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The map label for this gene is torT [H]

Identifier: 126175416

GI number: 126175416

Start: 3769184

End: 3770275

Strand: Direct

Name: torT [H]

Synonym: Sbal_3216

Alternate gene names: 126175416

Gene position: 3769184-3770275 (Clockwise)

Preceding gene: 126175414

Following gene: 126175418

Centisome position: 73.51

GC content: 46.52

Gene sequence:

>1092_bases
ATGATGCGAAAATATTGGCAACGATTGTTCACACTCGCCACATTTGGCCTCGTGTTTTCAGGCTATGCGACAAGTGAACC
CCACACTTGGCCATTAGAGCAGCGCACGCCATTCAATGTCAAAATCCAGCAATCCCAAACATTAAACTACTTACCGCTGA
CAAAAGCTCAAAAGCCTTGGCGGATCTGCGCCCTAGTGCCACACCTTAAAGATGCCTACTGGATTGGCATTGATTATGGA
CTGATCCAACATGCCAAAACCCTTGGCGTCTCACTCGATCTCTTCGAAGCAGGCAGTTATTACCATAAAGATAAACAACT
GGCCCAGCTGCAAAACTGTATGCAAGGCGACTATGATGCCATCTTGCTTGGCTCAGTCAGCCCAGATTTACTCGCCCAAT
TTACAACACAGCTCACTAAACCAGTGTTAGCCCTAGTCAACAAACTCAATAGCGACCGAGTCCAAACCCATATTGGCGTG
AACTGGTATCAGATGGGGCTACTGGCGGGTAACTTCATCAAAGCCGATGCTGCATCACAACATCCACATCAAACGGCAAA
TTTGGCACTCTTGGCCGGACCAGAAAACGTAGGTGGCACAGATTTAGTTGAGCAAGGTATACGTCAGGCGCTTGAAGGGA
GCCAAGTCAAGATTAGTGCCATTCAGCACGCCGATAATAATCGCAATTTGTATCGTGACCAGTTGCAGATGCTGCTTAAA
TCTCAGCAGCCAGATTATATTCTCGGCAGCGCAGTGGCGATTGAAGCCGCCATTAGTACTTTGAAACAAAAGGGATTAAG
TAACAGAGTCAAGCTAGTAAGCAGTTACTTGTCCCCCGCCATTTTGCGTGGGCTAAAACGGGAAAAAGTCATCTACAGCA
ATGATGATTTAGTCGTGTTACAGGGAAAACTCGCAATTGATGTCACAGTGAAACAACTCGAAGGCGCTAAGATATTTGGC
GATATAGGACCAGCGATCATCAAGCGAACATCATCCTCTAACACTTTGTCCCAATTAGATTTCAGCCTAGCTGAAGCCGA
CTTTTACCCTCTGTACCAAGTGCGACCTAACTCCATTAATCGTCCACTTTAG

Upstream 100 bases:

>100_bases
TCGACCGGTTAAACTGGTTAGCGATAAAGATAAAGGAGCCACACATCTTCCTTAAACTGTTACAATGCCACCCAAGATTA
TGCTTAGCGGATAATACGGG

Downstream 100 bases:

>100_bases
CGGCAAATAAATAGCCTTCGCCATGAATAGTGACAAACAATTCAGTGTCGAGTTTATTGCGAAGGCGGCGAATGATCACA
TCGATCGTTCTGTCATTGAC

Product: TMAO reductase system periplasmic protein TorT

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 363; Mature: 363

Protein sequence:

>363_residues
MMRKYWQRLFTLATFGLVFSGYATSEPHTWPLEQRTPFNVKIQQSQTLNYLPLTKAQKPWRICALVPHLKDAYWIGIDYG
LIQHAKTLGVSLDLFEAGSYYHKDKQLAQLQNCMQGDYDAILLGSVSPDLLAQFTTQLTKPVLALVNKLNSDRVQTHIGV
NWYQMGLLAGNFIKADAASQHPHQTANLALLAGPENVGGTDLVEQGIRQALEGSQVKISAIQHADNNRNLYRDQLQMLLK
SQQPDYILGSAVAIEAAISTLKQKGLSNRVKLVSSYLSPAILRGLKREKVIYSNDDLVVLQGKLAIDVTVKQLEGAKIFG
DIGPAIIKRTSSSNTLSQLDFSLAEADFYPLYQVRPNSINRPL

Sequences:

