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The map label for this gene is yhbU [H]

Identifier: 126175403

GI number: 126175403

Start: 3749086

End: 3750096

Strand: Direct

Name: yhbU [H]

Synonym: Sbal_3202

Alternate gene names: 126175403

Gene position: 3749086-3750096 (Clockwise)

Preceding gene: 126175401

Following gene: 126175404

Centisome position: 73.12

GC content: 50.45

Gene sequence:

>1011_bases
ATGGAGCTGTTGTGTCCAGCAGGAAATCTGGCCTCGCTAAAGTCGGCATTGCATGCCGGAGCCGACGCTGTGTATCTAGG
ACTGAAAGACGACACCAACGCGCGCTCATTTGCAGGATTAAACTTCACCCCCGCAAAGTTGCAAGAAGCCACTGAGCTCA
CGCAAAAATACGGTAAGAAAATCTTTTTAACCTTAAATACCTTTCCAAAACCGGGCGAAGAACACCGTTGGTATCAGGCC
ATCGATCTCGCCGCGAAGCTGGGTATCGATGCGTTGATTGTCGCCGATCTTTCTTTGCTCGATTATGCCCATCAACATTA
TCCACACTTGCCGCTGCATTTGTCGGTACAGGCCAGTGCGACCAATCTGGGCGCGCTCAGCTTTTATAAAGAAGCTTTTA
ATATCGCCCGAGTCGTGTTACCACGGGTGTTATCCATGAAACAAGTGCGTGACCTTGCCAAAGTCAGCCCAGTGGATTTA
GAAGTGTTCGCCTTCGGCAGTCTATGCATCATGGCCGAAGGGCGTTGCCAGCTGTCATCCTATGTGACGGGTCAATCGCC
CAACACGGGCGGCTCTTGTTCACCGGCAAAACACGTGCGCTGGCAGGAAGAAGGACAGAACCGATTAACGCTGCTCAACG
ATGTATTGATTGATAAATCAGCCCTCGATGAACAGATGGGTTATCCCGTGGTATGTAAAGGCCGTTACATCACGGAAGAT
CAAGATTCGCCGCAGTATTTGCTCGAATCACCGACCAGTTTGAATACTTTAAGCCTACTGCCCGAACTCGCTAAGGCAGG
CATAGTGTCGTTGAAAATCGAAGGCCGCCAACGCAGCCCAGCCTATGTTGAGCAAGTCACGAGAGTTTGGCGTCAAGCCA
TAGACACCTATCTGGATAACCCAGAACTGTACTCAACAAGCCAAAACCAACCCCATTGGGAACAAGCCCTTGCAAAAGTT
TCCGAGGGTCAAATCACTACACTTGGCGCCTACGAGCGTGATTGGCAATAA

Upstream 100 bases:

>100_bases
GTTTATCGGGATTTTATGATCTTAAACCTGTTTTAAATCAATTCATCGCCATTCAATCTTACCTACACTCAGCGGCTATC
ATTTTATCGGGAGCATCACT

Downstream 100 bases:

>100_bases
AGGTTAATGAACAAAGCGCCAGATTAACAAAGGACAAGCTATGCATATTTCCCTAGGCCCGCTGTTGTATTGCTGGCAAA
AACAACAGGTCACTGATTTT

Product: peptidase U32

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 336; Mature: 336

Protein sequence:

>336_residues
MELLCPAGNLASLKSALHAGADAVYLGLKDDTNARSFAGLNFTPAKLQEATELTQKYGKKIFLTLNTFPKPGEEHRWYQA
IDLAAKLGIDALIVADLSLLDYAHQHYPHLPLHLSVQASATNLGALSFYKEAFNIARVVLPRVLSMKQVRDLAKVSPVDL
EVFAFGSLCIMAEGRCQLSSYVTGQSPNTGGSCSPAKHVRWQEEGQNRLTLLNDVLIDKSALDEQMGYPVVCKGRYITED
QDSPQYLLESPTSLNTLSLLPELAKAGIVSLKIEGRQRSPAYVEQVTRVWRQAIDTYLDNPELYSTSQNQPHWEQALAKV
SEGQITTLGAYERDWQ

Sequences:

>Translated_336_residues
MELLCPAGNLASLKSALHAGADAVYLGLKDDTNARSFAGLNFTPAKLQEATELTQKYGKKIFLTLNTFPKPGEEHRWYQA
IDLAAKLGIDALIVADLSLLDYAHQHYPHLPLHLSVQASATNLGALSFYKEAFNIARVVLPRVLSMKQVRDLAKVSPVDL
EVFAFGSLCIMAEGRCQLSSYVTGQSPNTGGSCSPAKHVRWQEEGQNRLTLLNDVLIDKSALDEQMGYPVVCKGRYITED
QDSPQYLLESPTSLNTLSLLPELAKAGIVSLKIEGRQRSPAYVEQVTRVWRQAIDTYLDNPELYSTSQNQPHWEQALAKV
SEGQITTLGAYERDWQ
>Mature_336_residues
MELLCPAGNLASLKSALHAGADAVYLGLKDDTNARSFAGLNFTPAKLQEATELTQKYGKKIFLTLNTFPKPGEEHRWYQA
IDLAAKLGIDALIVADLSLLDYAHQHYPHLPLHLSVQASATNLGALSFYKEAFNIARVVLPRVLSMKQVRDLAKVSPVDL
EVFAFGSLCIMAEGRCQLSSYVTGQSPNTGGSCSPAKHVRWQEEGQNRLTLLNDVLIDKSALDEQMGYPVVCKGRYITED
QDSPQYLLESPTSLNTLSLLPELAKAGIVSLKIEGRQRSPAYVEQVTRVWRQAIDTYLDNPELYSTSQNQPHWEQALAKV
SEGQITTLGAYERDWQ

Specific function: Unknown

COG id: COG0826

COG function: function code O; Collagenase and related proteases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase U32 family [H]

Homologues:

Organism=Escherichia coli, GI1789548, Length=336, Percent_Identity=59.8214285714286, Blast_Score=412, Evalue=1e-116,
Organism=Escherichia coli, GI1788397, Length=321, Percent_Identity=30.8411214953271, Blast_Score=139, Evalue=4e-34,
Organism=Escherichia coli, GI87081910, Length=302, Percent_Identity=29.4701986754967, Blast_Score=112, Evalue=5e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001539 [H]

Pfam domain/function: PF01136 Peptidase_U32 [H]

EC number: 3.4.-.- [C]

Molecular weight: Translated: 37194; Mature: 37194

Theoretical pI: Translated: 6.10; Mature: 6.10

Prosite motif: PS01276 PEPTIDASE_U32

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELLCPAGNLASLKSALHAGADAVYLGLKDDTNARSFAGLNFTPAKLQEATELTQKYGKK
CCEECCCCCHHHHHHHHHCCCCEEEEECCCCCCCCEECCCCCCHHHHHHHHHHHHHCCCE
IFLTLNTFPKPGEEHRWYQAIDLAAKLGIDALIVADLSLLDYAHQHYPHLPLHLSVQASA
EEEEEECCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECC
TNLGALSFYKEAFNIARVVLPRVLSMKQVRDLAKVSPVDLEVFAFGSLCIMAEGRCQLSS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCEEEEECCCEEHHH
YVTGQSPNTGGSCSPAKHVRWQEEGQNRLTLLNDVLIDKSALDEQMGYPVVCKGRYITED
EECCCCCCCCCCCCHHHCCCCHHCCCCHHHHHHHHHHCHHHHHHHCCCCEEECCCEECCC
QDSPQYLLESPTSLNTLSLLPELAKAGIVSLKIEGRQRSPAYVEQVTRVWRQAIDTYLDN
CCCCHHHHCCCCCCHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCC
PELYSTSQNQPHWEQALAKVSEGQITTLGAYERDWQ
CCEECCCCCCCHHHHHHHHHCCCCEEEECCCCCCCC
>Mature Secondary Structure
MELLCPAGNLASLKSALHAGADAVYLGLKDDTNARSFAGLNFTPAKLQEATELTQKYGKK
CCEECCCCCHHHHHHHHHCCCCEEEEECCCCCCCCEECCCCCCHHHHHHHHHHHHHCCCE
IFLTLNTFPKPGEEHRWYQAIDLAAKLGIDALIVADLSLLDYAHQHYPHLPLHLSVQASA
EEEEEECCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECC
TNLGALSFYKEAFNIARVVLPRVLSMKQVRDLAKVSPVDLEVFAFGSLCIMAEGRCQLSS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCEEEEECCCEEHHH
YVTGQSPNTGGSCSPAKHVRWQEEGQNRLTLLNDVLIDKSALDEQMGYPVVCKGRYITED
EECCCCCCCCCCCCHHHCCCCHHCCCCHHHHHHHHHHCHHHHHHHCCCCEEECCCEECCC
QDSPQYLLESPTSLNTLSLLPELAKAGIVSLKIEGRQRSPAYVEQVTRVWRQAIDTYLDN
CCCCHHHHCCCCCCHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCC
PELYSTSQNQPHWEQALAKVSEGQITTLGAYERDWQ
CCEECCCCCCCHHHHHHHHHCCCCEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]