQVS
CCHHHHHHHHHHCCHHHCCEEEECEEEEECCCCCEEEEEEECCCCCCHHHHCCCCCEEE
AVLDVEDPISTEYTLEVSSPGVDRPLFTAEQYAGYVGEDVKLQLTMPVDGSRNLKGAITA
EEEECCCCCCCEEEEEECCCCCCCCCCCHHHHCCCCCCCEEEEEEECCCCCCCCCEEEEE
VDGQMLSLKVNGKELVVALDNIRKGNLIAKF
ECCEEEEEEECCCEEEEEECCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA