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The map label for this gene is glbN [H]

Identifier: 126175378

GI number: 126175378

Start: 3719784

End: 3720260

Strand: Reverse

Name: glbN [H]

Synonym: Sbal_3177

Alternate gene names: 126175378

Gene position: 3720260-3719784 (Counterclockwise)

Preceding gene: 126175379

Following gene: 126175375

Centisome position: 72.56

GC content: 45.7

Gene sequence:

>477_bases
ATGAGTCGTTTATTGCTGAAGCTATTGCCTGTCGCCGCTTTGTTTTTTTTCACTGGCTGCGCAGTGCAAACGGCTGAATC
ATCGGCGCCACAGGTTAACTTAAATAATGGCAACTCAAGCCAGCAAACCTTATATCAAGAGTTAGGTGGTGAAGCTGGTT
TATCAGCGATTGTCGATGGCTTACTTGCCCGTATAGCAACCGATCCACGCATAGTGCATCACTTCCAAGAGACGGATATT
GCGTTATTTCGTGAGCGCGCCATTGAGCATTTTTGTCTGGTTGCTGATGGCGGTTGTGTGTATCACGGTGAAAATATGGC
ACTGAGTCATCAAGGGTTGAATATTACTCAGGCGGATTTTGATGCCTTAGTGGGCCATTTAATTGAATCGATGAAGGAGC
AACACATACCATTATCGACCCGCAATGCCCTCCTAAATCGTCTCGCACCTATGTATTCGGACATTACCTATCATTAG

Upstream 100 bases:

>100_bases
TCAATAAGCATCTTTCCGTGGTCACGGCTTATGCGAATTTAGGCAGTATTGCGGGTTTTGCCGATCAGCAAGGTTGGTAT
GTGTCGGTGGAGGGAACACT

Downstream 100 bases:

>100_bases
AGGTGTTGTCACTTTGATGGCTAAAATAGTGAATTTCAGATGCTGCTCTCGTGATTGATAGCAGCATTTTTTATGGGTGC
TAGAGCAAGAGCGCTTCATC

Product: globin

Products: NA

Alternate protein names: Truncated Hb; Cyanoglobin [H]

Number of amino acids: Translated: 158; Mature: 157

Protein sequence:

>158_residues
MSRLLLKLLPVAALFFFTGCAVQTAESSAPQVNLNNGNSSQQTLYQELGGEAGLSAIVDGLLARIATDPRIVHHFQETDI
ALFRERAIEHFCLVADGGCVYHGENMALSHQGLNITQADFDALVGHLIESMKEQHIPLSTRNALLNRLAPMYSDITYH

Sequences:

>Translated_158_residues
MSRLLLKLLPVAALFFFTGCAVQTAESSAPQVNLNNGNSSQQTLYQELGGEAGLSAIVDGLLARIATDPRIVHHFQETDI
ALFRERAIEHFCLVADGGCVYHGENMALSHQGLNITQADFDALVGHLIESMKEQHIPLSTRNALLNRLAPMYSDITYH
>Mature_157_residues
SRLLLKLLPVAALFFFTGCAVQTAESSAPQVNLNNGNSSQQTLYQELGGEAGLSAIVDGLLARIATDPRIVHHFQETDIA
LFRERAIEHFCLVADGGCVYHGENMALSHQGLNITQADFDALVGHLIESMKEQHIPLSTRNALLNRLAPMYSDITYH

Specific function: Unknown

COG id: COG2346

COG function: function code R; Truncated hemoglobins

Gene ontology:

Cell location: Membrane; Peripheral membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the truncated hemoglobin family. Group I subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012292
- InterPro:   IPR009050
- InterPro:   IPR019795
- InterPro:   IPR001486
- InterPro:   IPR016339 [H]

Pfam domain/function: PF01152 Bac_globin [H]

EC number: NA

Molecular weight: Translated: 17318; Mature: 17187

Theoretical pI: Translated: 5.78; Mature: 5.78

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRLLLKLLPVAALFFFTGCAVQTAESSAPQVNLNNGNSSQQTLYQELGGEAGLSAIVDG
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHCCCCCHHHHHHH
LLARIATDPRIVHHFQETDIALFRERAIEHFCLVADGGCVYHGENMALSHQGLNITQADF
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHEEEECCCEEEECCCEEEECCCCCCCHHHH
DALVGHLIESMKEQHIPLSTRNALLNRLAPMYSDITYH
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SRLLLKLLPVAALFFFTGCAVQTAESSAPQVNLNNGNSSQQTLYQELGGEAGLSAIVDG
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHCCCCCHHHHHHH
LLARIATDPRIVHHFQETDIALFRERAIEHFCLVADGGCVYHGENMALSHQGLNITQADF
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHEEEECCCEEEECCCEEEECCCCCCCHHHH
DALVGHLIESMKEQHIPLSTRNALLNRLAPMYSDITYH
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1609281; 8063099 [H]