>Translated_363_residues
MMRKYWQRLFTLATFGLVFSGYATSEPHTWPLEQRTPFNVKIQQSQTLNYLPLTKAQKPWRICALVPHLKDAYWIGIDYG
LIQHAKTLGVSLDLFEAGSYYHKDKQLAQLQNCMQGDYDAILLGSVSPDLLAQFTTQLTKPVLALVNKLNSDRVQTHIGV
NWYQMGLLAGNFIKADAASQHPHQTANLALLAGPENVGGTDLVEQGIRQALEGSQVKISAIQHADNNRNLYRDQLQMLLK
SQQPDYILGSAVAIEAAISTLKQKGLSNRVKLVSSYLSPAILRGLKREKVIYSNDDLVVLQGKLAIDVTVKQLEGAKIFG
DIGPAIIKRTSSSNTLSQLDFSLAEADFYPLYQVRPNSINRPL
>Mature_363_residues
MMRKYWQRLFTLATFGLVFSGYATSEPHTWPLEQRTPFNVKIQQSQTLNYLPLTKAQKPWRICALVPHLKDAYWIGIDYG
LIQHAKTLGVSLDLFEAGSYYHKDKQLAQLQNCMQGDYDAILLGSVSPDLLAQFTTQLTKPVLALVNKLNSDRVQTHIGV
NWYQMGLLAGNFIKADAASQHPHQTANLALLAGPENVGGTDLVEQGIRQALEGSQVKISAIQHADNNRNLYRDQLQMLLK
SQQPDYILGSAVAIEAAISTLKQKGLSNRVKLVSSYLSPAILRGLKREKVIYSNDDLVVLQGKLAIDVTVKQLEGAKIFG
DIGPAIIKRTSSSNTLSQLDFSLAEADFYPLYQVRPNSINRPL

Specific function: Upon binding a putative inducer it probably interacts with torS and allows it to play a role in the induction of the torCAD operon for trimethylamine N-oxide reductase [H]

COG id: COG1879

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 2 family [H]

Homologues:

Organism=Escherichia coli, GI1787228, Length=302, Percent_Identity=35.4304635761589, Blast_Score=183, Evalue=2e-47,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001761
- InterPro:   IPR014301 [H]

Pfam domain/function: PF00532 Peripla_BP_1 [H]

EC number: NA

Molecular weight: Translated: 40392; Mature: 40392

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMRKYWQRLFTLATFGLVFSGYATSEPHTWPLEQRTPFNVKIQQSQTLNYLPLTKAQKPW
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCC
RICALVPHLKDAYWIGIDYGLIQHAKTLGVSLDLFEAGSYYHKDKQLAQLQNCMQGDYDA
EEEEECCCCCCEEEEEECHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCE
ILLGSVSPDLLAQFTTQLTKPVLALVNKLNSDRVQTHIGVNWYQMGLLAGNFIKADAASQ
EEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHCCCEECCCCCC
HPHQTANLALLAGPENVGGTDLVEQGIRQALEGSQVKISAIQHADNNRNLYRDQLQMLLK
CCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHH
SQQPDYILGSAVAIEAAISTLKQKGLSNRVKLVSSYLSPAILRGLKREKVIYSNDDLVVL
CCCCCEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCHHHHHCCCCCCEEECCCCEEEE
QGKLAIDVTVKQLEGAKIFGDIGPAIIKRTSSSNTLSQLDFSLAEADFYPLYQVRPNSIN
ECCEEEEEEEEHHCCCEEECCCCHHHHEECCCCCHHHHHHHHHHHCCCCEEEEECCCCCC
RPL
CCC
>Mature Secondary Structure
MMRKYWQRLFTLATFGLVFSGYATSEPHTWPLEQRTPFNVKIQQSQTLNYLPLTKAQKPW
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCC
RICALVPHLKDAYWIGIDYGLIQHAKTLGVSLDLFEAGSYYHKDKQLAQLQNCMQGDYDA
EEEEECCCCCCEEEEEECHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCE
ILLGSVSPDLLAQFTTQLTKPVLALVNKLNSDRVQTHIGVNWYQMGLLAGNFIKADAASQ
EEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHCCCEECCCCCC
HPHQTANLALLAGPENVGGTDLVEQGIRQALEGSQVKISAIQHADNNRNLYRDQLQMLLK
CCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHH
SQQPDYILGSAVAIEAAISTLKQKGLSNRVKLVSSYLSPAILRGLKREKVIYSNDDLVVL
CCCCCEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCHHHHHCCCCCCEEECCCCEEEE
QGKLAIDVTVKQLEGAKIFGDIGPAIIKRTSSSNTLSQLDFSLAEADFYPLYQVRPNSIN
ECCEEEEEEEEHHCCCEEECCCCHHHHEECCCCCHHHHHHHHHHHCCCCEEEEECCCCCC
RPL
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]